RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 TBX21Q9UL17 535 aa15.59■□□□□ 0.09
RNF4-208ENST00000507247 TISP43B9A030 160 aa15.58■□□□□ 0.08
RNF4-208ENST00000507247 TGFB1I1O43294 461 aa15.58■□□□□ 0.08
RNF4-208ENST00000507247 CLTBP09497 229 aa15.58■□□□□ 0.08
RNF4-208ENST00000507247 EIF4BP23588 611 aaKnown RBP15.58■□□□□ 0.08
RNF4-208ENST00000507247 STX17P56962 302 aa15.58■□□□□ 0.08
RNF4-208ENST00000507247 BFSP2Q13515 415 aa15.58■□□□□ 0.08
RNF4-208ENST00000507247 STIM1Q13586 685 aa15.58■□□□□ 0.08
RNF4-208ENST00000507247 MAPK6Q16659 721 aa15.58■□□□□ 0.08
RNF4-208ENST00000507247 FAM187BQ17R55 369 aa15.58■□□□□ 0.08
RNF4-208ENST00000507247 KNOP1Q1ED39 458 aaKnown RBP15.58■□□□□ 0.08
RNF4-208ENST00000507247 SLC39A4Q6P5W5 647 aa15.58■□□□□ 0.08
RNF4-208ENST00000507247 CCDC155Q8N6L0 562 aa15.58■□□□□ 0.08
RNF4-208ENST00000507247 P2RX5Q93086 422 aa15.58■□□□□ 0.08
RNF4-208ENST00000507247 DHTKD1Q96HY7 919 aaPredicted RBP15.58■□□□□ 0.08
RNF4-208ENST00000507247 TSPY26PQ9H489 355 aa15.58■□□□□ 0.08
RNF4-208ENST00000507247 NOC2LQ9Y3T9 749 aaKnown RBP15.58■□□□□ 0.08
RNF4-208ENST00000507247 ANKRD63C9JTQ0 380 aa15.57■□□□□ 0.08
RNF4-208ENST00000507247 PITPNM1O00562 1244 aa15.57■□□□□ 0.08
RNF4-208ENST00000507247 PSMA7O14818 248 aa15.57■□□□□ 0.08
RNF4-208ENST00000507247 B4GALT5O43286 388 aa15.57■□□□□ 0.08
RNF4-208ENST00000507247 KIF20AO95235 890 aa15.57■□□□□ 0.08
RNF4-208ENST00000507247 PIGRP01833 764 aa15.57■□□□□ 0.08
RNF4-208ENST00000507247 SELPP16109 830 aa15.57■□□□□ 0.08
RNF4-208ENST00000507247 SCP2P22307 547 aa15.57■□□□□ 0.08
RNF4-208ENST00000507247 CCNE1P24864 410 aa15.57■□□□□ 0.08
RNF4-208ENST00000507247 PPP1R2P41236 205 aa15.57■□□□□ 0.08
RNF4-208ENST00000507247 STRN3Q13033 797 aa15.57■□□□□ 0.08
RNF4-208ENST00000507247 PAK1Q13153 545 aa15.57■□□□□ 0.08
RNF4-208ENST00000507247 MBTPS1Q14703 1052 aa15.57■□□□□ 0.08
RNF4-208ENST00000507247 ZCWPW2Q504Y3 356 aa15.57■□□□□ 0.08
RNF4-208ENST00000507247 FBXO47Q5MNV8 452 aa15.57■□□□□ 0.08
RNF4-208ENST00000507247 CENPPQ6IPU0 288 aa15.57■□□□□ 0.08
RNF4-208ENST00000507247 PPP4R3CPQ6ZMV5 832 aa15.57■□□□□ 0.08
RNF4-208ENST00000507247 LRRC8DQ7L1W4 858 aa15.57■□□□□ 0.08
RNF4-208ENST00000507247 FAM228AQ86W67 206 aa15.57■□□□□ 0.08
RNF4-208ENST00000507247 TARS2Q9BW92 718 aaKnown RBP15.57■□□□□ 0.08
RNF4-208ENST00000507247 PPP1R12CQ9BZL4 782 aa15.57■□□□□ 0.08
RNF4-208ENST00000507247 HIPK3Q9H422 1215 aa15.57■□□□□ 0.08
RNF4-208ENST00000507247 TMEM206Q9H813 350 aa15.57■□□□□ 0.08
RNF4-208ENST00000507247 PRMT7Q9NVM4 692 aaPredicted RBP15.57■□□□□ 0.08
RNF4-208ENST00000507247 DACH1Q9UI36 760 aa15.57■□□□□ 0.08
RNF4-208ENST00000507247 ACKR2O00590 384 aa15.56■□□□□ 0.08
RNF4-208ENST00000507247 TSPAN1O60635 241 aa15.56■□□□□ 0.08
RNF4-208ENST00000507247 SLC34A2O95436 690 aa15.56■□□□□ 0.08
RNF4-208ENST00000507247 GHRP10912 638 aa15.56■□□□□ 0.08
RNF4-208ENST00000507247 ABCD1P33897 745 aa15.56■□□□□ 0.08
RNF4-208ENST00000507247 LPIN1Q14693 890 aa15.56■□□□□ 0.08
RNF4-208ENST00000507247 ANKRD40Q6AI12 368 aa15.56■□□□□ 0.08
RNF4-208ENST00000507247 TTI2Q6NXR4 508 aa15.56■□□□□ 0.08
RNF4-208ENST00000507247 GAS2L3Q86XJ1 694 aa15.56■□□□□ 0.08
RNF4-208ENST00000507247 SYCP3Q8IZU3 236 aa15.56■□□□□ 0.08
RNF4-208ENST00000507247 CPB2Q96IY4 423 aa15.56■□□□□ 0.08
RNF4-208ENST00000507247 ACO2Q99798 780 aaKnown RBP15.56■□□□□ 0.08
RNF4-208ENST00000507247 ANP32EQ9BTT0 268 aa15.56■□□□□ 0.08
RNF4-208ENST00000507247 GBP3Q9H0R5 595 aa15.56■□□□□ 0.08
RNF4-208ENST00000507247 WNT8AQ9H1J5 351 aa15.56■□□□□ 0.08
RNF4-208ENST00000507247 AGO3Q9H9G7 860 aaKnown RBP15.56■□□□□ 0.08
RNF4-208ENST00000507247 TMEM39AQ9NV64 488 aa15.56■□□□□ 0.08
RNF4-208ENST00000507247 TYW1Q9NV66 732 aaKnown RBP15.56■□□□□ 0.08
RNF4-208ENST00000507247 RWDD2AQ9UIY3 292 aa15.56■□□□□ 0.08
RNF4-208ENST00000507247 EXOC7Q9UPT5 735 aa15.56■□□□□ 0.08
RNF4-208ENST00000507247 CNTNAP2Q9UHC6 1331 aa15.56■□□□□ 0.08
RNF4-208ENST00000507247 TET1Q8NFU7 2136 aa15.55■□□□□ 0.08
RNF4-208ENST00000507247 TRIM43BA6NCK2 446 aa15.55■□□□□ 0.08
RNF4-208ENST00000507247 PDXKO00764 312 aa15.55■□□□□ 0.08
RNF4-208ENST00000507247 HNRNPDLO14979 420 aaKnown RBP15.55■□□□□ 0.08
RNF4-208ENST00000507247 RPS6KA5O75582 802 aa15.55■□□□□ 0.08
RNF4-208ENST00000507247 ERLIN2O94905 339 aa15.55■□□□□ 0.08
RNF4-208ENST00000507247 ARF4P18085 180 aaPredicted RBP15.55■□□□□ 0.08
RNF4-208ENST00000507247 SFPQP23246 707 aaKnown RBP eCLIP15.55■□□□□ 0.08
RNF4-208ENST00000507247 ERCC5P28715 1186 aaPredicted RBP15.55■□□□□ 0.08
RNF4-208ENST00000507247 CYP2C18P33260 490 aa15.55■□□□□ 0.08
RNF4-208ENST00000507247 ZNF165P49910 485 aa15.55■□□□□ 0.08
RNF4-208ENST00000507247 PRPF4BQ13523 1007 aaKnown RBP15.55■□□□□ 0.08
RNF4-208ENST00000507247 GPNMBQ14956 572 aa15.55■□□□□ 0.08
RNF4-208ENST00000507247 CT47A1Q5JQC4 288 aaPredicted RBP15.55■□□□□ 0.08
RNF4-208ENST00000507247 CATSPER4Q7RTX7 472 aa15.55■□□□□ 0.08
RNF4-208ENST00000507247 CDR2LQ86X02 465 aaPredicted RBP15.55■□□□□ 0.08
RNF4-208ENST00000507247 TRIM43Q96BQ3 446 aaPredicted RBP15.55■□□□□ 0.08
RNF4-208ENST00000507247 BICD1Q96G01 975 aa15.55■□□□□ 0.08
RNF4-208ENST00000507247 ZBTB45Q96K62 511 aaPredicted RBP15.55■□□□□ 0.08
RNF4-208ENST00000507247 PRIMPOLQ96LW4 560 aa15.55■□□□□ 0.08
RNF4-208ENST00000507247 DUSP9Q99956 384 aaKnown RBP15.55■□□□□ 0.08
RNF4-208ENST00000507247 MRPL4Q9BYD3 311 aaKnown RBP15.55■□□□□ 0.08
RNF4-208ENST00000507247 HAPLN2Q9GZV7 340 aa15.55■□□□□ 0.08
RNF4-208ENST00000507247 CBX8Q9HC52 389 aa15.55■□□□□ 0.08
RNF4-208ENST00000507247 AGPAT3Q9NRZ7 376 aa15.55■□□□□ 0.08
RNF4-208ENST00000507247 PCDH10Q9P2E7 1040 aa15.55■□□□□ 0.08
RNF4-208ENST00000507247 TRAF3IP3Q9Y228 551 aa15.55■□□□□ 0.08
RNF4-208ENST00000507247 LTBP2Q14767 1821 aa15.54■□□□□ 0.08
RNF4-208ENST00000507247 ABLIM1O14639 778 aa15.54■□□□□ 0.08
RNF4-208ENST00000507247 KIAA0355O15063 1070 aa15.54■□□□□ 0.08
RNF4-208ENST00000507247 CLIC2O15247 247 aa15.54■□□□□ 0.08
RNF4-208ENST00000507247 NBNO60934 754 aa15.54■□□□□ 0.08
RNF4-208ENST00000507247 ITGB8P26012 769 aa15.54■□□□□ 0.08
RNF4-208ENST00000507247 ADSSP30520 456 aa15.54■□□□□ 0.08
RNF4-208ENST00000507247 HOXA11P31270 313 aaPredicted RBP15.54■□□□□ 0.08
RNF4-208ENST00000507247 CD52P31358 61 aa15.54■□□□□ 0.08
RNF4-208ENST00000507247 LIG4P49917 911 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms