RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 ZDBF2Q9HCK1 2354 aa14.51□□□□□ -0.09
HMGCS1-205ENST00000508319 POTEMA6NI47 508 aa14.5□□□□□ -0.09
HMGCS1-205ENST00000508319 ASAP2O43150 1006 aa14.5□□□□□ -0.09
HMGCS1-205ENST00000508319 EIF5BO60841 1220 aaKnown RBP14.5□□□□□ -0.09
HMGCS1-205ENST00000508319 GALTP07902 379 aa14.5□□□□□ -0.09
HMGCS1-205ENST00000508319 AFF1P51825 1210 aaKnown RBP14.5□□□□□ -0.09
HMGCS1-205ENST00000508319 MRPL10Q7Z7H8 261 aaKnown RBP14.5□□□□□ -0.09
HMGCS1-205ENST00000508319 MRPL43Q8N983 215 aaKnown RBP14.5□□□□□ -0.09
HMGCS1-205ENST00000508319 TMEM169Q96HH4 297 aa14.5□□□□□ -0.09
HMGCS1-205ENST00000508319 IGSF21Q96ID5 467 aa14.5□□□□□ -0.09
HMGCS1-205ENST00000508319 VN1R3Q9BXE9 311 aa14.5□□□□□ -0.09
HMGCS1-205ENST00000508319 DNAJB4Q9UDY4 337 aa14.5□□□□□ -0.09
HMGCS1-205ENST00000508319 TSPAN1O60635 241 aa14.49□□□□□ -0.09
HMGCS1-205ENST00000508319 CLASP2O75122 1294 aaKnown RBP14.49□□□□□ -0.09
HMGCS1-205ENST00000508319 TXKP42681 527 aa14.49□□□□□ -0.09
HMGCS1-205ENST00000508319 RARRES1P49788 294 aa14.49□□□□□ -0.09
HMGCS1-205ENST00000508319 PTENP60484 403 aa14.49□□□□□ -0.09
HMGCS1-205ENST00000508319 RNASELQ05823 741 aaKnown RBP14.49□□□□□ -0.09
HMGCS1-205ENST00000508319 TRIM29Q14134 588 aa14.49□□□□□ -0.09
HMGCS1-205ENST00000508319 VPS52Q8N1B4 723 aa14.49□□□□□ -0.09
HMGCS1-205ENST00000508319 ASAP3Q8TDY4 903 aa14.49□□□□□ -0.09
HMGCS1-205ENST00000508319 PGBD4Q96DM1 585 aa14.49□□□□□ -0.09
HMGCS1-205ENST00000508319 GBP3Q9H0R5 595 aa14.49□□□□□ -0.09
HMGCS1-205ENST00000508319 TMEM60Q9H2L4 133 aa14.49□□□□□ -0.09
HMGCS1-205ENST00000508319 RSAD1Q9HA92 442 aa14.49□□□□□ -0.09
HMGCS1-205ENST00000508319 ANKEF1Q9NU02 776 aa14.49□□□□□ -0.09
HMGCS1-205ENST00000508319 CDH22Q9UJ99 828 aa14.49□□□□□ -0.09
HMGCS1-205ENST00000508319 CNTNAP2Q9UHC6 1331 aa14.48□□□□□ -0.09
HMGCS1-205ENST00000508319 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.48□□□□□ -0.09
HMGCS1-205ENST00000508319 CARNS1A5YM72 827 aa14.48□□□□□ -0.09
HMGCS1-205ENST00000508319 DGAT1O75907 488 aa14.48□□□□□ -0.09
HMGCS1-205ENST00000508319 ERLIN2O94905 339 aa14.48□□□□□ -0.09
HMGCS1-205ENST00000508319 CTSAP10619 480 aa14.48□□□□□ -0.09
HMGCS1-205ENST00000508319 HOXB8P17481 243 aaPredicted RBP14.48□□□□□ -0.09
HMGCS1-205ENST00000508319 NCLP19338 710 aaKnown RBP14.48□□□□□ -0.09
HMGCS1-205ENST00000508319 ARL2P36404 184 aa14.48□□□□□ -0.09
HMGCS1-205ENST00000508319 SLC11A1P49279 550 aa14.48□□□□□ -0.09
HMGCS1-205ENST00000508319 GUCY1B3Q02153 619 aa14.48□□□□□ -0.09
HMGCS1-205ENST00000508319 MBTD1Q05BQ5 628 aa14.48□□□□□ -0.09
HMGCS1-205ENST00000508319 CAPSQ13938 189 aa14.48□□□□□ -0.09
HMGCS1-205ENST00000508319 MXD4Q14582 209 aaPredicted RBP14.48□□□□□ -0.09
HMGCS1-205ENST00000508319 PCBP1Q15365 356 aaKnown RBP eCLIP14.48□□□□□ -0.09
HMGCS1-205ENST00000508319 HFE2Q6ZVN8 426 aa14.48□□□□□ -0.09
HMGCS1-205ENST00000508319 DDX53Q86TM3 631 aaKnown RBP14.48□□□□□ -0.09
HMGCS1-205ENST00000508319 ZNF280BQ86YH2 543 aa14.48□□□□□ -0.09
HMGCS1-205ENST00000508319 IFNLR1Q8IU57 520 aaPredicted RBP14.48□□□□□ -0.09
HMGCS1-205ENST00000508319 SMG8Q8ND04 991 aaKnown RBP14.48□□□□□ -0.09
HMGCS1-205ENST00000508319 URGCPQ8TCY9 931 aa14.48□□□□□ -0.09
HMGCS1-205ENST00000508319 AUTS2Q8WXX7 1259 aa14.48□□□□□ -0.09
HMGCS1-205ENST00000508319 CASP10Q92851 521 aa14.48□□□□□ -0.09
HMGCS1-205ENST00000508319 RPGRIP1Q96KN7 1286 aa14.48□□□□□ -0.09
HMGCS1-205ENST00000508319 APOL5Q9BWW9 433 aa14.48□□□□□ -0.09
HMGCS1-205ENST00000508319 LIMCH1Q9UPQ0 1083 aa14.48□□□□□ -0.09
HMGCS1-205ENST00000508319 IRAK3Q9Y616 596 aa14.48□□□□□ -0.09
HMGCS1-205ENST00000508319 TDRD15B5MCY1 1934 aaKnown RBP14.48□□□□□ -0.09
HMGCS1-205ENST00000508319 DENND4AQ7Z401 1863 aa14.47□□□□□ -0.09
HMGCS1-205ENST00000508319 INPPL1O15357 1258 aa14.47□□□□□ -0.09
HMGCS1-205ENST00000508319 DDHD2O94830 711 aa14.47□□□□□ -0.09
HMGCS1-205ENST00000508319 SPATA31C1P0DKV0 1188 aa14.47□□□□□ -0.09
HMGCS1-205ENST00000508319 GLRA2P23416 452 aa14.47□□□□□ -0.09
HMGCS1-205ENST00000508319 MCM7P33993 719 aa14.47□□□□□ -0.09
HMGCS1-205ENST00000508319 POU5F1BQ06416 359 aa14.47□□□□□ -0.09
HMGCS1-205ENST00000508319 AMHR2Q16671 573 aa14.47□□□□□ -0.09
HMGCS1-205ENST00000508319 NOTUMQ6P988 496 aa14.47□□□□□ -0.09
HMGCS1-205ENST00000508319 CCDC83Q8IWF9 413 aa14.47□□□□□ -0.09
HMGCS1-205ENST00000508319 PIGOQ8TEQ8 1089 aa14.47□□□□□ -0.09
HMGCS1-205ENST00000508319 EDAQ92838 391 aa14.47□□□□□ -0.09
HMGCS1-205ENST00000508319 EIF2AQ9BY44 585 aaKnown RBP14.47□□□□□ -0.09
HMGCS1-205ENST00000508319 NFKBIZQ9BYH8 718 aa14.47□□□□□ -0.09
HMGCS1-205ENST00000508319 IPPQ9Y573 584 aa14.47□□□□□ -0.09
HMGCS1-205ENST00000508319 CXCL14O95715 111 aa14.46□□□□□ -0.09
HMGCS1-205ENST00000508319 ATP2B1P20020 1258 aa14.46□□□□□ -0.09
HMGCS1-205ENST00000508319 AXLP30530 894 aa14.46□□□□□ -0.09
HMGCS1-205ENST00000508319 CA8P35219 290 aa14.46□□□□□ -0.09
HMGCS1-205ENST00000508319 TFDP1Q14186 410 aa14.46□□□□□ -0.09
HMGCS1-205ENST00000508319 SAFBQ15424 915 aaKnown RBP eCLIP14.46□□□□□ -0.09
HMGCS1-205ENST00000508319 PTPN14Q15678 1187 aa14.46□□□□□ -0.09
HMGCS1-205ENST00000508319 CCDC51Q96ER9 411 aa14.46□□□□□ -0.09
HMGCS1-205ENST00000508319 CPB2Q96IY4 423 aa14.46□□□□□ -0.09
HMGCS1-205ENST00000508319 CCDC43Q96MW1 224 aaKnown RBP14.46□□□□□ -0.09
HMGCS1-205ENST00000508319 KIF2CQ99661 725 aa14.46□□□□□ -0.09
HMGCS1-205ENST00000508319 POLR3FQ9H1D9 316 aaPredicted RBP14.46□□□□□ -0.09
HMGCS1-205ENST00000508319 HES2Q9Y543 173 aa14.46□□□□□ -0.09
HMGCS1-205ENST00000508319 A0A087WWV3 80 aa14.45□□□□□ -0.1
HMGCS1-205ENST00000508319 INO80B-WBP1J3KQ70 363 aa14.45□□□□□ -0.1
HMGCS1-205ENST00000508319 USO1O60763 962 aaKnown RBP14.45□□□□□ -0.1
HMGCS1-205ENST00000508319 MED24O75448 989 aa14.45□□□□□ -0.1
HMGCS1-205ENST00000508319 POMCP01189 267 aa14.45□□□□□ -0.1
HMGCS1-205ENST00000508319 XRCC6P12956 609 aaKnown RBP eCLIP14.45□□□□□ -0.1
HMGCS1-205ENST00000508319 ARF4P18085 180 aaPredicted RBP14.45□□□□□ -0.1
HMGCS1-205ENST00000508319 MLH1P40692 756 aa14.45□□□□□ -0.1
HMGCS1-205ENST00000508319 ZXDAP98168 799 aa14.45□□□□□ -0.1
HMGCS1-205ENST00000508319 ITIH3Q06033 890 aa14.45□□□□□ -0.1
HMGCS1-205ENST00000508319 GIT2Q14161 759 aa14.45□□□□□ -0.1
HMGCS1-205ENST00000508319 BMS1Q14692 1282 aaKnown RBP14.45□□□□□ -0.1
HMGCS1-205ENST00000508319 TPRNQ4KMQ1 711 aa14.45□□□□□ -0.1
HMGCS1-205ENST00000508319 CATSPER3Q86XQ3 398 aa14.45□□□□□ -0.1
HMGCS1-205ENST00000508319 CNNM3Q8NE01 707 aa14.45□□□□□ -0.1
HMGCS1-205ENST00000508319 C8orf76Q96K31 380 aa14.45□□□□□ -0.1
HMGCS1-205ENST00000508319 LLPHQ9BRT6 129 aaKnown RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms