RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 IMPACTQ9P2X3 320 aa6.56□□□□□ -1.36
SCLT1-207ENST00000506233 NAP1L2Q9ULW6 460 aaPredicted RBP6.56□□□□□ -1.36
SCLT1-207ENST00000506233 FAM221AA4D161 298 aa6.55□□□□□ -1.36
SCLT1-207ENST00000506233 ACPPP15309 386 aa6.55□□□□□ -1.36
SCLT1-207ENST00000506233 HNRNPH3P31942 346 aaKnown RBP6.55□□□□□ -1.36
SCLT1-207ENST00000506233 SP2Q02086 613 aa6.55□□□□□ -1.36
SCLT1-207ENST00000506233 GIT2Q14161 759 aa6.55□□□□□ -1.36
SCLT1-207ENST00000506233 AGBL3Q8NEM8 1001 aa6.55□□□□□ -1.36
SCLT1-207ENST00000506233 USP33Q8TEY7 942 aa6.55□□□□□ -1.36
SCLT1-207ENST00000506233 RAD54LQ92698 747 aa6.55□□□□□ -1.36
SCLT1-207ENST00000506233 SLC5A5Q92911 643 aa6.55□□□□□ -1.36
SCLT1-207ENST00000506233 ZNF622Q969S3 477 aaKnown RBP eCLIP6.55□□□□□ -1.36
SCLT1-207ENST00000506233 CHP1Q99653 195 aa6.55□□□□□ -1.36
SCLT1-207ENST00000506233 TRHDEQ9UKU6 1024 aa6.55□□□□□ -1.36
SCLT1-207ENST00000506233 SPEGQ15772 3267 aa6.55□□□□□ -1.36
SCLT1-207ENST00000506233 RSPH10B2B2RC85 870 aa6.55□□□□□ -1.36
SCLT1-207ENST00000506233 CCNT1O60563 726 aaKnown RBP6.55□□□□□ -1.36
SCLT1-207ENST00000506233 RSPH10BP0C881 870 aa6.55□□□□□ -1.36
SCLT1-207ENST00000506233 ATP4AP20648 1035 aa6.55□□□□□ -1.36
SCLT1-207ENST00000506233 AFMP43652 599 aa6.55□□□□□ -1.36
SCLT1-207ENST00000506233 ID4P47928 161 aa6.55□□□□□ -1.36
SCLT1-207ENST00000506233 VEGFBP49765 207 aa6.55□□□□□ -1.36
SCLT1-207ENST00000506233 ZNF131P52739 623 aa6.55□□□□□ -1.36
SCLT1-207ENST00000506233 ADKP55263 362 aaKnown RBP6.55□□□□□ -1.36
SCLT1-207ENST00000506233 UGCGQ16739 394 aa6.55□□□□□ -1.36
SCLT1-207ENST00000506233 MOXD1Q6UVY6 613 aa6.55□□□□□ -1.36
SCLT1-207ENST00000506233 TMEM179Q6ZVK1 233 aa6.55□□□□□ -1.36
SCLT1-207ENST00000506233 NEK8Q86SG6 692 aa6.55□□□□□ -1.36
SCLT1-207ENST00000506233 CNNM3Q8NE01 707 aa6.55□□□□□ -1.36
SCLT1-207ENST00000506233 PPM1EQ8WY54 764 aa6.55□□□□□ -1.36
SCLT1-207ENST00000506233 PLIN2Q99541 437 aa6.55□□□□□ -1.36
SCLT1-207ENST00000506233 HAPLN2Q9GZV7 340 aa6.55□□□□□ -1.36
SCLT1-207ENST00000506233 MKNK2Q9HBH9 465 aa6.55□□□□□ -1.36
SCLT1-207ENST00000506233 AGPAT5Q9NUQ2 364 aa6.55□□□□□ -1.36
SCLT1-207ENST00000506233 OBP2AQ9NY56 170 aa6.55□□□□□ -1.36
SCLT1-207ENST00000506233 FNIP2Q9P278 1114 aa6.55□□□□□ -1.36
SCLT1-207ENST00000506233 TRIM10Q9UDY6 481 aa6.55□□□□□ -1.36
SCLT1-207ENST00000506233 FCF1Q9Y324 198 aaKnown RBP6.55□□□□□ -1.36
SCLT1-207ENST00000506233 IPPQ9Y573 584 aa6.55□□□□□ -1.36
SCLT1-207ENST00000506233 LAD1O00515 517 aa6.55□□□□□ -1.36
SCLT1-207ENST00000506233 SLC26A4O43511 780 aa6.55□□□□□ -1.36
SCLT1-207ENST00000506233 TRPA1O75762 1119 aa6.55□□□□□ -1.36
SCLT1-207ENST00000506233 ABLIM3O94929 683 aa6.55□□□□□ -1.36
SCLT1-207ENST00000506233 HOXB1P14653 301 aaPredicted RBP6.55□□□□□ -1.36
SCLT1-207ENST00000506233 TUBB8Q3ZCM7 444 aa6.55□□□□□ -1.36
SCLT1-207ENST00000506233 CERKLQ49MI3 558 aaPredicted RBP6.55□□□□□ -1.36
SCLT1-207ENST00000506233 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.55□□□□□ -1.36
SCLT1-207ENST00000506233 MLKLQ8NB16 471 aa6.55□□□□□ -1.36
SCLT1-207ENST00000506233 PARD3BQ8TEW8 1205 aa6.55□□□□□ -1.36
SCLT1-207ENST00000506233 UIMC1Q96RL1 719 aa6.55□□□□□ -1.36
SCLT1-207ENST00000506233 THSD7BQ9C0I4 1608 aa6.55□□□□□ -1.36
SCLT1-207ENST00000506233 CDV3Q9UKY7 258 aaKnown RBP6.55□□□□□ -1.36
SCLT1-207ENST00000506233 ZNF214Q9UL59 606 aaPredicted RBP6.55□□□□□ -1.36
SCLT1-207ENST00000506233 hCG_1984214I3L0E3 225 aa6.54□□□□□ -1.36
SCLT1-207ENST00000506233 NFIBO00712 420 aa6.54□□□□□ -1.36
SCLT1-207ENST00000506233 KINO60870 393 aaKnown RBP6.54□□□□□ -1.36
SCLT1-207ENST00000506233 OR52Z1P0C646 297 aa6.54□□□□□ -1.36
SCLT1-207ENST00000506233 ARP10275 920 aa6.54□□□□□ -1.36
SCLT1-207ENST00000506233 CCNFP41002 786 aa6.54□□□□□ -1.36
SCLT1-207ENST00000506233 SKOR1P84550 965 aa6.54□□□□□ -1.36
SCLT1-207ENST00000506233 LMNB2Q03252 620 aa6.54□□□□□ -1.36
SCLT1-207ENST00000506233 ORC2Q13416 577 aaPredicted RBP6.54□□□□□ -1.36
SCLT1-207ENST00000506233 SART3Q15020 963 aaKnown RBP6.54□□□□□ -1.36
SCLT1-207ENST00000506233 C1orf186Q6ZWK4 172 aa6.54□□□□□ -1.36
SCLT1-207ENST00000506233 ZNF713Q8N859 430 aaPredicted RBP6.54□□□□□ -1.36
SCLT1-207ENST00000506233 CTCFLQ8NI51 663 aaPredicted RBP6.54□□□□□ -1.36
SCLT1-207ENST00000506233 JPH3Q8WXH2 748 aaPredicted RBP6.54□□□□□ -1.36
SCLT1-207ENST00000506233 AGBL1Q96MI9 1066 aa6.54□□□□□ -1.36
SCLT1-207ENST00000506233 PCDHB10Q9UN67 800 aa6.54□□□□□ -1.36
SCLT1-207ENST00000506233 ZNF638Q14966 1978 aaKnown RBP6.54□□□□□ -1.36
SCLT1-207ENST00000506233 A0A1W2PP55 124 aa6.54□□□□□ -1.36
SCLT1-207ENST00000506233 A0A1W2PQH9 124 aa6.54□□□□□ -1.36
SCLT1-207ENST00000506233 METTL12A8MUP2 240 aa6.54□□□□□ -1.36
SCLT1-207ENST00000506233 E9PMD0 336 aa6.54□□□□□ -1.36
SCLT1-207ENST00000506233 ATP9AO75110 1047 aa6.54□□□□□ -1.36
SCLT1-207ENST00000506233 CCNE2O96020 404 aa6.54□□□□□ -1.36
SCLT1-207ENST00000506233 PLEKP08567 350 aaPredicted RBP6.54□□□□□ -1.36
SCLT1-207ENST00000506233 IDH3AP50213 366 aa6.54□□□□□ -1.36
SCLT1-207ENST00000506233 NLRP5P59047 1200 aa6.54□□□□□ -1.36
SCLT1-207ENST00000506233 PPP2R5CQ13362 524 aa6.54□□□□□ -1.36
SCLT1-207ENST00000506233 BMT2Q1RMZ1 405 aa6.54□□□□□ -1.36
SCLT1-207ENST00000506233 NBPF12Q5TAG4 269 aaPredicted RBP6.54□□□□□ -1.36
SCLT1-207ENST00000506233 MIGA2Q7L4E1 593 aa6.54□□□□□ -1.36
SCLT1-207ENST00000506233 TRIM42Q8IWZ5 723 aa6.54□□□□□ -1.36
SCLT1-207ENST00000506233 FAM178BQ8IXR5 827 aa6.54□□□□□ -1.36
SCLT1-207ENST00000506233 TRIM22Q8IYM9 498 aa6.54□□□□□ -1.36
SCLT1-207ENST00000506233 EEF2KMTQ96G04 330 aa6.54□□□□□ -1.36
SCLT1-207ENST00000506233 RUSC1Q9BVN2 902 aa6.54□□□□□ -1.36
SCLT1-207ENST00000506233 FAM50BQ9Y247 325 aa6.54□□□□□ -1.36
SCLT1-207ENST00000506233 MYH9P35579 1960 aaKnown RBP6.54□□□□□ -1.36
SCLT1-207ENST00000506233 TCP10L2B9ZVM9 353 aa6.54□□□□□ -1.36
SCLT1-207ENST00000506233 MEIS1O00470 390 aa6.54□□□□□ -1.36
SCLT1-207ENST00000506233 FAM189A1O60320 539 aa6.54□□□□□ -1.36
SCLT1-207ENST00000506233 PKN3Q6P5Z2 889 aa6.54□□□□□ -1.36
SCLT1-207ENST00000506233 AGMOQ6ZNB7 445 aa6.54□□□□□ -1.36
SCLT1-207ENST00000506233 SLC38A10Q9HBR0 1119 aa6.54□□□□□ -1.36
SCLT1-207ENST00000506233 DMAC2Q9NW81 257 aa6.54□□□□□ -1.36
SCLT1-207ENST00000506233 DDX20Q9UHI6 824 aaKnown RBP6.54□□□□□ -1.36
SCLT1-207ENST00000506233 PPP2R3BQ9Y5P8 575 aa6.54□□□□□ -1.36
SCLT1-207ENST00000506233 TLL2Q9Y6L7 1015 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms