RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 PCBP1Q15365 356 aaKnown RBP eCLIP23.18■■□□□ 1.3
CLDND1-216ENST00000507944 HERC4Q5GLZ8 1057 aaPredicted RBP23.18■■□□□ 1.3
CLDND1-216ENST00000507944 SYCE2Q6PIF2 218 aa23.18■■□□□ 1.3
CLDND1-216ENST00000507944 TMEM173Q86WV6 379 aaPredicted RBP23.18■■□□□ 1.3
CLDND1-216ENST00000507944 URGCPQ8TCY9 931 aa23.18■■□□□ 1.3
CLDND1-216ENST00000507944 PIGOQ8TEQ8 1089 aa23.18■■□□□ 1.3
CLDND1-216ENST00000507944 FAM122AQ96E09 287 aa23.18■■□□□ 1.3
CLDND1-216ENST00000507944 IGSF21Q96ID5 467 aa23.18■■□□□ 1.3
CLDND1-216ENST00000507944 C8orf76Q96K31 380 aa23.18■■□□□ 1.3
CLDND1-216ENST00000507944 CCDC43Q96MW1 224 aaKnown RBP23.18■■□□□ 1.3
CLDND1-216ENST00000507944 LLPHQ9BRT6 129 aaKnown RBP23.18■■□□□ 1.3
CLDND1-216ENST00000507944 RSAD1Q9HA92 442 aa23.18■■□□□ 1.3
CLDND1-216ENST00000507944 A0A087WWV3 80 aa23.17■■□□□ 1.3
CLDND1-216ENST00000507944 POTEMA6NI47 508 aa23.17■■□□□ 1.3
CLDND1-216ENST00000507944 XRCC6P12956 609 aaKnown RBP eCLIP23.17■■□□□ 1.3
CLDND1-216ENST00000507944 HOXB8P17481 243 aaPredicted RBP23.17■■□□□ 1.3
CLDND1-216ENST00000507944 CA8P35219 290 aa23.17■■□□□ 1.3
CLDND1-216ENST00000507944 RARRES1P49788 294 aa23.17■■□□□ 1.3
CLDND1-216ENST00000507944 POU5F1BQ06416 359 aa23.17■■□□□ 1.3
CLDND1-216ENST00000507944 DDX53Q86TM3 631 aaKnown RBP23.17■■□□□ 1.3
CLDND1-216ENST00000507944 ZNF280BQ86YH2 543 aa23.17■■□□□ 1.3
CLDND1-216ENST00000507944 ASAP3Q8TDY4 903 aa23.17■■□□□ 1.3
CLDND1-216ENST00000507944 CASP10Q92851 521 aa23.17■■□□□ 1.3
CLDND1-216ENST00000507944 RPGRIP1Q96KN7 1286 aa23.17■■□□□ 1.3
CLDND1-216ENST00000507944 KANSL3Q9P2N6 904 aa23.17■■□□□ 1.3
CLDND1-216ENST00000507944 DNAJB4Q9UDY4 337 aa23.17■■□□□ 1.3
CLDND1-216ENST00000507944 TECTAO75443 2155 aa23.17■■□□□ 1.3
CLDND1-216ENST00000507944 MUC6Q6W4X9 2439 aa23.17■■□□□ 1.3
CLDND1-216ENST00000507944 CNTNAP2Q9UHC6 1331 aa23.16■■□□□ 1.3
CLDND1-216ENST00000507944 INO80B-WBP1J3KQ70 363 aa23.16■■□□□ 1.3
CLDND1-216ENST00000507944 CLASP2O75122 1294 aaKnown RBP23.16■■□□□ 1.3
CLDND1-216ENST00000507944 CENPBP07199 599 aaPredicted RBP23.16■■□□□ 1.3
CLDND1-216ENST00000507944 NCLP19338 710 aaKnown RBP23.16■■□□□ 1.3
CLDND1-216ENST00000507944 AXLP30530 894 aa23.16■■□□□ 1.3
CLDND1-216ENST00000507944 ARL2P36404 184 aa23.16■■□□□ 1.3
CLDND1-216ENST00000507944 PLA2G5P39877 138 aa23.16■■□□□ 1.3
CLDND1-216ENST00000507944 SLC11A1P49279 550 aa23.16■■□□□ 1.3
CLDND1-216ENST00000507944 NCBP1Q09161 790 aaKnown RBP23.16■■□□□ 1.3
CLDND1-216ENST00000507944 CBX2Q14781 532 aaPredicted RBP23.16■■□□□ 1.3
CLDND1-216ENST00000507944 IFNLR1Q8IU57 520 aaPredicted RBP23.16■■□□□ 1.3
CLDND1-216ENST00000507944 CNNM3Q8NE01 707 aa23.16■■□□□ 1.3
CLDND1-216ENST00000507944 ZSCAN31Q96LW9 406 aaPredicted RBP23.16■■□□□ 1.3
CLDND1-216ENST00000507944 APOL5Q9BWW9 433 aa23.16■■□□□ 1.3
CLDND1-216ENST00000507944 ZBP1Q9H171 429 aa23.16■■□□□ 1.3
CLDND1-216ENST00000507944 HCFC2Q9Y5Z7 792 aa23.16■■□□□ 1.3
CLDND1-216ENST00000507944 TSPAN1O60635 241 aa23.15■■□□□ 1.3
CLDND1-216ENST00000507944 DDHD2O94830 711 aa23.15■■□□□ 1.3
CLDND1-216ENST00000507944 SPATA31C1P0DKV0 1188 aa23.15■■□□□ 1.3
CLDND1-216ENST00000507944 AFF1P51825 1210 aaKnown RBP23.15■■□□□ 1.3
CLDND1-216ENST00000507944 CAPSQ13938 189 aa23.15■■□□□ 1.3
CLDND1-216ENST00000507944 TMEM87AQ8NBN3 555 aa23.15■■□□□ 1.3
CLDND1-216ENST00000507944 SMG8Q8ND04 991 aaKnown RBP23.15■■□□□ 1.3
CLDND1-216ENST00000507944 BCL7CQ8WUZ0 217 aaPredicted RBP23.15■■□□□ 1.3
CLDND1-216ENST00000507944 AUTS2Q8WXX7 1259 aa23.15■■□□□ 1.3
CLDND1-216ENST00000507944 FAM193BQ96PV7 902 aaPredicted RBP23.15■■□□□ 1.3
CLDND1-216ENST00000507944 UBN1Q9NPG3 1134 aa23.15■■□□□ 1.3
CLDND1-216ENST00000507944 B4GALT3O60512 393 aa23.14■■□□□ 1.29
CLDND1-216ENST00000507944 ALDH2P05091 517 aa23.14■■□□□ 1.29
CLDND1-216ENST00000507944 CTSAP10619 480 aa23.14■■□□□ 1.29
CLDND1-216ENST00000507944 ITGA4P13612 1032 aa23.14■■□□□ 1.29
CLDND1-216ENST00000507944 GLRA2P23416 452 aa23.14■■□□□ 1.29
CLDND1-216ENST00000507944 GIT2Q14161 759 aa23.14■■□□□ 1.29
CLDND1-216ENST00000507944 ZNF174Q15697 407 aa23.14■■□□□ 1.29
CLDND1-216ENST00000507944 TPRNQ4KMQ1 711 aa23.14■■□□□ 1.29
CLDND1-216ENST00000507944 NOTUMQ6P988 496 aa23.14■■□□□ 1.29
CLDND1-216ENST00000507944 CATSPER3Q86XQ3 398 aa23.14■■□□□ 1.29
CLDND1-216ENST00000507944 CCDC51Q96ER9 411 aa23.14■■□□□ 1.29
CLDND1-216ENST00000507944 CPB2Q96IY4 423 aa23.14■■□□□ 1.29
CLDND1-216ENST00000507944 EIF2AQ9BY44 585 aaKnown RBP23.14■■□□□ 1.29
CLDND1-216ENST00000507944 FOXP1Q9H334 677 aaPredicted RBP23.14■■□□□ 1.29
CLDND1-216ENST00000507944 TUFT1Q9NNX1 390 aa23.14■■□□□ 1.29
CLDND1-216ENST00000507944 IPPQ9Y573 584 aa23.14■■□□□ 1.29
CLDND1-216ENST00000507944 IRAK3Q9Y616 596 aa23.14■■□□□ 1.29
CLDND1-216ENST00000507944 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.13■■□□□ 1.29
CLDND1-216ENST00000507944 USO1O60763 962 aaKnown RBP23.13■■□□□ 1.29
CLDND1-216ENST00000507944 POMCP01189 267 aa23.13■■□□□ 1.29
CLDND1-216ENST00000507944 HMGN5P82970 282 aaKnown RBP23.13■■□□□ 1.29
CLDND1-216ENST00000507944 MBTD1Q05BQ5 628 aa23.13■■□□□ 1.29
CLDND1-216ENST00000507944 FBXO18Q8NFZ0 1043 aa23.13■■□□□ 1.29
CLDND1-216ENST00000507944 EDAQ92838 391 aa23.13■■□□□ 1.29
CLDND1-216ENST00000507944 TMEM175Q9BSA9 504 aa23.13■■□□□ 1.29
CLDND1-216ENST00000507944 NFKBIZQ9BYH8 718 aa23.13■■□□□ 1.29
CLDND1-216ENST00000507944 CSRNP2Q9H175 543 aa23.13■■□□□ 1.29
CLDND1-216ENST00000507944 POLR3FQ9H1D9 316 aaPredicted RBP23.13■■□□□ 1.29
CLDND1-216ENST00000507944 SH2B1Q9NRF2 756 aaPredicted RBP23.13■■□□□ 1.29
CLDND1-216ENST00000507944 FAN1Q9Y2M0 1017 aa23.13■■□□□ 1.29
CLDND1-216ENST00000507944 MYO10Q9HD67 2058 aa23.13■■□□□ 1.29
CLDND1-216ENST00000507944 MED24O75448 989 aa23.12■■□□□ 1.29
CLDND1-216ENST00000507944 ORC2Q13416 577 aaPredicted RBP23.12■■□□□ 1.29
CLDND1-216ENST00000507944 AMHR2Q16671 573 aa23.12■■□□□ 1.29
CLDND1-216ENST00000507944 FAM184AQ8NB25 1140 aa23.12■■□□□ 1.29
CLDND1-216ENST00000507944 NACC1Q96RE7 527 aa23.12■■□□□ 1.29
CLDND1-216ENST00000507944 KIF2CQ99661 725 aa23.12■■□□□ 1.29
CLDND1-216ENST00000507944 POLR3CQ9BUI4 534 aaPredicted RBP23.12■■□□□ 1.29
CLDND1-216ENST00000507944 VN1R3Q9BXE9 311 aa23.12■■□□□ 1.29
CLDND1-216ENST00000507944 RNF39Q9H2S5 420 aa23.12■■□□□ 1.29
CLDND1-216ENST00000507944 OR52Z1P0C646 297 aa23.11■■□□□ 1.29
CLDND1-216ENST00000507944 ARF4P18085 180 aaPredicted RBP23.11■■□□□ 1.29
CLDND1-216ENST00000507944 RBM25P49756 843 aaKnown RBP23.11■■□□□ 1.29
CLDND1-216ENST00000507944 GNL2Q13823 731 aaKnown RBP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms