RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 RSPH3Q86UC2 560 aa9.14□□□□□ -0.95
CDC42SE2-208ENST00000505065 SFR1Q86XK3 245 aa9.14□□□□□ -0.95
CDC42SE2-208ENST00000505065 A0A087WZ62 844 aa9.14□□□□□ -0.95
CDC42SE2-208ENST00000505065 A0A0B4J269 797 aa9.14□□□□□ -0.95
CDC42SE2-208ENST00000505065 KIAA0391O15091 583 aaKnown RBP9.14□□□□□ -0.95
CDC42SE2-208ENST00000505065 PMM2O15305 246 aa9.14□□□□□ -0.95
CDC42SE2-208ENST00000505065 ZBTB6Q15916 424 aa9.14□□□□□ -0.95
CDC42SE2-208ENST00000505065 KSR1Q8IVT5 923 aa9.14□□□□□ -0.95
CDC42SE2-208ENST00000505065 GLIS3Q8NEA6 775 aa9.14□□□□□ -0.95
CDC42SE2-208ENST00000505065 FDXACB1Q9BRP7 624 aaPredicted RBP9.14□□□□□ -0.95
CDC42SE2-208ENST00000505065 HSD3B7Q9H2F3 369 aa9.14□□□□□ -0.95
CDC42SE2-208ENST00000505065 C1orf112Q9NSG2 853 aa9.14□□□□□ -0.95
CDC42SE2-208ENST00000505065 A0A087WWV3 80 aa9.13□□□□□ -0.95
CDC42SE2-208ENST00000505065 ABHD14A-ACY1A0A1B0GW23 586 aa9.13□□□□□ -0.95
CDC42SE2-208ENST00000505065 MARCH6O60337 910 aa9.13□□□□□ -0.95
CDC42SE2-208ENST00000505065 GARTP22102 1010 aa9.13□□□□□ -0.95
CDC42SE2-208ENST00000505065 DNM2P50570 870 aa9.13□□□□□ -0.95
CDC42SE2-208ENST00000505065 ODR4Q5SWX8 454 aa9.13□□□□□ -0.95
CDC42SE2-208ENST00000505065 LIMS2Q7Z4I7 341 aa9.13□□□□□ -0.95
CDC42SE2-208ENST00000505065 CEP57L1Q8IYX8 460 aa9.13□□□□□ -0.95
CDC42SE2-208ENST00000505065 PQBP1O60828 265 aaKnown RBP9.13□□□□□ -0.95
CDC42SE2-208ENST00000505065 CD44P16070 742 aaKnown RBP9.13□□□□□ -0.95
CDC42SE2-208ENST00000505065 PPP1R2P41236 205 aa9.13□□□□□ -0.95
CDC42SE2-208ENST00000505065 STK4Q13043 487 aa9.13□□□□□ -0.95
CDC42SE2-208ENST00000505065 PPIGQ13427 754 aaKnown RBP eCLIP9.13□□□□□ -0.95
CDC42SE2-208ENST00000505065 PNOCQ13519 176 aa9.13□□□□□ -0.95
CDC42SE2-208ENST00000505065 RNF168Q8IYW5 571 aaPredicted RBP9.13□□□□□ -0.95
CDC42SE2-208ENST00000505065 PPP1R13LQ8WUF5 828 aa9.13□□□□□ -0.95
CDC42SE2-208ENST00000505065 CDK5RAP3Q96JB5 506 aa9.13□□□□□ -0.95
CDC42SE2-208ENST00000505065 GCOM2Q9BZD3 368 aaPredicted RBP9.13□□□□□ -0.95
CDC42SE2-208ENST00000505065 INO80BQ9C086 356 aaPredicted RBP9.13□□□□□ -0.95
CDC42SE2-208ENST00000505065 TBC1D7Q9P0N9 293 aa9.13□□□□□ -0.95
CDC42SE2-208ENST00000505065 PCDHA5Q9Y5H7 936 aa9.13□□□□□ -0.95
CDC42SE2-208ENST00000505065 NLRP11P59045 1033 aaKnown RBP9.13□□□□□ -0.95
CDC42SE2-208ENST00000505065 EDRF1Q3B7T1 1238 aa9.13□□□□□ -0.95
CDC42SE2-208ENST00000505065 CCDC65Q8IXS2 484 aa9.13□□□□□ -0.95
CDC42SE2-208ENST00000505065 CNNM3Q8NE01 707 aa9.13□□□□□ -0.95
CDC42SE2-208ENST00000505065 GSTCDQ8NEC7 633 aa9.13□□□□□ -0.95
CDC42SE2-208ENST00000505065 SH2D3AQ9BRG2 576 aa9.13□□□□□ -0.95
CDC42SE2-208ENST00000505065 PADI3Q9ULW8 664 aa9.13□□□□□ -0.95
CDC42SE2-208ENST00000505065 GPR182O15218 404 aa9.12□□□□□ -0.95
CDC42SE2-208ENST00000505065 ARF4P18085 180 aaPredicted RBP9.12□□□□□ -0.95
CDC42SE2-208ENST00000505065 THPOP40225 353 aa9.12□□□□□ -0.95
CDC42SE2-208ENST00000505065 DMP1Q13316 513 aaPredicted RBP9.12□□□□□ -0.95
CDC42SE2-208ENST00000505065 HAUS6Q7Z4H7 955 aa9.12□□□□□ -0.95
CDC42SE2-208ENST00000505065 MAP7D2Q96T17 732 aa9.12□□□□□ -0.95
CDC42SE2-208ENST00000505065 LARSQ9P2J5 1176 aaKnown RBP9.12□□□□□ -0.95
CDC42SE2-208ENST00000505065 A0A0U1RQF3 1178 aa9.12□□□□□ -0.95
CDC42SE2-208ENST00000505065 ENPP3O14638 875 aa9.12□□□□□ -0.95
CDC42SE2-208ENST00000505065 EOMESO95936 686 aa9.12□□□□□ -0.95
CDC42SE2-208ENST00000505065 MYBP10242 640 aa9.12□□□□□ -0.95
CDC42SE2-208ENST00000505065 MCF2P10911 925 aa9.12□□□□□ -0.95
CDC42SE2-208ENST00000505065 CASP1P29466 404 aa9.12□□□□□ -0.95
CDC42SE2-208ENST00000505065 CCDC183Q5T5S1 534 aa9.12□□□□□ -0.95
CDC42SE2-208ENST00000505065 LRRC55Q6ZSA7 311 aa9.12□□□□□ -0.95
CDC42SE2-208ENST00000505065 CKAP2LQ8IYA6 745 aa9.12□□□□□ -0.95
CDC42SE2-208ENST00000505065 SEMA6BQ9H3T3 888 aa9.12□□□□□ -0.95
CDC42SE2-208ENST00000505065 TMEM39AQ9NV64 488 aa9.12□□□□□ -0.95
CDC42SE2-208ENST00000505065 RMND1Q9NWS8 449 aa9.12□□□□□ -0.95
CDC42SE2-208ENST00000505065 PDXKO00764 312 aa9.12□□□□□ -0.95
CDC42SE2-208ENST00000505065 CYP2C18P33260 490 aa9.12□□□□□ -0.95
CDC42SE2-208ENST00000505065 GRM5P41594 1212 aa9.12□□□□□ -0.95
CDC42SE2-208ENST00000505065 FPGSQ05932 587 aa9.12□□□□□ -0.95
CDC42SE2-208ENST00000505065 TTI2Q6NXR4 508 aa9.12□□□□□ -0.95
CDC42SE2-208ENST00000505065 RHPN2Q8IUC4 686 aa9.12□□□□□ -0.95
CDC42SE2-208ENST00000505065 TMEM199Q8N511 208 aa9.12□□□□□ -0.95
CDC42SE2-208ENST00000505065 PLIN2Q99541 437 aa9.12□□□□□ -0.95
CDC42SE2-208ENST00000505065 CNTN3Q9P232 1028 aa9.12□□□□□ -0.95
CDC42SE2-208ENST00000505065 ST3GAL5Q9UNP4 418 aa9.12□□□□□ -0.95
CDC42SE2-208ENST00000505065 ATP11BQ9Y2G3 1177 aa9.12□□□□□ -0.95
CDC42SE2-208ENST00000505065 N4BP3O15049 544 aa9.12□□□□□ -0.95
CDC42SE2-208ENST00000505065 RAB27AP51159 221 aa9.12□□□□□ -0.95
CDC42SE2-208ENST00000505065 SKOR2Q2VWA4 1001 aaPredicted RBP9.12□□□□□ -0.95
CDC42SE2-208ENST00000505065 DCAF4L1Q3SXM0 396 aa9.12□□□□□ -0.95
CDC42SE2-208ENST00000505065 FOXD4L6Q3SYB3 417 aaPredicted RBP9.12□□□□□ -0.95
CDC42SE2-208ENST00000505065 FAM102BQ5T8I3 360 aa9.12□□□□□ -0.95
CDC42SE2-208ENST00000505065 PSRC1Q6PGN9 363 aaPredicted RBP9.12□□□□□ -0.95
CDC42SE2-208ENST00000505065 FOXD4L3Q6VB84 417 aaPredicted RBP9.12□□□□□ -0.95
CDC42SE2-208ENST00000505065 C15orf39Q6ZRI6 1047 aa9.12□□□□□ -0.95
CDC42SE2-208ENST00000505065 MFSD14AQ96MC6 490 aa9.12□□□□□ -0.95
CDC42SE2-208ENST00000505065 CPSF3Q9UKF6 684 aaKnown RBP9.12□□□□□ -0.95
CDC42SE2-208ENST00000505065 DERAQ9Y315 318 aa9.12□□□□□ -0.95
CDC42SE2-208ENST00000505065 KCNE1P15382 129 aa9.11□□□□□ -0.95
CDC42SE2-208ENST00000505065 SFPQP23246 707 aaKnown RBP eCLIP9.11□□□□□ -0.95
CDC42SE2-208ENST00000505065 WDR5P61964 334 aaKnown RBP9.11□□□□□ -0.95
CDC42SE2-208ENST00000505065 KYAT1Q16773 422 aa9.11□□□□□ -0.95
CDC42SE2-208ENST00000505065 KIZQ2M2Z5 673 aa9.11□□□□□ -0.95
CDC42SE2-208ENST00000505065 RNF149Q8NC42 400 aa9.11□□□□□ -0.95
CDC42SE2-208ENST00000505065 OSMRQ99650 979 aa9.11□□□□□ -0.95
CDC42SE2-208ENST00000505065 DUSP9Q99956 384 aaKnown RBP9.11□□□□□ -0.95
CDC42SE2-208ENST00000505065 TMEM206Q9H813 350 aa9.11□□□□□ -0.95
CDC42SE2-208ENST00000505065 CCDC85CA6NKD9 419 aa9.11□□□□□ -0.95
CDC42SE2-208ENST00000505065 PEX3P56589 373 aa9.11□□□□□ -0.95
CDC42SE2-208ENST00000505065 ZNF445P59923 1031 aa9.11□□□□□ -0.95
CDC42SE2-208ENST00000505065 FAM26FQ5R3K3 315 aa9.11□□□□□ -0.95
CDC42SE2-208ENST00000505065 DPY19L2P1Q6NXN4 242 aa9.11□□□□□ -0.95
CDC42SE2-208ENST00000505065 BADQ92934 168 aa9.11□□□□□ -0.95
CDC42SE2-208ENST00000505065 TOP1MTQ969P6 601 aa9.11□□□□□ -0.95
CDC42SE2-208ENST00000505065 DHTKD1Q96HY7 919 aaPredicted RBP9.11□□□□□ -0.95
CDC42SE2-208ENST00000505065 KMT5AQ9NQR1 393 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms