RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 C1orf112Q9NSG2 853 aa8.05□□□□□ -1.12
VCAN-206ENST00000505615 TMEM161AQ9NX61 479 aa8.05□□□□□ -1.12
VCAN-206ENST00000505615 ERAP1Q9NZ08 941 aa8.05□□□□□ -1.12
VCAN-206ENST00000505615 SPG21Q9NZD8 308 aa8.05□□□□□ -1.12
VCAN-206ENST00000505615 FKBPLQ9UIM3 349 aa8.05□□□□□ -1.12
VCAN-206ENST00000505615 SMG5Q9UPR3 1016 aaKnown RBP8.05□□□□□ -1.12
VCAN-206ENST00000505615 NOC2LQ9Y3T9 749 aaKnown RBP8.05□□□□□ -1.12
VCAN-206ENST00000505615 PCDHA2Q9Y5H9 948 aa8.05□□□□□ -1.12
VCAN-206ENST00000505615 ASH1LQ9NR48 2969 aaKnown RBP8.05□□□□□ -1.12
VCAN-206ENST00000505615 GREB1Q4ZG55 1949 aa8.04□□□□□ -1.12
VCAN-206ENST00000505615 CDC14CA4D256 554 aa8.04□□□□□ -1.12
VCAN-206ENST00000505615 RRN3P2A6NIE6 340 aa8.04□□□□□ -1.12
VCAN-206ENST00000505615 GCOM1H8Y6P7 765 aaPredicted RBP8.04□□□□□ -1.12
VCAN-206ENST00000505615 M0QZ92 97 aa8.04□□□□□ -1.12
VCAN-206ENST00000505615 DHX16O60231 1041 aaKnown RBP8.04□□□□□ -1.12
VCAN-206ENST00000505615 LILRB5O75023 590 aa8.04□□□□□ -1.12
VCAN-206ENST00000505615 ATP9AO75110 1047 aa8.04□□□□□ -1.12
VCAN-206ENST00000505615 LRRN2O75325 713 aa8.04□□□□□ -1.12
VCAN-206ENST00000505615 POLR2MP0CAP2 368 aa8.04□□□□□ -1.12
VCAN-206ENST00000505615 KCNA2P16389 499 aa8.04□□□□□ -1.12
VCAN-206ENST00000505615 DSC3Q14574 896 aa8.04□□□□□ -1.12
VCAN-206ENST00000505615 ZNF528Q3MIS6 628 aa8.04□□□□□ -1.12
VCAN-206ENST00000505615 LRRC43Q8N309 656 aa8.04□□□□□ -1.12
VCAN-206ENST00000505615 CCDC82Q8N4S0 544 aa8.04□□□□□ -1.12
VCAN-206ENST00000505615 PJA1Q8NG27 643 aa8.04□□□□□ -1.12
VCAN-206ENST00000505615 GPR152Q8TDT2 470 aa8.04□□□□□ -1.12
VCAN-206ENST00000505615 TRAIPQ9BWF2 469 aa8.04□□□□□ -1.12
VCAN-206ENST00000505615 FOXQ1Q9C009 403 aa8.04□□□□□ -1.12
VCAN-206ENST00000505615 EPC1Q9H2F5 836 aa8.04□□□□□ -1.12
VCAN-206ENST00000505615 ELAC1Q9H777 363 aaKnown RBP8.04□□□□□ -1.12
VCAN-206ENST00000505615 SFXN1Q9H9B4 322 aa8.04□□□□□ -1.12
VCAN-206ENST00000505615 ATP6V0A4Q9HBG4 840 aa8.04□□□□□ -1.12
VCAN-206ENST00000505615 RTEL1Q9NZ71 1219 aa8.04□□□□□ -1.12
VCAN-206ENST00000505615 SIT1Q9Y3P8 196 aa8.04□□□□□ -1.12
VCAN-206ENST00000505615 IRAK3Q9Y616 596 aa8.04□□□□□ -1.12
VCAN-206ENST00000505615 SMG1Q96Q15 3661 aaKnown RBP8.04□□□□□ -1.12
VCAN-206ENST00000505615 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.03□□□□□ -1.12
VCAN-206ENST00000505615 DENND3A2RUS2 1198 aa8.03□□□□□ -1.12
VCAN-206ENST00000505615 SLC30A4O14863 429 aa8.03□□□□□ -1.12
VCAN-206ENST00000505615 ZBTB5O15062 677 aa8.03□□□□□ -1.12
VCAN-206ENST00000505615 CXCL14O95715 111 aa8.03□□□□□ -1.12
VCAN-206ENST00000505615 PARP1P09874 1014 aaKnown RBP8.03□□□□□ -1.12
VCAN-206ENST00000505615 PCP11498 1178 aaKnown RBP8.03□□□□□ -1.12
VCAN-206ENST00000505615 SRFP11831 508 aa8.03□□□□□ -1.12
VCAN-206ENST00000505615 RFX1P22670 979 aa8.03□□□□□ -1.12
VCAN-206ENST00000505615 PMLP29590 882 aa8.03□□□□□ -1.12
VCAN-206ENST00000505615 RELBQ01201 579 aa8.03□□□□□ -1.12
VCAN-206ENST00000505615 KRT17Q04695 432 aa8.03□□□□□ -1.12
VCAN-206ENST00000505615 COL9A3Q14050 684 aaPredicted RBP8.03□□□□□ -1.12
VCAN-206ENST00000505615 GAS6Q14393 721 aa8.03□□□□□ -1.12
VCAN-206ENST00000505615 CLLU1OSQ5K130 101 aa8.03□□□□□ -1.12
VCAN-206ENST00000505615 FAM43BQ6ZT52 329 aaPredicted RBP8.03□□□□□ -1.12
VCAN-206ENST00000505615 FAM228AQ86W67 206 aa8.03□□□□□ -1.12
VCAN-206ENST00000505615 TMEM173Q86WV6 379 aaPredicted RBP8.03□□□□□ -1.12
VCAN-206ENST00000505615 SLC44A3Q8N4M1 653 aa8.03□□□□□ -1.12
VCAN-206ENST00000505615 ENAHQ8N8S7 591 aaPredicted RBP8.03□□□□□ -1.12
VCAN-206ENST00000505615 ZBTB44Q8NCP5 570 aa8.03□□□□□ -1.12
VCAN-206ENST00000505615 OTUD7AQ8TE49 926 aaPredicted RBP8.03□□□□□ -1.12
VCAN-206ENST00000505615 SEPT1Q8WYJ6 367 aa8.03□□□□□ -1.12
VCAN-206ENST00000505615 NELL1Q92832 810 aa8.03□□□□□ -1.12
VCAN-206ENST00000505615 GLG1Q92896 1179 aa8.03□□□□□ -1.12
VCAN-206ENST00000505615 BORCS6Q96GS4 357 aa8.03□□□□□ -1.12
VCAN-206ENST00000505615 KDM4CQ9H3R0 1056 aa8.03□□□□□ -1.12
VCAN-206ENST00000505615 SMARCAD1Q9H4L7 1026 aa8.03□□□□□ -1.12
VCAN-206ENST00000505615 KAT14Q9H8E8 782 aa8.03□□□□□ -1.12
VCAN-206ENST00000505615 ARHGEF3Q9NR81 526 aa8.03□□□□□ -1.12
VCAN-206ENST00000505615 SH2B1Q9NRF2 756 aaPredicted RBP8.03□□□□□ -1.12
VCAN-206ENST00000505615 DDX19BQ9UMR2 479 aa8.03□□□□□ -1.12
VCAN-206ENST00000505615 USP18Q9UMW8 372 aa8.03□□□□□ -1.12
VCAN-206ENST00000505615 ST3GAL5Q9UNP4 418 aa8.03□□□□□ -1.12
VCAN-206ENST00000505615 PCDHGA2Q9Y5H1 932 aa8.03□□□□□ -1.12
VCAN-206ENST00000505615 NBEAQ8NFP9 2946 aa8.03□□□□□ -1.12
VCAN-206ENST00000505615 TTC41PQ6P2S7 1318 aa8.03□□□□□ -1.12
VCAN-206ENST00000505615 DMXL2Q8TDJ6 3036 aa8.03□□□□□ -1.12
VCAN-206ENST00000505615 AKAP13Q12802 2813 aa8.02□□□□□ -1.12
VCAN-206ENST00000505615 A0A0D9SFI3 127 aa8.02□□□□□ -1.13
VCAN-206ENST00000505615 SMIM35A0A1B0GVV1 85 aa8.02□□□□□ -1.13
VCAN-206ENST00000505615 NT5C1B-RDH14C9J2C7 533 aa8.02□□□□□ -1.13
VCAN-206ENST00000505615 RPS6KA5O75582 802 aa8.02□□□□□ -1.13
VCAN-206ENST00000505615 CTSAP10619 480 aa8.02□□□□□ -1.13
VCAN-206ENST00000505615 CDK11BP21127 795 aaKnown RBP8.02□□□□□ -1.13
VCAN-206ENST00000505615 SRSF11Q05519 484 aaKnown RBP8.02□□□□□ -1.13
VCAN-206ENST00000505615 WTAPQ15007 396 aa8.02□□□□□ -1.13
VCAN-206ENST00000505615 PLCB4Q15147 1175 aa8.02□□□□□ -1.13
VCAN-206ENST00000505615 LETM2Q2VYF4 491 aa8.02□□□□□ -1.13
VCAN-206ENST00000505615 FOXD4L5Q5VV16 416 aaPredicted RBP8.02□□□□□ -1.13
VCAN-206ENST00000505615 PCNX4Q63HM2 1172 aa8.02□□□□□ -1.13
VCAN-206ENST00000505615 MTHFD1LQ6UB35 978 aa8.02□□□□□ -1.13
VCAN-206ENST00000505615 LYPD4Q6UWN0 246 aa8.02□□□□□ -1.13
VCAN-206ENST00000505615 MFSD6Q6ZSS7 791 aa8.02□□□□□ -1.13
VCAN-206ENST00000505615 ZNF589Q86UQ0 364 aaPredicted RBP8.02□□□□□ -1.13
VCAN-206ENST00000505615 CABP7Q86V35 215 aa8.02□□□□□ -1.13
VCAN-206ENST00000505615 VPS52Q8N1B4 723 aa8.02□□□□□ -1.13
VCAN-206ENST00000505615 KDF1Q8NAX2 398 aaPredicted RBP8.02□□□□□ -1.13
VCAN-206ENST00000505615 BCL7CQ8WUZ0 217 aaPredicted RBP8.02□□□□□ -1.13
VCAN-206ENST00000505615 MYADMQ96S97 322 aa8.02□□□□□ -1.13
VCAN-206ENST00000505615 VN1R3Q9BXE9 311 aa8.02□□□□□ -1.13
VCAN-206ENST00000505615 SLC2A4RGQ9NR83 387 aa8.02□□□□□ -1.13
VCAN-206ENST00000505615 EPS15L1Q9UBC2 864 aa8.02□□□□□ -1.13
VCAN-206ENST00000505615 FBXO4Q9UKT5 387 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms