RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 ARHGEF10LQ9HCE6 1279 aa10.32□□□□□ -0.76
PHF3-208ENST00000506783 FGFR1OP2Q9NVK5 253 aa10.32□□□□□ -0.76
PHF3-208ENST00000506783 MTRF1LQ9UGC7 380 aaKnown RBP10.32□□□□□ -0.76
PHF3-208ENST00000506783 SEPT9Q9UHD8 586 aaPredicted RBP10.32□□□□□ -0.76
PHF3-208ENST00000506783 COL4A1P02462 1669 aa10.32□□□□□ -0.76
PHF3-208ENST00000506783 SOX5P35711 763 aa10.32□□□□□ -0.76
PHF3-208ENST00000506783 PPP1R2P41236 205 aa10.32□□□□□ -0.76
PHF3-208ENST00000506783 ZNF844Q08AG5 666 aa10.32□□□□□ -0.76
PHF3-208ENST00000506783 PTGISQ16647 500 aa10.32□□□□□ -0.76
PHF3-208ENST00000506783 SPRED3Q2MJR0 410 aa10.32□□□□□ -0.76
PHF3-208ENST00000506783 SMTNL2Q2TAL5 461 aa10.32□□□□□ -0.76
PHF3-208ENST00000506783 ALS2CLQ60I27 953 aa10.32□□□□□ -0.76
PHF3-208ENST00000506783 UBL4BQ8N7F7 174 aa10.32□□□□□ -0.76
PHF3-208ENST00000506783 LNX1Q8TBB1 728 aaPredicted RBP10.32□□□□□ -0.76
PHF3-208ENST00000506783 TATDN2Q93075 761 aa10.32□□□□□ -0.76
PHF3-208ENST00000506783 TMEM143Q96AN5 459 aa10.32□□□□□ -0.76
PHF3-208ENST00000506783 C12orf65Q9H3J6 166 aaKnown RBP10.32□□□□□ -0.76
PHF3-208ENST00000506783 TRIM33Q9UPN9 1127 aa10.32□□□□□ -0.76
PHF3-208ENST00000506783 E2F8A0AVK6 867 aa10.32□□□□□ -0.76
PHF3-208ENST00000506783 MEFVO15553 781 aaPredicted RBP10.32□□□□□ -0.76
PHF3-208ENST00000506783 SLITRK3O94933 977 aa10.32□□□□□ -0.76
PHF3-208ENST00000506783 FGRP09769 529 aa10.32□□□□□ -0.76
PHF3-208ENST00000506783 MAPK4P31152 587 aa10.32□□□□□ -0.76
PHF3-208ENST00000506783 PSMD2Q13200 908 aa10.32□□□□□ -0.76
PHF3-208ENST00000506783 RRP1BQ14684 758 aaKnown RBP10.32□□□□□ -0.76
PHF3-208ENST00000506783 LDHDQ86WU2 507 aa10.32□□□□□ -0.76
PHF3-208ENST00000506783 ANKMY2Q8IV38 441 aa10.32□□□□□ -0.76
PHF3-208ENST00000506783 WDR18Q9BV38 432 aa10.32□□□□□ -0.76
PHF3-208ENST00000506783 UNC45AQ9H3U1 944 aa10.32□□□□□ -0.76
PHF3-208ENST00000506783 MAGEF1Q9HAY2 307 aa10.32□□□□□ -0.76
PHF3-208ENST00000506783 TYW1Q9NV66 732 aaKnown RBP10.32□□□□□ -0.76
PHF3-208ENST00000506783 DCTN4Q9UJW0 460 aa10.32□□□□□ -0.76
PHF3-208ENST00000506783 TCP11X1B4DZS4 312 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 RASGRF2O14827 1237 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 SRGAP2CP0DJJ0 459 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 PYGMP11217 842 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 STX2P32856 288 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 USP11P51784 963 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 SLC12A3P55017 1021 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 PPP2R2AP63151 447 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 PPP3CAQ08209 521 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 CIAPIN1Q6FI81 312 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 EP400NLQ6ZTU2 488 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 PODNQ7Z5L7 613 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 UBXN6Q9BZV1 441 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 MTFR1LQ9H019 292 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 PCSK1NQ9UHG2 260 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 RASAL2Q9UJF2 1139 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 SYNJ2BP-COX16A0A087WUM0 186 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 SSU72P8A0A1W2PR75 194 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 DENND3A2RUS2 1198 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 TULP2O00295 520 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 PMS2P54278 862 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 KIAA1755Q5JYT7 1200 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 ARHGEF16Q5VV41 709 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 DCUN1D2Q6PH85 259 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 LRRC34Q8IZ02 419 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 RNF10Q8N5U6 811 aaKnown RBP10.31□□□□□ -0.76
PHF3-208ENST00000506783 PRCCQ92733 491 aaPredicted RBP10.31□□□□□ -0.76
PHF3-208ENST00000506783 ZBTB10Q96DT7 871 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 PAGR1Q9BTK6 254 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 TMEM117Q9H0C3 514 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 EPN3Q9H201 632 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 AGPAT3Q9NRZ7 376 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 COX16Q9P0S2 106 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 BANF1O75531 89 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 ZSCAN5DPP0CG00 497 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 FERP16591 822 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 RPA1P27694 616 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 CLNS1AP54105 237 aaKnown RBP10.31□□□□□ -0.76
PHF3-208ENST00000506783 SPP2Q13103 211 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 EML3Q32P44 896 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 CEP55Q53EZ4 464 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 SWSAP1Q6NVH7 229 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 TMEM270Q6UE05 265 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 STXBP4Q6ZWJ1 553 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 HAUS6Q7Z4H7 955 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 VSIG1Q86XK7 387 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 JAMLQ86YT9 394 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 CCDC13Q8IYE1 715 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 TMEM130Q8N3G9 435 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 NEK9Q8TD19 979 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 SEC16BQ96JE7 1060 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 PSMD1Q99460 953 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 TEKT3Q9BXF9 490 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 KCTD10Q9H3F6 313 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 ZWILCHQ9H900 591 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 RNF181Q9P0P0 153 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 TSKSQ9UJT2 592 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 MTUS1Q9ULD2 1270 aa10.31□□□□□ -0.76
PHF3-208ENST00000506783 ANKRD63C9JTQ0 380 aa10.3□□□□□ -0.76
PHF3-208ENST00000506783 O00370 1275 aa10.3□□□□□ -0.76
PHF3-208ENST00000506783 TGFB1I1O43294 461 aa10.3□□□□□ -0.76
PHF3-208ENST00000506783 CYP3A4P08684 503 aa10.3□□□□□ -0.76
PHF3-208ENST00000506783 VAMP7P51809 220 aa10.3□□□□□ -0.76
PHF3-208ENST00000506783 RNASELQ05823 741 aaKnown RBP10.3□□□□□ -0.76
PHF3-208ENST00000506783 MYO1EQ12965 1108 aa10.3□□□□□ -0.76
PHF3-208ENST00000506783 KCNT1Q5JUK3 1230 aa10.3□□□□□ -0.76
PHF3-208ENST00000506783 ISLR2Q6UXK2 745 aa10.3□□□□□ -0.76
PHF3-208ENST00000506783 MMS22LQ6ZRQ5 1243 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms