RNA–Protein interactions for RNA: ENST00000507376.1

COPS4-205, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5

Gene COPS4, Length 438 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-205ENST00000507376 KSR1Q8IVT5 923 aa10.1□□□□□ -0.79
COPS4-205ENST00000507376 FGF14Q92915 247 aa10.1□□□□□ -0.79
COPS4-205ENST00000507376 SCLT1Q96NL6 688 aa10.1□□□□□ -0.79
COPS4-205ENST00000507376 NCDNQ9UBB6 729 aa10.1□□□□□ -0.79
COPS4-205ENST00000507376 GABBR1Q9UBS5 961 aa10.1□□□□□ -0.79
COPS4-205ENST00000507376 WNT16Q9UBV4 365 aa10.1□□□□□ -0.79
COPS4-205ENST00000507376 SMG5Q9UPR3 1016 aaKnown RBP10.1□□□□□ -0.79
COPS4-205ENST00000507376 PRG3Q9Y2Y8 225 aaPredicted RBP10.1□□□□□ -0.79
COPS4-205ENST00000507376 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.1□□□□□ -0.79
COPS4-205ENST00000507376 CEP295Q9C0D2 2601 aa10.09□□□□□ -0.79
COPS4-205ENST00000507376 IGF2RP11717 2491 aa10.09□□□□□ -0.79
COPS4-205ENST00000507376 CCDC195A0A1B0GUA6 201 aa10.09□□□□□ -0.79
COPS4-205ENST00000507376 ERICH2A1L162 156 aa10.09□□□□□ -0.79
COPS4-205ENST00000507376 TEX28O15482 410 aa10.09□□□□□ -0.79
COPS4-205ENST00000507376 PRC1O43663 620 aa10.09□□□□□ -0.79
COPS4-205ENST00000507376 FECHP22830 423 aa10.09□□□□□ -0.79
COPS4-205ENST00000507376 PHKA2P46019 1235 aa10.09□□□□□ -0.79
COPS4-205ENST00000507376 NT5C2P49902 561 aa10.09□□□□□ -0.79
COPS4-205ENST00000507376 PRKCEQ02156 737 aa10.09□□□□□ -0.79
COPS4-205ENST00000507376 TRDNQ13061 729 aa10.09□□□□□ -0.79
COPS4-205ENST00000507376 VARS2Q5ST30 1063 aaKnown RBP10.09□□□□□ -0.79
COPS4-205ENST00000507376 JAKMIP3Q5VZ66 844 aa10.09□□□□□ -0.79
COPS4-205ENST00000507376 FAM160B1Q5W0V3 765 aa10.09□□□□□ -0.79
COPS4-205ENST00000507376 PARM1Q6UWI2 310 aa10.09□□□□□ -0.79
COPS4-205ENST00000507376 CHD1LQ86WJ1 897 aa10.09□□□□□ -0.79
COPS4-205ENST00000507376 PLA2G4DQ86XP0 818 aa10.09□□□□□ -0.79
COPS4-205ENST00000507376 SMC5Q8IY18 1101 aa10.09□□□□□ -0.79
COPS4-205ENST00000507376 NCOA7Q8NI08 942 aa10.09□□□□□ -0.79
COPS4-205ENST00000507376 SMG7Q92540 1137 aaKnown RBP10.09□□□□□ -0.79
COPS4-205ENST00000507376 RABGGTAQ92696 567 aa10.09□□□□□ -0.79
COPS4-205ENST00000507376 TCEANC2Q96MN5 208 aa10.09□□□□□ -0.79
COPS4-205ENST00000507376 MRPL9Q9BYD2 267 aaKnown RBP10.09□□□□□ -0.79
COPS4-205ENST00000507376 WDR6Q9NNW5 1121 aaKnown RBP10.09□□□□□ -0.79
COPS4-205ENST00000507376 IGSF9Q9P2J2 1179 aa10.09□□□□□ -0.79
COPS4-205ENST00000507376 EPS15L1Q9UBC2 864 aa10.09□□□□□ -0.79
COPS4-205ENST00000507376 SIT1Q9Y3P8 196 aa10.09□□□□□ -0.79
COPS4-205ENST00000507376 FAM208BQ5VWN6 2430 aa10.09□□□□□ -0.79
COPS4-205ENST00000507376 TDRD15B5MCY1 1934 aaKnown RBP10.09□□□□□ -0.79
COPS4-205ENST00000507376 ARID2Q68CP9 1835 aa10.08□□□□□ -0.8
COPS4-205ENST00000507376 VWA8A3KMH1 1905 aa10.08□□□□□ -0.8
COPS4-205ENST00000507376 SHISA7A6NL88 538 aa10.08□□□□□ -0.8
COPS4-205ENST00000507376 KINO60870 393 aaKnown RBP10.08□□□□□ -0.8
COPS4-205ENST00000507376 OFD1O75665 1012 aa10.08□□□□□ -0.8
COPS4-205ENST00000507376 POMCP01189 267 aa10.08□□□□□ -0.8
COPS4-205ENST00000507376 ADRB1P08588 477 aa10.08□□□□□ -0.8
COPS4-205ENST00000507376 ZSCAN20P17040 1043 aaPredicted RBP10.08□□□□□ -0.8
COPS4-205ENST00000507376 SREBF1P36956 1147 aa10.08□□□□□ -0.8
COPS4-205ENST00000507376 AK2P54819 239 aa10.08□□□□□ -0.8
COPS4-205ENST00000507376 NAPAP54920 295 aa10.08□□□□□ -0.8
COPS4-205ENST00000507376 GPC5P78333 572 aa10.08□□□□□ -0.8
COPS4-205ENST00000507376 CSTF1Q05048 431 aaKnown RBP10.08□□□□□ -0.8
COPS4-205ENST00000507376 SNW1Q13573 536 aaKnown RBP10.08□□□□□ -0.8
COPS4-205ENST00000507376 COL9A2Q14055 689 aaPredicted RBP10.08□□□□□ -0.8
COPS4-205ENST00000507376 NOMO2Q5JPE7 1267 aa10.08□□□□□ -0.8
COPS4-205ENST00000507376 TWF2Q6IBS0 349 aaKnown RBP10.08□□□□□ -0.8
COPS4-205ENST00000507376 MIS18BP1Q6P0N0 1132 aa10.08□□□□□ -0.8
COPS4-205ENST00000507376 DCLRE1AQ6PJP8 1040 aa10.08□□□□□ -0.8
COPS4-205ENST00000507376 AGMOQ6ZNB7 445 aa10.08□□□□□ -0.8
COPS4-205ENST00000507376 TMEM87AQ8NBN3 555 aa10.08□□□□□ -0.8
COPS4-205ENST00000507376 NLRP7Q8WX94 980 aa10.08□□□□□ -0.8
COPS4-205ENST00000507376 MAP7D2Q96T17 732 aa10.08□□□□□ -0.8
COPS4-205ENST00000507376 OSBPL3Q9H4L5 887 aa10.08□□□□□ -0.8
COPS4-205ENST00000507376 SPATA6Q9NWH7 488 aaPredicted RBP10.08□□□□□ -0.8
COPS4-205ENST00000507376 USP18Q9UMW8 372 aa10.08□□□□□ -0.8
COPS4-205ENST00000507376 PIN4Q9Y237 131 aaKnown RBP10.08□□□□□ -0.8
COPS4-205ENST00000507376 MAFBQ9Y5Q3 323 aaPredicted RBP10.08□□□□□ -0.8
COPS4-205ENST00000507376 A0A087WZ62 844 aa10.07□□□□□ -0.8
COPS4-205ENST00000507376 ANHXE9PGG2 379 aa10.07□□□□□ -0.8
COPS4-205ENST00000507376 IPO5O00410 1097 aaKnown RBP10.07□□□□□ -0.8
COPS4-205ENST00000507376 NRG2O14511 850 aaPredicted RBP10.07□□□□□ -0.8
COPS4-205ENST00000507376 CHMP2AO43633 222 aa10.07□□□□□ -0.8
COPS4-205ENST00000507376 EDIL3O43854 480 aa10.07□□□□□ -0.8
COPS4-205ENST00000507376 CLK2P49760 499 aaKnown RBP10.07□□□□□ -0.8
COPS4-205ENST00000507376 SLC26A2P50443 739 aa10.07□□□□□ -0.8
COPS4-205ENST00000507376 ADCY7P51828 1080 aa10.07□□□□□ -0.8
COPS4-205ENST00000507376 POLGP54098 1239 aaPredicted RBP10.07□□□□□ -0.8
COPS4-205ENST00000507376 NUCB1Q02818 461 aa10.07□□□□□ -0.8
COPS4-205ENST00000507376 FUT2Q10981 343 aa10.07□□□□□ -0.8
COPS4-205ENST00000507376 MCM6Q14566 821 aa10.07□□□□□ -0.8
COPS4-205ENST00000507376 UBXN2BQ14CS0 331 aa10.07□□□□□ -0.8
COPS4-205ENST00000507376 ZC3H14Q6PJT7 736 aaKnown RBP10.07□□□□□ -0.8
COPS4-205ENST00000507376 NFXL1Q6ZNB6 911 aa10.07□□□□□ -0.8
COPS4-205ENST00000507376 CRYGNQ8WXF5 182 aa10.07□□□□□ -0.8
COPS4-205ENST00000507376 LENG9Q96B70 501 aa10.07□□□□□ -0.8
COPS4-205ENST00000507376 CEP89Q96ST8 783 aa10.07□□□□□ -0.8
COPS4-205ENST00000507376 KXD1Q9BQD3 176 aa10.07□□□□□ -0.8
COPS4-205ENST00000507376 FDXACB1Q9BRP7 624 aaPredicted RBP10.07□□□□□ -0.8
COPS4-205ENST00000507376 SEMA4AQ9H3S1 761 aa10.07□□□□□ -0.8
COPS4-205ENST00000507376 RIC8AQ9NPQ8 531 aa10.07□□□□□ -0.8
COPS4-205ENST00000507376 FAM105AQ9NUU6 356 aa10.07□□□□□ -0.8
COPS4-205ENST00000507376 CDV3Q9UKY7 258 aaKnown RBP10.07□□□□□ -0.8
COPS4-205ENST00000507376 RBM8AQ9Y5S9 174 aaKnown RBP10.07□□□□□ -0.8
COPS4-205ENST00000507376 SPEGQ15772 3267 aa10.07□□□□□ -0.8
COPS4-205ENST00000507376 FASNP49327 2511 aaKnown RBP10.06□□□□□ -0.8
COPS4-205ENST00000507376 TICRRQ7Z2Z1 1910 aa10.06□□□□□ -0.8
COPS4-205ENST00000507376 NRP1O14786 923 aa10.06□□□□□ -0.8
COPS4-205ENST00000507376 MAFGO15525 162 aa10.06□□□□□ -0.8
COPS4-205ENST00000507376 GDF9O60383 454 aa10.06□□□□□ -0.8
COPS4-205ENST00000507376 OATP04181 439 aa10.06□□□□□ -0.8
COPS4-205ENST00000507376 LAMP2P13473 410 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms