RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 PPP2R5AQ15172 486 aa13.27□□□□□ -0.29
LIN54-206ENST00000506560 SCARA3Q6AZY7 606 aa13.27□□□□□ -0.29
LIN54-206ENST00000506560 C12orf56Q8IXR9 622 aa13.27□□□□□ -0.29
LIN54-206ENST00000506560 COG1Q8WTW3 980 aa13.27□□□□□ -0.29
LIN54-206ENST00000506560 TRAPPC12Q8WVT3 735 aa13.27□□□□□ -0.29
LIN54-206ENST00000506560 MS4A4AQ96JQ5 239 aa13.27□□□□□ -0.29
LIN54-206ENST00000506560 TIPINQ9BVW5 301 aa13.27□□□□□ -0.29
LIN54-206ENST00000506560 ARHGAP28Q9P2N2 729 aa13.27□□□□□ -0.29
LIN54-206ENST00000506560 PACSIN2Q9UNF0 486 aaPredicted RBP13.27□□□□□ -0.29
LIN54-206ENST00000506560 BRCA2P51587 3418 aa13.27□□□□□ -0.29
LIN54-206ENST00000506560 BTBD19C9JJ37 291 aa13.26□□□□□ -0.29
LIN54-206ENST00000506560 DDX3XO00571 662 aaKnown RBP eCLIP13.26□□□□□ -0.291e-9■■■□□ 18.6
LIN54-206ENST00000506560 SEC31AO94979 1220 aaKnown RBP13.26□□□□□ -0.29
LIN54-206ENST00000506560 GJB1P08034 283 aa13.26□□□□□ -0.29
LIN54-206ENST00000506560 H2AFXP16104 143 aaPredicted RBP13.26□□□□□ -0.29
LIN54-206ENST00000506560 STAT5BP51692 787 aa13.26□□□□□ -0.29
LIN54-206ENST00000506560 SNAPC2Q13487 334 aa13.26□□□□□ -0.29
LIN54-206ENST00000506560 ALCAMQ13740 583 aa13.26□□□□□ -0.29
LIN54-206ENST00000506560 KIAA0753Q2KHM9 967 aa13.26□□□□□ -0.29
LIN54-206ENST00000506560 ZBTB41Q5SVQ8 909 aa13.26□□□□□ -0.29
LIN54-206ENST00000506560 NFRKBQ6P4R8 1299 aa13.26□□□□□ -0.29
LIN54-206ENST00000506560 INTS8Q75QN2 995 aaKnown RBP13.26□□□□□ -0.29
LIN54-206ENST00000506560 FASTKD5Q7L8L6 764 aaKnown RBP13.26□□□□□ -0.29
LIN54-206ENST00000506560 LNX1Q8TBB1 728 aaPredicted RBP13.26□□□□□ -0.29
LIN54-206ENST00000506560 POMGNT1Q8WZA1 660 aa13.26□□□□□ -0.29
LIN54-206ENST00000506560 NUCKS1Q9H1E3 243 aaKnown RBP13.26□□□□□ -0.29
LIN54-206ENST00000506560 DHX33Q9H6R0 707 aaKnown RBP13.26□□□□□ -0.29
LIN54-206ENST00000506560 CEP350Q5VT06 3117 aa13.26□□□□□ -0.29
LIN54-206ENST00000506560 SCN4AP35499 1836 aa13.26□□□□□ -0.29
LIN54-206ENST00000506560 LRRIQ4A6NIV6 560 aa13.26□□□□□ -0.29
LIN54-206ENST00000506560 TMCO5BA8MYB1 307 aa13.26□□□□□ -0.29
LIN54-206ENST00000506560 FOXN3O00409 490 aaPredicted RBP13.26□□□□□ -0.29
LIN54-206ENST00000506560 PJA2O43164 708 aa13.26□□□□□ -0.29
LIN54-206ENST00000506560 OSBPP22059 807 aa13.26□□□□□ -0.29
LIN54-206ENST00000506560 NAP1L1P55209 391 aaKnown RBP13.26□□□□□ -0.29
LIN54-206ENST00000506560 SEZ6Q53EL9 994 aa13.26□□□□□ -0.29
LIN54-206ENST00000506560 PAPD7Q5XG87 772 aaKnown RBP13.26□□□□□ -0.29
LIN54-206ENST00000506560 MCPH1Q8NEM0 835 aa13.26□□□□□ -0.29
LIN54-206ENST00000506560 SPIRE2Q8WWL2 714 aa13.26□□□□□ -0.29
LIN54-206ENST00000506560 BRI3BPQ8WY22 251 aa13.26□□□□□ -0.29
LIN54-206ENST00000506560 APEX2Q9UBZ4 518 aa13.26□□□□□ -0.29
LIN54-206ENST00000506560 LRRIQ3A6PVS8 624 aaPredicted RBP13.26□□□□□ -0.29
LIN54-206ENST00000506560 PDHXO00330 501 aa13.26□□□□□ -0.29
LIN54-206ENST00000506560 SLC25A27O95847 323 aa13.26□□□□□ -0.29
LIN54-206ENST00000506560 RHOXF2BP0C7M4 288 aa13.26□□□□□ -0.29
LIN54-206ENST00000506560 EPC2Q52LR7 807 aa13.26□□□□□ -0.29
LIN54-206ENST00000506560 METTL7BQ6UX53 244 aa13.26□□□□□ -0.29
LIN54-206ENST00000506560 LRRC71Q8N4P6 559 aa13.26□□□□□ -0.29
LIN54-206ENST00000506560 BICD1Q96G01 975 aa13.26□□□□□ -0.29
LIN54-206ENST00000506560 HINFPQ9BQA5 517 aa13.26□□□□□ -0.29
LIN54-206ENST00000506560 RHOXF2Q9BQY4 288 aa13.26□□□□□ -0.29
LIN54-206ENST00000506560 FAM213AQ9BRX8 229 aa13.26□□□□□ -0.29
LIN54-206ENST00000506560 SAR1BQ9Y6B6 198 aa13.26□□□□□ -0.29
LIN54-206ENST00000506560 DOCK3Q8IZD9 2030 aa13.25□□□□□ -0.29
LIN54-206ENST00000506560 IQCA1LA6NCM1 817 aa13.25□□□□□ -0.29
LIN54-206ENST00000506560 FTCDO95954 541 aa13.25□□□□□ -0.29
LIN54-206ENST00000506560 CALCAP01258 141 aa13.25□□□□□ -0.29
LIN54-206ENST00000506560 DLATP10515 647 aaKnown RBP13.25□□□□□ -0.29
LIN54-206ENST00000506560 SOX5P35711 763 aa13.25□□□□□ -0.29
LIN54-206ENST00000506560 MRPS25P82663 173 aaKnown RBP13.25□□□□□ -0.29
LIN54-206ENST00000506560 GLYCTKQ8IVS8 523 aa13.25□□□□□ -0.29
LIN54-206ENST00000506560 EHBP1Q8NDI1 1231 aa13.25□□□□□ -0.29
LIN54-206ENST00000506560 PARD3BQ8TEW8 1205 aa13.25□□□□□ -0.29
LIN54-206ENST00000506560 PNKPQ96T60 521 aa13.25□□□□□ -0.29
LIN54-206ENST00000506560 GPR20Q99678 358 aa13.25□□□□□ -0.29
LIN54-206ENST00000506560 PARD6BQ9BYG5 372 aa13.25□□□□□ -0.29
LIN54-206ENST00000506560 ANKZF1Q9H8Y5 726 aa13.25□□□□□ -0.29
LIN54-206ENST00000506560 UBE2TQ9NPD8 197 aaPredicted RBP13.25□□□□□ -0.29
LIN54-206ENST00000506560 TAS2R14Q9NYV8 317 aa13.25□□□□□ -0.29
LIN54-206ENST00000506560 CGNQ9P2M7 1197 aaKnown RBP13.25□□□□□ -0.29
LIN54-206ENST00000506560 NAGPAQ9UK23 515 aa13.25□□□□□ -0.29
LIN54-206ENST00000506560 FBXL5Q9UKA1 691 aa13.25□□□□□ -0.29
LIN54-206ENST00000506560 EVPLQ92817 2033 aa13.25□□□□□ -0.29
LIN54-206ENST00000506560 CCL15-CCL14A0A0B4J2E2 113 aa13.25□□□□□ -0.29
LIN54-206ENST00000506560 ACOT2P49753 483 aa13.25□□□□□ -0.29
LIN54-206ENST00000506560 MXI1P50539 228 aa13.25□□□□□ -0.29
LIN54-206ENST00000506560 MKRN4PQ13434 485 aaPredicted RBP13.25□□□□□ -0.29
LIN54-206ENST00000506560 MYBPC2Q14324 1141 aa13.25□□□□□ -0.29
LIN54-206ENST00000506560 TARBP2Q15633 366 aaKnown RBP13.25□□□□□ -0.29
LIN54-206ENST00000506560 CCL15Q16663 113 aa13.25□□□□□ -0.29
LIN54-206ENST00000506560 TAS1R2Q8TE23 839 aa13.25□□□□□ -0.29
LIN54-206ENST00000506560 SLC20A1Q8WUM9 679 aa13.25□□□□□ -0.29
LIN54-206ENST00000506560 SEPT1Q8WYJ6 367 aa13.25□□□□□ -0.29
LIN54-206ENST00000506560 GLG1Q92896 1179 aa13.25□□□□□ -0.29
LIN54-206ENST00000506560 PI4K2AQ9BTU6 479 aa13.25□□□□□ -0.29
LIN54-206ENST00000506560 STK33Q9BYT3 514 aa13.25□□□□□ -0.29
LIN54-206ENST00000506560 TSGA10Q9BZW7 698 aa13.25□□□□□ -0.29
LIN54-206ENST00000506560 SUGCTQ9HAC7 445 aa13.25□□□□□ -0.29
LIN54-206ENST00000506560 ZBTB42B2RXF5 422 aa13.24□□□□□ -0.29
LIN54-206ENST00000506560 DKC1O60832 514 aaKnown RBP eCLIP13.24□□□□□ -0.29
LIN54-206ENST00000506560 PALMO75781 387 aa13.24□□□□□ -0.29
LIN54-206ENST00000506560 ARL2P36404 184 aa13.24□□□□□ -0.29
LIN54-206ENST00000506560 PRKCIP41743 596 aa13.24□□□□□ -0.29
LIN54-206ENST00000506560 NEDD9Q14511 834 aa13.24□□□□□ -0.29
LIN54-206ENST00000506560 KCTD19Q17RG1 926 aaPredicted RBP13.24□□□□□ -0.29
LIN54-206ENST00000506560 ALKBH5Q6P6C2 394 aaKnown RBP13.24□□□□□ -0.29
LIN54-206ENST00000506560 U2AF1L4Q8WU68 220 aaKnown RBP13.24□□□□□ -0.29
LIN54-206ENST00000506560 GOLGA1Q92805 767 aa13.24□□□□□ -0.29
LIN54-206ENST00000506560 IFT74Q96LB3 600 aa13.24□□□□□ -0.29
LIN54-206ENST00000506560 TARS2Q9BW92 718 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms