RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 CWH43Q9H720 699 aa19.72■□□□□ 0.75
SMN1-204ENST00000506163 COL4A4P53420 1690 aaPredicted RBP19.72■□□□□ 0.75
SMN1-204ENST00000506163 KIAA1671Q9BY89 1806 aa19.72■□□□□ 0.75
SMN1-204ENST00000506163 H3BNC9 293 aa19.71■□□□□ 0.75
SMN1-204ENST00000506163 ERLIN2O94905 339 aa19.71■□□□□ 0.75
SMN1-204ENST00000506163 CTNNB1P35222 781 aa19.71■□□□□ 0.75
SMN1-204ENST00000506163 NPTX2P47972 431 aa19.71■□□□□ 0.75
SMN1-204ENST00000506163 AFF1P51825 1210 aaKnown RBP19.71■□□□□ 0.75
SMN1-204ENST00000506163 PEX3P56589 373 aa19.71■□□□□ 0.75
SMN1-204ENST00000506163 DHX8Q14562 1220 aaKnown RBP19.71■□□□□ 0.75
SMN1-204ENST00000506163 PCBP1Q15365 356 aaKnown RBP eCLIP19.71■□□□□ 0.75
SMN1-204ENST00000506163 FAM187BQ17R55 369 aa19.71■□□□□ 0.75
SMN1-204ENST00000506163 AGMOQ6ZNB7 445 aa19.71■□□□□ 0.75
SMN1-204ENST00000506163 DEPTORQ8TB45 409 aa19.71■□□□□ 0.75
SMN1-204ENST00000506163 SAMD11Q96NU1 681 aa19.71■□□□□ 0.75
SMN1-204ENST00000506163 PANK2Q9BZ23 570 aa19.71■□□□□ 0.75
SMN1-204ENST00000506163 RNF39Q9H2S5 420 aa19.71■□□□□ 0.75
SMN1-204ENST00000506163 A0A1B0GUA9 196 aa19.7■□□□□ 0.74
SMN1-204ENST00000506163 PPP6R2O75170 966 aa19.7■□□□□ 0.74
SMN1-204ENST00000506163 YEATS4O95619 227 aa19.7■□□□□ 0.74
SMN1-204ENST00000506163 AXLP30530 894 aa19.7■□□□□ 0.74
SMN1-204ENST00000506163 DDIT3P35638 169 aa19.7■□□□□ 0.74
SMN1-204ENST00000506163 GPM6BQ13491 265 aa19.7■□□□□ 0.74
SMN1-204ENST00000506163 PPP2R5AQ15172 486 aa19.7■□□□□ 0.74
SMN1-204ENST00000506163 CCDC85BQ15834 202 aaPredicted RBP19.7■□□□□ 0.74
SMN1-204ENST00000506163 AXDND1Q5T1B0 1012 aaPredicted RBP19.7■□□□□ 0.74
SMN1-204ENST00000506163 NOTUMQ6P988 496 aa19.7■□□□□ 0.74
SMN1-204ENST00000506163 TAS1R3Q7RTX0 852 aa19.7■□□□□ 0.74
SMN1-204ENST00000506163 IFT74Q96LB3 600 aa19.7■□□□□ 0.74
SMN1-204ENST00000506163 HES2Q9Y543 173 aa19.7■□□□□ 0.74
SMN1-204ENST00000506163 RALGAPA2Q2PPJ7 1873 aa19.7■□□□□ 0.74
SMN1-204ENST00000506163 GRM6O15303 877 aa19.69■□□□□ 0.74
SMN1-204ENST00000506163 OFD1O75665 1012 aa19.69■□□□□ 0.74
SMN1-204ENST00000506163 CAMK1Q14012 370 aa19.69■□□□□ 0.74
SMN1-204ENST00000506163 NT5DC1Q5TFE4 455 aa19.69■□□□□ 0.74
SMN1-204ENST00000506163 GPBP1Q86WP2 473 aa19.69■□□□□ 0.74
SMN1-204ENST00000506163 ZBTB8OSQ8IWT0 167 aa19.69■□□□□ 0.74
SMN1-204ENST00000506163 PPM1EQ8WY54 764 aa19.69■□□□□ 0.74
SMN1-204ENST00000506163 PRMT7Q9NVM4 692 aaPredicted RBP19.69■□□□□ 0.74
SMN1-204ENST00000506163 RNF216Q9NWF9 866 aaPredicted RBP19.69■□□□□ 0.74
SMN1-204ENST00000506163 IPPQ9Y573 584 aa19.69■□□□□ 0.74
SMN1-204ENST00000506163 ACKR2O00590 384 aa19.68■□□□□ 0.74
SMN1-204ENST00000506163 PRKCBP05771 671 aa19.68■□□□□ 0.74
SMN1-204ENST00000506163 RB1P06400 928 aa19.68■□□□□ 0.74
SMN1-204ENST00000506163 SKIP12755 728 aa19.68■□□□□ 0.74
SMN1-204ENST00000506163 LIG1P18858 919 aa19.68■□□□□ 0.74
SMN1-204ENST00000506163 RAB27AP51159 221 aa19.68■□□□□ 0.74
SMN1-204ENST00000506163 GIT2Q14161 759 aa19.68■□□□□ 0.74
SMN1-204ENST00000506163 BECN1Q14457 450 aa19.68■□□□□ 0.74
SMN1-204ENST00000506163 SHC4Q6S5L8 630 aa19.68■□□□□ 0.74
SMN1-204ENST00000506163 RASSF8Q8NHQ8 419 aa19.68■□□□□ 0.74
SMN1-204ENST00000506163 LARP4BQ92615 738 aaKnown RBP19.68■□□□□ 0.74
SMN1-204ENST00000506163 DRC1Q96MC2 740 aa19.68■□□□□ 0.74
SMN1-204ENST00000506163 REEP2Q9BRK0 252 aa19.68■□□□□ 0.74
SMN1-204ENST00000506163 NTPCRQ9BSD7 190 aaKnown RBP19.68■□□□□ 0.74
SMN1-204ENST00000506163 C2orf40Q9H1Z8 148 aa19.68■□□□□ 0.74
SMN1-204ENST00000506163 PDZD7Q9H5P4 517 aa19.68■□□□□ 0.74
SMN1-204ENST00000506163 ALG13Q9NP73 1137 aaKnown RBP19.68■□□□□ 0.74
SMN1-204ENST00000506163 PRDM6Q9NQX0 595 aa19.68■□□□□ 0.74
SMN1-204ENST00000506163 KCND2Q9NZV8 630 aa19.68■□□□□ 0.74
SMN1-204ENST00000506163 ARHGAP28Q9P2N2 729 aa19.68■□□□□ 0.74
SMN1-204ENST00000506163 PLAGL2Q9UPG8 496 aa19.68■□□□□ 0.74
SMN1-204ENST00000506163 CNTNAP2Q9UHC6 1331 aa19.68■□□□□ 0.74
SMN1-204ENST00000506163 CCDC169A6NNP5 214 aa19.68■□□□□ 0.74
SMN1-204ENST00000506163 HOXA2O43364 376 aa19.68■□□□□ 0.74
SMN1-204ENST00000506163 ITGB1P05556 798 aa19.68■□□□□ 0.74
SMN1-204ENST00000506163 NCLP19338 710 aaKnown RBP19.68■□□□□ 0.74
SMN1-204ENST00000506163 DNAJB1P25685 340 aa19.68■□□□□ 0.74
SMN1-204ENST00000506163 MAPK6Q16659 721 aa19.68■□□□□ 0.74
SMN1-204ENST00000506163 EEF1DP3Q658K8 133 aa19.68■□□□□ 0.74
SMN1-204ENST00000506163 KLHL23Q8NBE8 558 aa19.68■□□□□ 0.74
SMN1-204ENST00000506163 CCDC51Q96ER9 411 aa19.68■□□□□ 0.74
SMN1-204ENST00000506163 PRIMPOLQ96LW4 560 aa19.68■□□□□ 0.74
SMN1-204ENST00000506163 TIPINQ9BVW5 301 aa19.68■□□□□ 0.74
SMN1-204ENST00000506163 PLVAPQ9BX97 442 aa19.68■□□□□ 0.74
SMN1-204ENST00000506163 RCOR1Q9UKL0 485 aa19.68■□□□□ 0.74
SMN1-204ENST00000506163 PCDHA7Q9UN72 937 aa19.68■□□□□ 0.74
SMN1-204ENST00000506163 RWDD3Q9Y3V2 267 aa19.68■□□□□ 0.74
SMN1-204ENST00000506163 MYH11P35749 1972 aa19.67■□□□□ 0.74
SMN1-204ENST00000506163 SLC16A4O15374 487 aa19.67■□□□□ 0.74
SMN1-204ENST00000506163 B4GALT3O60512 393 aa19.67■□□□□ 0.74
SMN1-204ENST00000506163 NPTXRO95502 500 aa19.67■□□□□ 0.74
SMN1-204ENST00000506163 PLS3P13797 630 aa19.67■□□□□ 0.74
SMN1-204ENST00000506163 PBX3P40426 434 aa19.67■□□□□ 0.74
SMN1-204ENST00000506163 NCBP1Q09161 790 aaKnown RBP19.67■□□□□ 0.74
SMN1-204ENST00000506163 DMP1Q13316 513 aaPredicted RBP19.67■□□□□ 0.74
SMN1-204ENST00000506163 PRPF4BQ13523 1007 aaKnown RBP19.67■□□□□ 0.74
SMN1-204ENST00000506163 RRAGBQ5VZM2 374 aa19.67■□□□□ 0.74
SMN1-204ENST00000506163 ATL3Q6DD88 541 aa19.67■□□□□ 0.74
SMN1-204ENST00000506163 MICALL1Q8N3F8 863 aa19.67■□□□□ 0.74
SMN1-204ENST00000506163 COLGALT1Q8NBJ5 622 aa19.67■□□□□ 0.74
SMN1-204ENST00000506163 TMEM161BQ8NDZ6 487 aa19.67■□□□□ 0.74
SMN1-204ENST00000506163 SPPL3Q8TCT6 385 aa19.67■□□□□ 0.74
SMN1-204ENST00000506163 SPIRE2Q8WWL2 714 aa19.67■□□□□ 0.74
SMN1-204ENST00000506163 NXF3Q9H4D5 531 aaKnown RBP19.67■□□□□ 0.74
SMN1-204ENST00000506163 C17orf75Q9HAS0 396 aa19.67■□□□□ 0.74
SMN1-204ENST00000506163 KMT5AQ9NQR1 393 aa19.67■□□□□ 0.74
SMN1-204ENST00000506163 K7ERI5 159 aa19.66■□□□□ 0.74
SMN1-204ENST00000506163 CUTAO60888 179 aa19.66■□□□□ 0.74
SMN1-204ENST00000506163 ZNF131P52739 623 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms