RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 KIFAP3Q92845 792 aa8.05□□□□□ -1.12
GYPB-206ENST00000506516 IFT74Q96LB3 600 aa8.05□□□□□ -1.12
GYPB-206ENST00000506516 YME1L1Q96TA2 773 aa8.05□□□□□ -1.12
GYPB-206ENST00000506516 PLIN2Q99541 437 aa8.05□□□□□ -1.12
GYPB-206ENST00000506516 ADAM2Q99965 735 aa8.05□□□□□ -1.12
GYPB-206ENST00000506516 MMTAG2Q9BU76 263 aaKnown RBP8.05□□□□□ -1.12
GYPB-206ENST00000506516 TIPINQ9BVW5 301 aa8.05□□□□□ -1.12
GYPB-206ENST00000506516 CCSER1Q9C0I3 900 aa8.05□□□□□ -1.12
GYPB-206ENST00000506516 CSRNP2Q9H175 543 aa8.05□□□□□ -1.12
GYPB-206ENST00000506516 NKX2-4Q9H2Z4 354 aa8.05□□□□□ -1.12
GYPB-206ENST00000506516 TMX1Q9H3N1 280 aa8.05□□□□□ -1.12
GYPB-206ENST00000506516 SEMA6BQ9H3T3 888 aa8.05□□□□□ -1.12
GYPB-206ENST00000506516 ZNF576Q9H609 170 aa8.05□□□□□ -1.12
GYPB-206ENST00000506516 IFT122Q9HBG6 1241 aa8.05□□□□□ -1.12
GYPB-206ENST00000506516 XPNPEP1Q9NQW7 623 aa8.05□□□□□ -1.12
GYPB-206ENST00000506516 PLA2G2EQ9NZK7 142 aa8.05□□□□□ -1.12
GYPB-206ENST00000506516 KCND2Q9NZV8 630 aa8.05□□□□□ -1.12
GYPB-206ENST00000506516 FBXO2Q9UK22 296 aaPredicted RBP8.05□□□□□ -1.12
GYPB-206ENST00000506516 MYH9P35579 1960 aaKnown RBP8.04□□□□□ -1.12
GYPB-206ENST00000506516 LAMA3Q16787 3333 aa8.04□□□□□ -1.12
GYPB-206ENST00000506516 ERLIN2O94905 339 aa8.04□□□□□ -1.12
GYPB-206ENST00000506516 BRD1O95696 1058 aa8.04□□□□□ -1.12
GYPB-206ENST00000506516 SSBP05455 408 aaKnown RBP eCLIP8.04□□□□□ -1.12
GYPB-206ENST00000506516 CA3P07451 260 aa8.04□□□□□ -1.12
GYPB-206ENST00000506516 PLA2G4BP0C869 781 aa8.04□□□□□ -1.12
GYPB-206ENST00000506516 FGFR4P22455 802 aa8.04□□□□□ -1.12
GYPB-206ENST00000506516 GLRA2P23416 452 aa8.04□□□□□ -1.12
GYPB-206ENST00000506516 DDIT3P35638 169 aa8.04□□□□□ -1.12
GYPB-206ENST00000506516 SARSP49591 514 aaKnown RBP8.04□□□□□ -1.12
GYPB-206ENST00000506516 PTPN5P54829 565 aa8.04□□□□□ -1.12
GYPB-206ENST00000506516 PTENP60484 403 aa8.04□□□□□ -1.12
GYPB-206ENST00000506516 NUCB2P80303 420 aa8.04□□□□□ -1.12
GYPB-206ENST00000506516 FAM189BP81408 668 aa8.04□□□□□ -1.12
GYPB-206ENST00000506516 GRIN1Q05586 938 aa8.04□□□□□ -1.12
GYPB-206ENST00000506516 GRB10Q13322 594 aa8.04□□□□□ -1.12
GYPB-206ENST00000506516 PKP1Q13835 747 aa8.04□□□□□ -1.12
GYPB-206ENST00000506516 CCDC73Q6ZRK6 1079 aa8.04□□□□□ -1.12
GYPB-206ENST00000506516 TMCO2Q7Z6W1 182 aaPredicted RBP8.04□□□□□ -1.12
GYPB-206ENST00000506516 NPAS4Q8IUM7 802 aa8.04□□□□□ -1.12
GYPB-206ENST00000506516 ZBTB8OSQ8IWT0 167 aa8.04□□□□□ -1.12
GYPB-206ENST00000506516 KCNG4Q8TDN1 519 aa8.04□□□□□ -1.12
GYPB-206ENST00000506516 DRC1Q96MC2 740 aa8.04□□□□□ -1.12
GYPB-206ENST00000506516 FAM161BQ96MY7 647 aa8.04□□□□□ -1.12
GYPB-206ENST00000506516 CLIC6Q96NY7 704 aa8.04□□□□□ -1.12
GYPB-206ENST00000506516 PNMA5Q96PV4 448 aa8.04□□□□□ -1.12
GYPB-206ENST00000506516 NFKBIZQ9BYH8 718 aa8.04□□□□□ -1.12
GYPB-206ENST00000506516 POLR3FQ9H1D9 316 aaPredicted RBP8.04□□□□□ -1.12
GYPB-206ENST00000506516 C2orf40Q9H1Z8 148 aa8.04□□□□□ -1.12
GYPB-206ENST00000506516 ELAC1Q9H777 363 aaKnown RBP8.04□□□□□ -1.12
GYPB-206ENST00000506516 C17orf75Q9HAS0 396 aa8.04□□□□□ -1.12
GYPB-206ENST00000506516 SLC27A5Q9Y2P5 690 aa8.04□□□□□ -1.12
GYPB-206ENST00000506516 YBX2Q9Y2T7 364 aaKnown RBP8.04□□□□□ -1.12
GYPB-206ENST00000506516 PCDHB3Q9Y5E6 796 aa8.04□□□□□ -1.12
GYPB-206ENST00000506516 TRIP12Q14669 1992 aaPredicted RBP8.04□□□□□ -1.12
GYPB-206ENST00000506516 CEP290O15078 2479 aa8.03□□□□□ -1.12
GYPB-206ENST00000506516 TANC1Q9C0D5 1861 aa8.03□□□□□ -1.12
GYPB-206ENST00000506516 A0A0U1RQF3 1178 aa8.03□□□□□ -1.12
GYPB-206ENST00000506516 LRRIQ4A6NIV6 560 aa8.03□□□□□ -1.12
GYPB-206ENST00000506516 C9IYK1 514 aa8.03□□□□□ -1.12
GYPB-206ENST00000506516 INO80B-WBP1J3KQ70 363 aa8.03□□□□□ -1.12
GYPB-206ENST00000506516 MGEA5O60502 916 aa8.03□□□□□ -1.12
GYPB-206ENST00000506516 CUTAO60888 179 aa8.03□□□□□ -1.12
GYPB-206ENST00000506516 CSDE1O75534 798 aaKnown RBP8.03□□□□□ -1.12
GYPB-206ENST00000506516 AP1G2O75843 785 aa8.03□□□□□ -1.12
GYPB-206ENST00000506516 EOMESO95936 686 aa8.03□□□□□ -1.12
GYPB-206ENST00000506516 MYOGP15173 224 aa8.03□□□□□ -1.12
GYPB-206ENST00000506516 IBSPP21815 317 aaPredicted RBP8.03□□□□□ -1.12
GYPB-206ENST00000506516 AXLP30530 894 aa8.03□□□□□ -1.12
GYPB-206ENST00000506516 NAMPTP43490 491 aa8.03□□□□□ -1.12
GYPB-206ENST00000506516 EFNA5P52803 228 aa8.03□□□□□ -1.12
GYPB-206ENST00000506516 HTRA4P83105 476 aaPredicted RBP8.03□□□□□ -1.12
GYPB-206ENST00000506516 DNM1Q05193 864 aaKnown RBP8.03□□□□□ -1.12
GYPB-206ENST00000506516 CAPSQ13938 189 aa8.03□□□□□ -1.12
GYPB-206ENST00000506516 BTG3Q14201 252 aaPredicted RBP8.03□□□□□ -1.12
GYPB-206ENST00000506516 DSC3Q14574 896 aa8.03□□□□□ -1.12
GYPB-206ENST00000506516 KARSQ15046 597 aaKnown RBP8.03□□□□□ -1.12
GYPB-206ENST00000506516 TMEM119Q4V9L6 283 aa8.03□□□□□ -1.12
GYPB-206ENST00000506516 SPECC1Q5M775 1068 aa8.03□□□□□ -1.12
GYPB-206ENST00000506516 RRAGBQ5VZM2 374 aa8.03□□□□□ -1.12
GYPB-206ENST00000506516 TWF2Q6IBS0 349 aaKnown RBP8.03□□□□□ -1.12
GYPB-206ENST00000506516 RINT1Q6NUQ1 792 aa8.03□□□□□ -1.12
GYPB-206ENST00000506516 C1orf186Q6ZWK4 172 aa8.03□□□□□ -1.12
GYPB-206ENST00000506516 Q7L0L9 218 aa8.03□□□□□ -1.12
GYPB-206ENST00000506516 FIBCD1Q8N539 461 aa8.03□□□□□ -1.12
GYPB-206ENST00000506516 DEPTORQ8TB45 409 aa8.03□□□□□ -1.12
GYPB-206ENST00000506516 ASAP3Q8TDY4 903 aa8.03□□□□□ -1.12
GYPB-206ENST00000506516 SYMPKQ92797 1274 aaKnown RBP8.03□□□□□ -1.12
GYPB-206ENST00000506516 PGBD4Q96DM1 585 aa8.03□□□□□ -1.12
GYPB-206ENST00000506516 EPSTI1Q96J88 318 aa8.03□□□□□ -1.12
GYPB-206ENST00000506516 ZMYND15Q9H091 742 aa8.03□□□□□ -1.12
GYPB-206ENST00000506516 GPRC5CQ9NQ84 441 aa8.03□□□□□ -1.12
GYPB-206ENST00000506516 TMEM161AQ9NX61 479 aa8.03□□□□□ -1.12
GYPB-206ENST00000506516 RCOR1Q9UKL0 485 aa8.03□□□□□ -1.12
GYPB-206ENST00000506516 PIN4Q9Y237 131 aaKnown RBP8.03□□□□□ -1.12
GYPB-206ENST00000506516 SCN5AQ14524 2016 aa8.03□□□□□ -1.12
GYPB-206ENST00000506516 PHLPP2Q6ZVD8 1323 aa8.03□□□□□ -1.12
GYPB-206ENST00000506516 CCDC169A6NNP5 214 aa8.02□□□□□ -1.13
GYPB-206ENST00000506516 K7ERI5 159 aa8.02□□□□□ -1.13
GYPB-206ENST00000506516 HIP1RO75146 1068 aa8.02□□□□□ -1.13
GYPB-206ENST00000506516 DGKIO75912 1065 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms