RNA–Protein interactions for RNA: ENST00000505081.5

DDX41-205, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,949 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-205ENST00000505081 PRELID2Q8N945 189 aa17.3■□□□□ 0.36
DDX41-205ENST00000505081 SEL1LQ9UBV2 794 aa17.3■□□□□ 0.36
DDX41-205ENST00000505081 RBBP6Q7Z6E9 1792 aaKnown RBP17.3■□□□□ 0.36
DDX41-205ENST00000505081 SLX4Q8IY92 1834 aa17.29■□□□□ 0.36
DDX41-205ENST00000505081 GOLGA8IPA6NC78 632 aa17.29■□□□□ 0.36
DDX41-205ENST00000505081 GOLGA8JA6NMD2 632 aa17.29■□□□□ 0.36
DDX41-205ENST00000505081 C1orf220Q5T0J3 134 aa17.29■□□□□ 0.36
DDX41-205ENST00000505081 STRA6Q9BX79 667 aa17.29■□□□□ 0.36
DDX41-205ENST00000505081 GLIS2Q9BZE0 524 aaPredicted RBP17.29■□□□□ 0.36
DDX41-205ENST00000505081 OSBPL7Q9BZF2 842 aa17.29■□□□□ 0.36
DDX41-205ENST00000505081 SERPINA10Q9UK55 444 aa17.29■□□□□ 0.36
DDX41-205ENST00000505081 GOLGA6L10A0A0M3HER8 536 aa17.29■□□□□ 0.36
DDX41-205ENST00000505081 COMTP21964 271 aa17.29■□□□□ 0.36
DDX41-205ENST00000505081 RPL21P46778 160 aaKnown RBP17.29■□□□□ 0.36
DDX41-205ENST00000505081 GRIPAP1Q4V328 841 aa17.29■□□□□ 0.36
DDX41-205ENST00000505081 SUGP1Q8IWZ8 645 aaKnown RBP17.29■□□□□ 0.36
DDX41-205ENST00000505081 CCDC13Q8IYE1 715 aa17.29■□□□□ 0.36
DDX41-205ENST00000505081 SEC16BQ96JE7 1060 aa17.29■□□□□ 0.36
DDX41-205ENST00000505081 ODF2LQ9ULJ1 636 aa17.29■□□□□ 0.36
DDX41-205ENST00000505081 ANKRD63C9JTQ0 380 aa17.28■□□□□ 0.36
DDX41-205ENST00000505081 VIL1P09327 827 aaKnown RBP17.28■□□□□ 0.36
DDX41-205ENST00000505081 ITGB5P18084 799 aa17.28■□□□□ 0.36
DDX41-205ENST00000505081 PDE6BP35913 854 aa17.28■□□□□ 0.36
DDX41-205ENST00000505081 PTGIRP43119 386 aa17.28■□□□□ 0.36
DDX41-205ENST00000505081 VAMP7P51809 220 aa17.28■□□□□ 0.36
DDX41-205ENST00000505081 MNAT1P51948 309 aa17.28■□□□□ 0.36
DDX41-205ENST00000505081 PMS2P54278 862 aa17.28■□□□□ 0.36
DDX41-205ENST00000505081 STXBP4Q6ZWJ1 553 aa17.28■□□□□ 0.36
DDX41-205ENST00000505081 MRIQ9BWK5 157 aa17.28■□□□□ 0.36
DDX41-205ENST00000505081 TEKT3Q9BXF9 490 aa17.28■□□□□ 0.36
DDX41-205ENST00000505081 SEMA4AQ9H3S1 761 aa17.28■□□□□ 0.36
DDX41-205ENST00000505081 GRHL1Q9NZI5 618 aa17.28■□□□□ 0.36
DDX41-205ENST00000505081 PTPN22Q9Y2R2 807 aa17.28■□□□□ 0.36
DDX41-205ENST00000505081 KCNJ1P48048 391 aa17.28■□□□□ 0.36
DDX41-205ENST00000505081 IFI35P80217 286 aaPredicted RBP17.28■□□□□ 0.36
DDX41-205ENST00000505081 SLC29A2Q14542 456 aa17.28■□□□□ 0.36
DDX41-205ENST00000505081 YTHDF3Q7Z739 585 aaKnown RBP17.28■□□□□ 0.36
DDX41-205ENST00000505081 IL31RAQ8NI17 732 aa17.28■□□□□ 0.36
DDX41-205ENST00000505081 TLCD1Q96CP7 247 aa17.28■□□□□ 0.36
DDX41-205ENST00000505081 DNM1LO00429 736 aa17.27■□□□□ 0.36
DDX41-205ENST00000505081 CALCAP01258 141 aa17.27■□□□□ 0.36
DDX41-205ENST00000505081 CCDC172P0C7W6 258 aa17.27■□□□□ 0.36
DDX41-205ENST00000505081 PYGMP11217 842 aa17.27■□□□□ 0.36
DDX41-205ENST00000505081 SLCO1A2P46721 670 aa17.27■□□□□ 0.36
DDX41-205ENST00000505081 ACTN3Q08043 901 aaPredicted RBP17.27■□□□□ 0.36
DDX41-205ENST00000505081 NOP9Q86U38 636 aaKnown RBP17.27■□□□□ 0.36
DDX41-205ENST00000505081 NLGN1Q8N2Q7 840 aa17.27■□□□□ 0.36
DDX41-205ENST00000505081 CABS1Q96KC9 395 aa17.27■□□□□ 0.36
DDX41-205ENST00000505081 SELENOSQ9BQE4 189 aa17.27■□□□□ 0.36
DDX41-205ENST00000505081 WDR11Q9BZH6 1224 aa17.27■□□□□ 0.36
DDX41-205ENST00000505081 AZI2Q9H6S1 392 aa17.27■□□□□ 0.36
DDX41-205ENST00000505081 GPRC5CQ9NQ84 441 aa17.27■□□□□ 0.36
DDX41-205ENST00000505081 RPTORQ8N122 1335 aa17.27■□□□□ 0.36
DDX41-205ENST00000505081 ONECUT3O60422 494 aaPredicted RBP17.27■□□□□ 0.36
DDX41-205ENST00000505081 BCRP11274 1271 aa17.27■□□□□ 0.36
DDX41-205ENST00000505081 CHRNB2P17787 502 aa17.27■□□□□ 0.36
DDX41-205ENST00000505081 FGFR4P22455 802 aa17.27■□□□□ 0.36
DDX41-205ENST00000505081 NSMFQ6X4W1 530 aa17.27■□□□□ 0.36
DDX41-205ENST00000505081 CCDC121Q6ZUS5 278 aa17.27■□□□□ 0.36
DDX41-205ENST00000505081 AGBL1Q96MI9 1066 aa17.27■□□□□ 0.36
DDX41-205ENST00000505081 POP1Q99575 1024 aaKnown RBP17.27■□□□□ 0.36
DDX41-205ENST00000505081 ZSWIM1Q9BR11 485 aa17.27■□□□□ 0.36
DDX41-205ENST00000505081 VCPKMTQ9H867 229 aa17.27■□□□□ 0.36
DDX41-205ENST00000505081 ARHGEF10LQ9HCE6 1279 aa17.27■□□□□ 0.36
DDX41-205ENST00000505081 UBE4BO95155 1302 aa17.27■□□□□ 0.35
DDX41-205ENST00000505081 CHRNA5P30532 468 aa17.27■□□□□ 0.35
DDX41-205ENST00000505081 B3GNT9Q6UX72 402 aa17.27■□□□□ 0.35
DDX41-205ENST00000505081 MIGA2Q7L4E1 593 aa17.27■□□□□ 0.35
DDX41-205ENST00000505081 SLC47A2Q86VL8 602 aa17.27■□□□□ 0.35
DDX41-205ENST00000505081 FAM84AQ96KN4 292 aa17.27■□□□□ 0.35
DDX41-205ENST00000505081 NAP1L3Q99457 506 aaPredicted RBP17.27■□□□□ 0.35
DDX41-205ENST00000505081 COL20A1Q9P218 1284 aa17.27■□□□□ 0.35
DDX41-205ENST00000505081 DIS3Q9Y2L1 958 aaKnown RBP17.27■□□□□ 0.35
DDX41-205ENST00000505081 TMX2Q9Y320 296 aa17.27■□□□□ 0.35
DDX41-205ENST00000505081 ATRNL1Q5VV63 1379 aa17.26■□□□□ 0.35
DDX41-205ENST00000505081 CYP26A1O43174 497 aa17.26■□□□□ 0.35
DDX41-205ENST00000505081 PHF2O75151 1096 aa17.26■□□□□ 0.35
DDX41-205ENST00000505081 GPC5P78333 572 aa17.26■□□□□ 0.35
DDX41-205ENST00000505081 MIER3Q7Z3K6 550 aa17.26■□□□□ 0.35
DDX41-205ENST00000505081 CPLX4Q7Z7G2 160 aa17.26■□□□□ 0.35
DDX41-205ENST00000505081 LDHDQ86WU2 507 aa17.26■□□□□ 0.35
DDX41-205ENST00000505081 SLC9A9Q8IVB4 645 aa17.26■□□□□ 0.35
DDX41-205ENST00000505081 RHOT2Q8IXI1 618 aa17.26■□□□□ 0.35
DDX41-205ENST00000505081 NEK9Q8TD19 979 aa17.26■□□□□ 0.35
DDX41-205ENST00000505081 PABPC3Q9H361 631 aaKnown RBP17.26■□□□□ 0.35
DDX41-205ENST00000505081 ENTPD3O75355 529 aa17.26■□□□□ 0.35
DDX41-205ENST00000505081 CHN1P15882 459 aa17.26■□□□□ 0.35
DDX41-205ENST00000505081 PEX5P50542 639 aa17.26■□□□□ 0.35
DDX41-205ENST00000505081 MAP2K1Q02750 393 aaPredicted RBP17.26■□□□□ 0.35
DDX41-205ENST00000505081 EPC2Q52LR7 807 aa17.26■□□□□ 0.35
DDX41-205ENST00000505081 EPS8L3Q8TE67 593 aaKnown RBP17.26■□□□□ 0.35
DDX41-205ENST00000505081 TATDN2Q93075 761 aa17.26■□□□□ 0.35
DDX41-205ENST00000505081 MTFR1LQ9H019 292 aa17.26■□□□□ 0.35
DDX41-205ENST00000505081 RANBP17Q9H2T7 1088 aaKnown RBP17.26■□□□□ 0.35
DDX41-205ENST00000505081 HSPBP1Q9NZL4 362 aa17.26■□□□□ 0.35
DDX41-205ENST00000505081 ZHX2Q9Y6X8 837 aa17.26■□□□□ 0.35
DDX41-205ENST00000505081 GOLGA6L7A0A1B0GV03 622 aa17.25■□□□□ 0.35
DDX41-205ENST00000505081 FAM187AA6NFU0 413 aa17.25■□□□□ 0.35
DDX41-205ENST00000505081 SRRM3A6NNA2 597 aaPredicted RBP17.25■□□□□ 0.35
DDX41-205ENST00000505081 CTNND1O60716 968 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms