RNA–Protein interactions for RNA: ENST00000508343.1

TRIO-211, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 776 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-211ENST00000508343 HIP1RO75146 1068 aa16.64■□□□□ 0.25
TRIO-211ENST00000508343 OFD1O75665 1012 aa16.64■□□□□ 0.25
TRIO-211ENST00000508343 ITGB1P05556 798 aa16.64■□□□□ 0.25
TRIO-211ENST00000508343 LAG3P18627 525 aa16.64■□□□□ 0.25
TRIO-211ENST00000508343 NCLP19338 710 aaKnown RBP16.64■□□□□ 0.25
TRIO-211ENST00000508343 GUCY2CP25092 1073 aa16.64■□□□□ 0.25
TRIO-211ENST00000508343 SLC12A3P55017 1021 aa16.64■□□□□ 0.25
TRIO-211ENST00000508343 SLC39A14Q15043 492 aa16.64■□□□□ 0.25
TRIO-211ENST00000508343 SKIV2LQ15477 1246 aaKnown RBP16.64■□□□□ 0.25
TRIO-211ENST00000508343 CSPP1Q1MSJ5 1256 aa16.64■□□□□ 0.25
TRIO-211ENST00000508343 GLB1LQ6UWU2 654 aa16.64■□□□□ 0.25
TRIO-211ENST00000508343 DAW1Q8N136 415 aa16.64■□□□□ 0.25
TRIO-211ENST00000508343 COLGALT1Q8NBJ5 622 aa16.64■□□□□ 0.25
TRIO-211ENST00000508343 SPPL3Q8TCT6 385 aa16.64■□□□□ 0.25
TRIO-211ENST00000508343 DRC1Q96MC2 740 aa16.64■□□□□ 0.25
TRIO-211ENST00000508343 CCSER1Q9C0I3 900 aa16.64■□□□□ 0.25
TRIO-211ENST00000508343 UBN1Q9NPG3 1134 aa16.64■□□□□ 0.25
TRIO-211ENST00000508343 KCND2Q9NZV8 630 aa16.64■□□□□ 0.25
TRIO-211ENST00000508343 HCSTQ9UBK5 93 aa16.64■□□□□ 0.25
TRIO-211ENST00000508343 FBXO2Q9UK22 296 aaPredicted RBP16.64■□□□□ 0.25
TRIO-211ENST00000508343 MEIS3P2A8K0S8 358 aa16.63■□□□□ 0.25
TRIO-211ENST00000508343 ACKR2O00590 384 aa16.63■□□□□ 0.25
TRIO-211ENST00000508343 ZSCAN22P10073 491 aaPredicted RBP16.63■□□□□ 0.25
TRIO-211ENST00000508343 EFNA5P52803 228 aa16.63■□□□□ 0.25
TRIO-211ENST00000508343 MAPK6Q16659 721 aa16.63■□□□□ 0.25
TRIO-211ENST00000508343 TIGD5Q53EQ6 642 aa16.63■□□□□ 0.25
TRIO-211ENST00000508343 SLC27A1Q6PCB7 646 aa16.63■□□□□ 0.25
TRIO-211ENST00000508343 AGMOQ6ZNB7 445 aa16.63■□□□□ 0.25
TRIO-211ENST00000508343 SMG8Q8ND04 991 aaKnown RBP16.63■□□□□ 0.25
TRIO-211ENST00000508343 RASSF8Q8NHQ8 419 aa16.63■□□□□ 0.25
TRIO-211ENST00000508343 ZNF396Q96N95 335 aaPredicted RBP16.63■□□□□ 0.25
TRIO-211ENST00000508343 EIF2AQ9BY44 585 aaKnown RBP16.63■□□□□ 0.25
TRIO-211ENST00000508343 C17orf75Q9HAS0 396 aa16.63■□□□□ 0.25
TRIO-211ENST00000508343 KCNG1Q9UIX4 513 aa16.63■□□□□ 0.25
TRIO-211ENST00000508343 IPPQ9Y573 584 aa16.63■□□□□ 0.25
TRIO-211ENST00000508343 CNTNAP2Q9UHC6 1331 aa16.63■□□□□ 0.25
TRIO-211ENST00000508343 CCDC169A6NNP5 214 aa16.62■□□□□ 0.25
TRIO-211ENST00000508343 PRKCBP05771 671 aa16.62■□□□□ 0.25
TRIO-211ENST00000508343 ITGA4P13612 1032 aa16.62■□□□□ 0.25
TRIO-211ENST00000508343 NPTX2P47972 431 aa16.62■□□□□ 0.25
TRIO-211ENST00000508343 NASPP49321 788 aaPredicted RBP16.62■□□□□ 0.25
TRIO-211ENST00000508343 PEX3P56589 373 aa16.62■□□□□ 0.25
TRIO-211ENST00000508343 MAPK7Q13164 816 aa16.62■□□□□ 0.25
TRIO-211ENST00000508343 DMP1Q13316 513 aaPredicted RBP16.62■□□□□ 0.25
TRIO-211ENST00000508343 PRPF4BQ13523 1007 aaKnown RBP16.62■□□□□ 0.25
TRIO-211ENST00000508343 CAMK1Q14012 370 aa16.62■□□□□ 0.25
TRIO-211ENST00000508343 KARSQ15046 597 aaKnown RBP16.62■□□□□ 0.25
TRIO-211ENST00000508343 NOMO2Q5JPE7 1267 aa16.62■□□□□ 0.25
TRIO-211ENST00000508343 FOXD4L5Q5VV16 416 aaPredicted RBP16.62■□□□□ 0.25
TRIO-211ENST00000508343 KCNT2Q6UVM3 1135 aa16.62■□□□□ 0.25
TRIO-211ENST00000508343 THNSL1Q8IYQ7 743 aa16.62■□□□□ 0.25
TRIO-211ENST00000508343 POF1BQ8WVV4 589 aa16.62■□□□□ 0.25
TRIO-211ENST00000508343 ATXN2LQ8WWM7 1075 aaKnown RBP16.62■□□□□ 0.25
TRIO-211ENST00000508343 FOXD4L4Q8WXT5 416 aaPredicted RBP16.62■□□□□ 0.25
TRIO-211ENST00000508343 EPSTI1Q96J88 318 aa16.62■□□□□ 0.25
TRIO-211ENST00000508343 ZNF558Q96NG5 402 aa16.62■□□□□ 0.25
TRIO-211ENST00000508343 CLIC6Q96NY7 704 aa16.62■□□□□ 0.25
TRIO-211ENST00000508343 KIFC3Q9BVG8 833 aa16.62■□□□□ 0.25
TRIO-211ENST00000508343 TRIM6Q9C030 488 aaPredicted RBP16.62■□□□□ 0.25
TRIO-211ENST00000508343 CCDC113Q9H0I3 377 aa16.62■□□□□ 0.25
TRIO-211ENST00000508343 RSAD1Q9HA92 442 aa16.62■□□□□ 0.25
TRIO-211ENST00000508343 THEGQ9P2T0 379 aa16.62■□□□□ 0.25
TRIO-211ENST00000508343 COG5Q9UP83 839 aa16.62■□□□□ 0.25
TRIO-211ENST00000508343 INPP5FQ9Y2H2 1132 aa16.62■□□□□ 0.25
TRIO-211ENST00000508343 RBM19Q9Y4C8 960 aaKnown RBP16.62■□□□□ 0.25
TRIO-211ENST00000508343 REV3LO60673 3130 aa16.62■□□□□ 0.25
TRIO-211ENST00000508343 K7ERI5 159 aa16.61■□□□□ 0.25
TRIO-211ENST00000508343 FGF18O76093 207 aa16.61■□□□□ 0.25
TRIO-211ENST00000508343 PLCG1P19174 1290 aa16.61■□□□□ 0.25
TRIO-211ENST00000508343 DNAJB1P25685 340 aa16.61■□□□□ 0.25
TRIO-211ENST00000508343 UBE3AQ05086 875 aa16.61■□□□□ 0.25
TRIO-211ENST00000508343 RAD51AP2Q09MP3 1159 aa16.61■□□□□ 0.25
TRIO-211ENST00000508343 STK38Q15208 465 aa16.61■□□□□ 0.25
TRIO-211ENST00000508343 ARSHQ5FYA8 562 aa16.61■□□□□ 0.25
TRIO-211ENST00000508343 SPECC1Q5M775 1068 aa16.61■□□□□ 0.25
TRIO-211ENST00000508343 USP49Q70CQ1 688 aa16.61■□□□□ 0.25
TRIO-211ENST00000508343 CDR2LQ86X02 465 aaPredicted RBP16.61■□□□□ 0.25
TRIO-211ENST00000508343 HACE1Q8IYU2 909 aa16.61■□□□□ 0.25
TRIO-211ENST00000508343 KRI1Q8N9T8 703 aaKnown RBP16.61■□□□□ 0.25
TRIO-211ENST00000508343 LINC00301Q8NCQ3 95 aa16.61■□□□□ 0.25
TRIO-211ENST00000508343 URGCPQ8TCY9 931 aa16.61■□□□□ 0.25
TRIO-211ENST00000508343 NTPCRQ9BSD7 190 aaKnown RBP16.61■□□□□ 0.25
TRIO-211ENST00000508343 RNF39Q9H2S5 420 aa16.61■□□□□ 0.25
TRIO-211ENST00000508343 NSUN3Q9H649 340 aaKnown RBP16.61■□□□□ 0.25
TRIO-211ENST00000508343 BLOC1S4Q9NUP1 217 aa16.61■□□□□ 0.25
TRIO-211ENST00000508343 TBC1D13Q9NVG8 400 aa16.61■□□□□ 0.25
TRIO-211ENST00000508343 KANSL3Q9P2N6 904 aa16.61■□□□□ 0.25
TRIO-211ENST00000508343 TFIP11Q9UBB9 837 aaKnown RBP16.61■□□□□ 0.25
TRIO-211ENST00000508343 DAXXQ9UER7 740 aaPredicted RBP16.61■□□□□ 0.25
TRIO-211ENST00000508343 CCDC39Q9UFE4 941 aa16.61■□□□□ 0.25
TRIO-211ENST00000508343 MYO7AQ13402 2215 aa16.61■□□□□ 0.25
TRIO-211ENST00000508343 TTLL13PA6NNM8 815 aa16.6■□□□□ 0.25
TRIO-211ENST00000508343 SFI1A8K8P3 1242 aa16.6■□□□□ 0.25
TRIO-211ENST00000508343 N4BP3O15049 544 aa16.6■□□□□ 0.25
TRIO-211ENST00000508343 NPTXRO95502 500 aa16.6■□□□□ 0.25
TRIO-211ENST00000508343 F13A1P00488 732 aa16.6■□□□□ 0.25
TRIO-211ENST00000508343 LIG1P18858 919 aa16.6■□□□□ 0.25
TRIO-211ENST00000508343 DDIT3P35638 169 aa16.6■□□□□ 0.25
TRIO-211ENST00000508343 PPM1AP35813 382 aa16.6■□□□□ 0.25
TRIO-211ENST00000508343 TXLNAP40222 546 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms