RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 TBC1D13Q9NVG8 400 aa16.05■□□□□ 0.16
HMGCS1-203ENST00000507004 USP15Q9Y4E8 981 aaPredicted RBP16.05■□□□□ 0.16
HMGCS1-203ENST00000507004 FAM205CA6NFA0 338 aa16.04■□□□□ 0.16
HMGCS1-203ENST00000507004 ZC3H11AO75152 810 aaKnown RBP eCLIP16.04■□□□□ 0.16
HMGCS1-203ENST00000507004 RARRES1P49788 294 aa16.04■□□□□ 0.16
HMGCS1-203ENST00000507004 ITIH3Q06033 890 aa16.04■□□□□ 0.16
HMGCS1-203ENST00000507004 GNL2Q13823 731 aaKnown RBP16.04■□□□□ 0.16
HMGCS1-203ENST00000507004 CBX2Q14781 532 aaPredicted RBP16.04■□□□□ 0.16
HMGCS1-203ENST00000507004 HAUS3Q68CZ6 603 aa16.04■□□□□ 0.16
HMGCS1-203ENST00000507004 CES5AQ6NT32 575 aa16.04■□□□□ 0.16
HMGCS1-203ENST00000507004 ZNF579Q8NAF0 562 aaKnown RBP16.04■□□□□ 0.16
HMGCS1-203ENST00000507004 SUSD6Q92537 303 aa16.04■□□□□ 0.16
HMGCS1-203ENST00000507004 FAM122AQ96E09 287 aa16.04■□□□□ 0.16
HMGCS1-203ENST00000507004 IGSF21Q96ID5 467 aa16.04■□□□□ 0.16
HMGCS1-203ENST00000507004 NACC1Q96RE7 527 aa16.04■□□□□ 0.16
HMGCS1-203ENST00000507004 DZANK1Q9NVP4 752 aa16.04■□□□□ 0.16
HMGCS1-203ENST00000507004 NOL7Q9UMY1 257 aaKnown RBP16.04■□□□□ 0.16
HMGCS1-203ENST00000507004 SSX2IPQ9Y2D8 614 aa16.04■□□□□ 0.16
HMGCS1-203ENST00000507004 ZMYM2Q9UBW7 1377 aa16.03■□□□□ 0.16
HMGCS1-203ENST00000507004 C2orf71A6NGG8 1288 aa16.03■□□□□ 0.16
HMGCS1-203ENST00000507004 LOC730098B7Z3J9 87 aa16.03■□□□□ 0.16
HMGCS1-203ENST00000507004 INO80B-WBP1J3KQ70 363 aa16.03■□□□□ 0.16
HMGCS1-203ENST00000507004 NR1I2O75469 434 aa16.03■□□□□ 0.16
HMGCS1-203ENST00000507004 ALDH2P05091 517 aa16.03■□□□□ 0.16
HMGCS1-203ENST00000507004 GALTP07902 379 aa16.03■□□□□ 0.16
HMGCS1-203ENST00000507004 CTSAP10619 480 aa16.03■□□□□ 0.16
HMGCS1-203ENST00000507004 ITGA4P13612 1032 aa16.03■□□□□ 0.16
HMGCS1-203ENST00000507004 HOXA11P31270 313 aaPredicted RBP16.03■□□□□ 0.16
HMGCS1-203ENST00000507004 ARL2P36404 184 aa16.03■□□□□ 0.16
HMGCS1-203ENST00000507004 TECP42680 631 aa16.03■□□□□ 0.16
HMGCS1-203ENST00000507004 RNF135Q8IUD6 432 aa16.03■□□□□ 0.16
HMGCS1-203ENST00000507004 CCDC83Q8IWF9 413 aa16.03■□□□□ 0.16
HMGCS1-203ENST00000507004 VPS52Q8N1B4 723 aa16.03■□□□□ 0.16
HMGCS1-203ENST00000507004 FBXO18Q8NFZ0 1043 aa16.03■□□□□ 0.16
HMGCS1-203ENST00000507004 PRIMPOLQ96LW4 560 aa16.03■□□□□ 0.16
HMGCS1-203ENST00000507004 POLR3CQ9BUI4 534 aaPredicted RBP16.03■□□□□ 0.16
HMGCS1-203ENST00000507004 RAB34Q9BZG1 259 aa16.03■□□□□ 0.16
HMGCS1-203ENST00000507004 NRDE2Q9H7Z3 1164 aa16.03■□□□□ 0.16
HMGCS1-203ENST00000507004 C11orf16Q9NQ32 467 aa16.03■□□□□ 0.16
HMGCS1-203ENST00000507004 XPNPEP1Q9NQW7 623 aa16.03■□□□□ 0.16
HMGCS1-203ENST00000507004 DBR1Q9UK59 544 aaKnown RBP16.03■□□□□ 0.16
HMGCS1-203ENST00000507004 INPP5FQ9Y2H2 1132 aa16.03■□□□□ 0.16
HMGCS1-203ENST00000507004 PCDHGC5Q9Y5F6 944 aa16.03■□□□□ 0.16
HMGCS1-203ENST00000507004 HIDE1A8MVS5 230 aa16.02■□□□□ 0.16
HMGCS1-203ENST00000507004 INPPL1O15357 1258 aa16.02■□□□□ 0.16
HMGCS1-203ENST00000507004 CXCL14O95715 111 aa16.02■□□□□ 0.16
HMGCS1-203ENST00000507004 OR52Z1P0C646 297 aa16.02■□□□□ 0.16
HMGCS1-203ENST00000507004 MCM7P33993 719 aa16.02■□□□□ 0.16
HMGCS1-203ENST00000507004 PLA2G5P39877 138 aa16.02■□□□□ 0.16
HMGCS1-203ENST00000507004 PBX3P40426 434 aa16.02■□□□□ 0.16
HMGCS1-203ENST00000507004 ELMSAN1Q6PJG2 1045 aa16.02■□□□□ 0.16
HMGCS1-203ENST00000507004 AGMOQ6ZNB7 445 aa16.02■□□□□ 0.16
HMGCS1-203ENST00000507004 LPPQ93052 612 aa16.02■□□□□ 0.16
HMGCS1-203ENST00000507004 TRIM6Q9C030 488 aaPredicted RBP16.02■□□□□ 0.16
HMGCS1-203ENST00000507004 ZBP1Q9H171 429 aa16.02■□□□□ 0.16
HMGCS1-203ENST00000507004 CSRNP2Q9H175 543 aa16.02■□□□□ 0.16
HMGCS1-203ENST00000507004 C2orf40Q9H1Z8 148 aa16.02■□□□□ 0.16
HMGCS1-203ENST00000507004 MINDY3Q9H8M7 445 aa16.02■□□□□ 0.16
HMGCS1-203ENST00000507004 DPP7Q9UHL4 492 aa16.02■□□□□ 0.16
HMGCS1-203ENST00000507004 FAN1Q9Y2M0 1017 aa16.02■□□□□ 0.16
HMGCS1-203ENST00000507004 GIT1Q9Y2X7 761 aa16.02■□□□□ 0.16
HMGCS1-203ENST00000507004 HCFC2Q9Y5Z7 792 aa16.02■□□□□ 0.16
HMGCS1-203ENST00000507004 TSPAN1O60635 241 aa16.01■□□□□ 0.15
HMGCS1-203ENST00000507004 RPA1P27694 616 aa16.01■□□□□ 0.15
HMGCS1-203ENST00000507004 MTHFRP42898 656 aa16.01■□□□□ 0.15
HMGCS1-203ENST00000507004 UBXN11Q5T124 520 aa16.01■□□□□ 0.15
HMGCS1-203ENST00000507004 ZBTB8OSQ8IWT0 167 aa16.01■□□□□ 0.15
HMGCS1-203ENST00000507004 VN1R2Q8NFZ6 395 aa16.01■□□□□ 0.15
HMGCS1-203ENST00000507004 EDAQ92838 391 aa16.01■□□□□ 0.15
HMGCS1-203ENST00000507004 MFSD14AQ96MC6 490 aa16.01■□□□□ 0.15
HMGCS1-203ENST00000507004 RIPOR3Q96MK2 946 aa16.01■□□□□ 0.15
HMGCS1-203ENST00000507004 EMILIN2Q9BXX0 1053 aa16.01■□□□□ 0.15
HMGCS1-203ENST00000507004 S1PR5Q9H228 398 aa16.01■□□□□ 0.15
HMGCS1-203ENST00000507004 BMP2KQ9NSY1 1161 aaPredicted RBP16.01■□□□□ 0.15
HMGCS1-203ENST00000507004 PRMT7Q9NVM4 692 aaPredicted RBP16.01■□□□□ 0.15
HMGCS1-203ENST00000507004 NR2E1Q9Y466 385 aa16.01■□□□□ 0.15
HMGCS1-203ENST00000507004 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16■□□□□ 0.15
HMGCS1-203ENST00000507004 NT5C1B-RDH14C9J2C7 533 aa16■□□□□ 0.15
HMGCS1-203ENST00000507004 ZBTB39O15060 712 aa16■□□□□ 0.15
HMGCS1-203ENST00000507004 CLASP2O75122 1294 aaKnown RBP16■□□□□ 0.15
HMGCS1-203ENST00000507004 SEC24BO95487 1268 aa16■□□□□ 0.15
HMGCS1-203ENST00000507004 ATP2B1P20020 1258 aa16■□□□□ 0.15
HMGCS1-203ENST00000507004 CA8P35219 290 aa16■□□□□ 0.15
HMGCS1-203ENST00000507004 MBTD1Q05BQ5 628 aa16■□□□□ 0.15
HMGCS1-203ENST00000507004 ST3GAL1Q11201 340 aa16■□□□□ 0.15
HMGCS1-203ENST00000507004 CAPSQ13938 189 aa16■□□□□ 0.15
HMGCS1-203ENST00000507004 PPP2R5AQ15172 486 aa16■□□□□ 0.15
HMGCS1-203ENST00000507004 TTC38Q5R3I4 469 aa16■□□□□ 0.15
HMGCS1-203ENST00000507004 SYCE2Q6PIF2 218 aa16■□□□□ 0.15
HMGCS1-203ENST00000507004 PPP4R3CPQ6ZMV5 832 aa16■□□□□ 0.15
HMGCS1-203ENST00000507004 BMP8AQ7Z5Y6 402 aa16■□□□□ 0.15
HMGCS1-203ENST00000507004 CATSPER3Q86XQ3 398 aa16■□□□□ 0.15
HMGCS1-203ENST00000507004 NOSTRINQ8IVI9 506 aa16■□□□□ 0.15
HMGCS1-203ENST00000507004 TMEM60Q9H2L4 133 aa16■□□□□ 0.15
HMGCS1-203ENST00000507004 ADAM7Q9H2U9 754 aa16■□□□□ 0.15
HMGCS1-203ENST00000507004 IPPQ9Y573 584 aa16■□□□□ 0.15
HMGCS1-203ENST00000507004 ARID2Q68CP9 1835 aa16■□□□□ 0.15
HMGCS1-203ENST00000507004 FAM86C2PA6NEL3 165 aa15.99■□□□□ 0.15
HMGCS1-203ENST00000507004 POTEMA6NI47 508 aa15.99■□□□□ 0.15
HMGCS1-203ENST00000507004 LAD1O00515 517 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms