RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 C11orf84Q9BUA3 381 aaPredicted RBP3.2□□□□□ -1.9
NEDD4-208ENST00000508342 CLSTN2Q9H4D0 955 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 RETREG1Q9H6L5 497 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 TOPORSQ9NS56 1045 aaPredicted RBP3.2□□□□□ -1.9
NEDD4-208ENST00000508342 PANK4Q9NVE7 773 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 STK39Q9UEW8 545 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 IPO5O00410 1097 aaKnown RBP3.2□□□□□ -1.9
NEDD4-208ENST00000508342 ADCY6O43306 1168 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 NCK2O43639 380 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 DUSP11O75319 330 aaKnown RBP3.2□□□□□ -1.9
NEDD4-208ENST00000508342 LGR5O75473 907 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 KCNA5P22460 613 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 GRM4Q14833 912 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 SLFNL1Q499Z3 407 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 C6orf163Q5TEZ5 329 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 CAVIN1Q6NZI2 390 aaKnown RBP3.2□□□□□ -1.9
NEDD4-208ENST00000508342 TMCO3Q6UWJ1 677 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 NECAB1Q8N987 351 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 SSH3Q8TE77 659 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 PXYLP1Q8TE99 480 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 AFAP1L1Q8TED9 768 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 SCLYQ96I15 445 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 TTC25Q96NG3 672 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 TTC1Q99614 292 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 EPAS1Q99814 870 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 MRIQ9BWK5 157 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 SCAND2PQ9GZW5 306 aaPredicted RBP3.2□□□□□ -1.9
NEDD4-208ENST00000508342 SLC38A7Q9NVC3 462 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 HESX1Q9UBX0 185 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 RASAL2Q9UJF2 1139 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 SDK1Q7Z5N4 2213 aa3.2□□□□□ -1.9
NEDD4-208ENST00000508342 ICE1Q9Y2F5 2266 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 FAM155AB1AL88 458 aaPredicted RBP3.19□□□□□ -1.9
NEDD4-208ENST00000508342 IGF2BP3O00425 579 aaKnown RBP eCLIP3.19□□□□□ -1.9
NEDD4-208ENST00000508342 BAIAP3O94812 1187 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 MOCS3O95396 460 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 OR52Z1P0C646 297 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 ITKQ08881 620 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 E2F5Q15329 346 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 LRRC26Q2I0M4 334 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 TTC38Q5R3I4 469 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 TADA2BQ86TJ2 420 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 PALB2Q86YC2 1186 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 CSGALNACT2Q8N6G5 542 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 HASPINQ8TF76 798 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 RNF139Q8WU17 664 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 SEPT1Q8WYJ6 367 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 NAF1Q96HR8 494 aaKnown RBP3.19□□□□□ -1.9
NEDD4-208ENST00000508342 DDX50Q9BQ39 737 aaKnown RBP3.19□□□□□ -1.9
NEDD4-208ENST00000508342 SELENOOQ9BVL4 669 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 MRPL4Q9BYD3 311 aaKnown RBP3.19□□□□□ -1.9
NEDD4-208ENST00000508342 CCDC68Q9H2F9 335 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 RIC8AQ9NPQ8 531 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 DDX4Q9NQI0 724 aaKnown RBP3.19□□□□□ -1.9
NEDD4-208ENST00000508342 ST7Q9NRC1 585 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 ANO10Q9NW15 660 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.19□□□□□ -1.9
NEDD4-208ENST00000508342 G3BP2Q9UN86 482 aaKnown RBP3.19□□□□□ -1.9
NEDD4-208ENST00000508342 V9GYY5 206 aaPredicted RBP3.19□□□□□ -1.9
NEDD4-208ENST00000508342 A0A0D9SFI3 127 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 TNFRSF10AO00220 468 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 NRIP1P48552 1158 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 LMNB2Q03252 620 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 KIF5AQ12840 1032 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 QRICH1Q2TAL8 776 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 ANO4Q32M45 955 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 ACCSLQ4AC99 568 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 TMTC4Q5T4D3 741 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 TTC19Q6DKK2 380 aaPredicted RBP3.19□□□□□ -1.9
NEDD4-208ENST00000508342 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.19□□□□□ -1.9
NEDD4-208ENST00000508342 SRGAP1Q7Z6B7 1085 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 RGL4Q8IZJ4 473 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 LRRC43Q8N309 656 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 PSPC1Q8WXF1 523 aaKnown RBP3.19□□□□□ -1.9
NEDD4-208ENST00000508342 MRFAP1L1Q96HT8 127 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 MSTO1Q9BUK6 570 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 PRDM12Q9H4Q4 367 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 ZNF576Q9H609 170 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 DCTPP1Q9H773 170 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 FBXO28Q9NVF7 368 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 KCNJ14Q9UNX9 436 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 PLXNA1Q9UIW2 1896 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 ELP1O95163 1332 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 ANKRD33BA6NCL7 494 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 STXBP3O00186 592 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 ZNF263O14978 683 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 SYNCRIPO60506 623 aaKnown RBP3.19□□□□□ -1.9
NEDD4-208ENST00000508342 HEXIM1O94992 359 aaKnown RBP3.19□□□□□ -1.9
NEDD4-208ENST00000508342 RALAP11233 206 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 ODC1P11926 461 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 GBP1P32455 592 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 SLC12A2P55011 1212 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 MYL7Q01449 175 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 TLE2Q04725 743 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 GIT2Q14161 759 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 TMEM132BQ14DG7 1078 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 MAPK6Q16659 721 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 DCAF4L1Q3SXM0 396 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 MAP9Q49MG5 647 aa3.19□□□□□ -1.9
NEDD4-208ENST00000508342 DCUN1D2Q6PH85 259 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms