RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 CD33P20138 364 aa7.94□□□□□ -1.14
CLCN3-206ENST00000507875 PURAQ00577 322 aaKnown RBP7.94□□□□□ -1.14
CLCN3-206ENST00000507875 NFIAQ12857 509 aa7.94□□□□□ -1.14
CLCN3-206ENST00000507875 KIF4BQ2VIQ3 1234 aa7.94□□□□□ -1.14
CLCN3-206ENST00000507875 SLC4A8Q2Y0W8 1093 aa7.94□□□□□ -1.14
CLCN3-206ENST00000507875 LRSAM1Q6UWE0 723 aa7.94□□□□□ -1.14
CLCN3-206ENST00000507875 SCUBE1Q8IWY4 988 aa7.94□□□□□ -1.14
CLCN3-206ENST00000507875 ADCY4Q8NFM4 1077 aa7.94□□□□□ -1.14
CLCN3-206ENST00000507875 BSNDQ8WZ55 320 aa7.94□□□□□ -1.14
CLCN3-206ENST00000507875 USP7Q93009 1102 aa7.94□□□□□ -1.14
CLCN3-206ENST00000507875 SYAP1Q96A49 352 aaPredicted RBP7.94□□□□□ -1.14
CLCN3-206ENST00000507875 DYNLL2Q96FJ2 89 aa7.94□□□□□ -1.14
CLCN3-206ENST00000507875 RETREG1Q9H6L5 497 aa7.94□□□□□ -1.14
CLCN3-206ENST00000507875 ZFYVE1Q9HBF4 777 aa7.94□□□□□ -1.14
CLCN3-206ENST00000507875 CABP5Q9NP86 173 aa7.94□□□□□ -1.14
CLCN3-206ENST00000507875 CNPY2Q9Y2B0 182 aa7.94□□□□□ -1.14
CLCN3-206ENST00000507875 BICDL2A1A5D9 508 aa7.93□□□□□ -1.14
CLCN3-206ENST00000507875 SYCE3A1L190 88 aa7.93□□□□□ -1.14
CLCN3-206ENST00000507875 hCG_1984214I3L0E3 225 aa7.93□□□□□ -1.14
CLCN3-206ENST00000507875 DEXIO95424 95 aa7.93□□□□□ -1.14
CLCN3-206ENST00000507875 TTLL1O95922 423 aa7.93□□□□□ -1.14
CLCN3-206ENST00000507875 XBP1P17861 261 aa7.93□□□□□ -1.14
CLCN3-206ENST00000507875 HALP42357 657 aa7.93□□□□□ -1.14
CLCN3-206ENST00000507875 TROAPQ12815 778 aa7.93□□□□□ -1.14
CLCN3-206ENST00000507875 STK3Q13188 491 aa7.93□□□□□ -1.14
CLCN3-206ENST00000507875 NTRK3Q16288 839 aa7.93□□□□□ -1.14
CLCN3-206ENST00000507875 CERKLQ49MI3 558 aaPredicted RBP7.93□□□□□ -1.14
CLCN3-206ENST00000507875 ASPRV1Q53RT3 343 aa7.93□□□□□ -1.14
CLCN3-206ENST00000507875 C16orf87Q6PH81 154 aa7.93□□□□□ -1.14
CLCN3-206ENST00000507875 CCDC174Q6PII3 467 aa7.93□□□□□ -1.14
CLCN3-206ENST00000507875 ZNF713Q8N859 430 aaPredicted RBP7.93□□□□□ -1.14
CLCN3-206ENST00000507875 IL17RBQ9NRM6 502 aa7.93□□□□□ -1.14
CLCN3-206ENST00000507875 MTMR4Q9NYA4 1195 aa7.93□□□□□ -1.14
CLCN3-206ENST00000507875 PGAP2Q9UHJ9 254 aa7.93□□□□□ -1.14
CLCN3-206ENST00000507875 PAPPA2Q9BXP8 1791 aa7.93□□□□□ -1.14
CLCN3-206ENST00000507875 DDTLA6NHG4 134 aaPredicted RBP7.93□□□□□ -1.14
CLCN3-206ENST00000507875 TNFRSF10AO00220 468 aa7.93□□□□□ -1.14
CLCN3-206ENST00000507875 TNFRSF10CO14798 259 aa7.93□□□□□ -1.14
CLCN3-206ENST00000507875 DTNBO60941 627 aa7.93□□□□□ -1.14
CLCN3-206ENST00000507875 CTDNEP1O95476 244 aa7.93□□□□□ -1.14
CLCN3-206ENST00000507875 CAPNS1P04632 268 aa7.93□□□□□ -1.14
CLCN3-206ENST00000507875 CTSBP07858 339 aa7.93□□□□□ -1.14
CLCN3-206ENST00000507875 CPEP16870 476 aa7.93□□□□□ -1.14
CLCN3-206ENST00000507875 TBC1D8BQ0IIM8 1120 aa7.93□□□□□ -1.14
CLCN3-206ENST00000507875 DNAJC21Q5F1R6 531 aaKnown RBP7.93□□□□□ -1.14
CLCN3-206ENST00000507875 DNTTIP2Q5QJE6 756 aaKnown RBP7.93□□□□□ -1.14
CLCN3-206ENST00000507875 C12orf40Q86WS4 652 aa7.93□□□□□ -1.14
CLCN3-206ENST00000507875 CHCHD4Q8N4Q1 142 aa7.93□□□□□ -1.14
CLCN3-206ENST00000507875 KIAA1958Q8N8K9 716 aa7.93□□□□□ -1.14
CLCN3-206ENST00000507875 TAF4BQ92750 862 aa7.93□□□□□ -1.14
CLCN3-206ENST00000507875 FUBP3Q96I24 572 aaKnown RBP eCLIP7.93□□□□□ -1.14
CLCN3-206ENST00000507875 TSEN34Q9BSV6 310 aaKnown RBP7.93□□□□□ -1.14
CLCN3-206ENST00000507875 SH2D4AQ9H788 454 aa7.93□□□□□ -1.14
CLCN3-206ENST00000507875 INCENPQ9NQS7 918 aa7.93□□□□□ -1.14
CLCN3-206ENST00000507875 SH3GLB2Q9NR46 395 aa7.93□□□□□ -1.14
CLCN3-206ENST00000507875 ABT1Q9ULW3 272 aaKnown RBP7.93□□□□□ -1.14
CLCN3-206ENST00000507875 TRIM33Q9UPN9 1127 aa7.93□□□□□ -1.14
CLCN3-206ENST00000507875 SYNRGQ9UMZ2 1314 aa7.93□□□□□ -1.14
CLCN3-206ENST00000507875 CCDC163A0A0D9SF12 145 aa7.92□□□□□ -1.14
CLCN3-206ENST00000507875 VPS37CA5D8V6 355 aaPredicted RBP7.92□□□□□ -1.14
CLCN3-206ENST00000507875 PRDM1O75626 825 aa7.92□□□□□ -1.14
CLCN3-206ENST00000507875 MAPTP10636 758 aaKnown RBP7.92□□□□□ -1.14
CLCN3-206ENST00000507875 RBP3P10745 1247 aa7.92□□□□□ -1.14
CLCN3-206ENST00000507875 ESRRAP11474 423 aaPredicted RBP7.92□□□□□ -1.14
CLCN3-206ENST00000507875 BMP2P12643 396 aa7.92□□□□□ -1.14
CLCN3-206ENST00000507875 POU3F2P20265 443 aaPredicted RBP7.92□□□□□ -1.14
CLCN3-206ENST00000507875 UBE2HP62256 183 aa7.92□□□□□ -1.14
CLCN3-206ENST00000507875 AKAP17AQ02040 695 aaKnown RBP7.92□□□□□ -1.14
CLCN3-206ENST00000507875 CCDC173Q0VFZ6 552 aa7.92□□□□□ -1.14
CLCN3-206ENST00000507875 TRIM61Q5EBN2 209 aa7.92□□□□□ -1.14
CLCN3-206ENST00000507875 FAM47AQ5JRC9 791 aa7.92□□□□□ -1.14
CLCN3-206ENST00000507875 TMTC3Q6ZXV5 915 aa7.92□□□□□ -1.14
CLCN3-206ENST00000507875 CDC37L1Q7L3B6 337 aa7.92□□□□□ -1.14
CLCN3-206ENST00000507875 TAB3Q8N5C8 712 aaPredicted RBP7.92□□□□□ -1.14
CLCN3-206ENST00000507875 GSTCDQ8NEC7 633 aa7.92□□□□□ -1.14
CLCN3-206ENST00000507875 DCAF4Q8WV16 495 aa7.92□□□□□ -1.14
CLCN3-206ENST00000507875 IFT22Q9H7X7 185 aa7.92□□□□□ -1.14
CLCN3-206ENST00000507875 ORC3Q9UBD5 711 aaPredicted RBP7.92□□□□□ -1.14
CLCN3-206ENST00000507875 H3BQV1 296 aa7.92□□□□□ -1.14
CLCN3-206ENST00000507875 SOD2P04179 222 aa7.92□□□□□ -1.14
CLCN3-206ENST00000507875 GSTP1P09211 210 aaKnown RBP7.92□□□□□ -1.14
CLCN3-206ENST00000507875 SNHG28P0DPA3 235 aa7.92□□□□□ -1.14
CLCN3-206ENST00000507875 BPIP17213 487 aa7.92□□□□□ -1.14
CLCN3-206ENST00000507875 ERVK-21P61565 698 aa7.92□□□□□ -1.14
CLCN3-206ENST00000507875 TRAF1Q13077 416 aa7.92□□□□□ -1.14
CLCN3-206ENST00000507875 TRIM29Q14134 588 aa7.92□□□□□ -1.14
CLCN3-206ENST00000507875 UBAP2LQ14157 1087 aaKnown RBP7.92□□□□□ -1.14
CLCN3-206ENST00000507875 DEFB115Q30KQ5 88 aa7.92□□□□□ -1.14
CLCN3-206ENST00000507875 ARHGAP29Q52LW3 1261 aa7.92□□□□□ -1.14
CLCN3-206ENST00000507875 GPATCH4Q5T3I0 446 aaKnown RBP7.92□□□□□ -1.14
CLCN3-206ENST00000507875 IFFO2Q5TF58 517 aa7.92□□□□□ -1.14
CLCN3-206ENST00000507875 CDCP2Q5VXM1 449 aa7.92□□□□□ -1.14
CLCN3-206ENST00000507875 TXNDC11Q6PKC3 985 aa7.92□□□□□ -1.14
CLCN3-206ENST00000507875 MICU3Q86XE3 530 aa7.92□□□□□ -1.14
CLCN3-206ENST00000507875 GMCL1P1Q8NEA9 526 aa7.92□□□□□ -1.14
CLCN3-206ENST00000507875 ACSF2Q96CM8 615 aaPredicted RBP7.92□□□□□ -1.14
CLCN3-206ENST00000507875 CLIP3Q96DZ5 547 aa7.92□□□□□ -1.14
CLCN3-206ENST00000507875 PPP1R9BQ96SB3 815 aa7.92□□□□□ -1.14
CLCN3-206ENST00000507875 TMEM47Q9BQJ4 181 aa7.92□□□□□ -1.14
CLCN3-206ENST00000507875 SPZ1Q9BXG8 430 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms