RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 HNRNPLP14866 589 aaKnown RBP eCLIP6.81□□□□□ -1.32
DEPDC1B-203ENST00000505017 BPIFB4P59827 614 aa6.81□□□□□ -1.32
DEPDC1B-203ENST00000505017 TUBA3CQ13748 450 aa6.81□□□□□ -1.32
DEPDC1B-203ENST00000505017 EPHA7Q15375 998 aa6.81□□□□□ -1.32
DEPDC1B-203ENST00000505017 TTC38Q5R3I4 469 aa6.81□□□□□ -1.32
DEPDC1B-203ENST00000505017 CDCA2Q69YH5 1023 aaPredicted RBP6.81□□□□□ -1.32
DEPDC1B-203ENST00000505017 TUBA3EQ6PEY2 450 aa6.81□□□□□ -1.32
DEPDC1B-203ENST00000505017 PCSK4Q6UW60 755 aa6.81□□□□□ -1.32
DEPDC1B-203ENST00000505017 ZNF627Q7L945 461 aa6.81□□□□□ -1.32
DEPDC1B-203ENST00000505017 AMER2Q8N7J2 671 aa6.81□□□□□ -1.32
DEPDC1B-203ENST00000505017 LPPQ93052 612 aa6.81□□□□□ -1.32
DEPDC1B-203ENST00000505017 SOX7Q9BT81 388 aa6.81□□□□□ -1.32
DEPDC1B-203ENST00000505017 DNAI1Q9UI46 699 aa6.81□□□□□ -1.32
DEPDC1B-203ENST00000505017 GIT1Q9Y2X7 761 aa6.81□□□□□ -1.32
DEPDC1B-203ENST00000505017 POGZQ7Z3K3 1410 aa6.81□□□□□ -1.32
DEPDC1B-203ENST00000505017 TEX14Q8IWB6 1497 aa6.8□□□□□ -1.32
DEPDC1B-203ENST00000505017 MLH3Q9UHC1 1453 aa6.8□□□□□ -1.32
DEPDC1B-203ENST00000505017 H2AFYO75367 372 aaKnown RBP6.8□□□□□ -1.32
DEPDC1B-203ENST00000505017 APPP05067 770 aa6.8□□□□□ -1.32
DEPDC1B-203ENST00000505017 CYP17A1P05093 508 aa6.8□□□□□ -1.32
DEPDC1B-203ENST00000505017 PABPC4Q13310 644 aaKnown RBP eCLIP6.8□□□□□ -1.32
DEPDC1B-203ENST00000505017 PRAMEF9Q5VWM5 478 aa6.8□□□□□ -1.32
DEPDC1B-203ENST00000505017 C1QL3Q5VWW1 255 aa6.8□□□□□ -1.32
DEPDC1B-203ENST00000505017 LDLRAD3Q86YD5 345 aa6.8□□□□□ -1.32
DEPDC1B-203ENST00000505017 GFM2Q969S9 779 aaKnown RBP6.8□□□□□ -1.32
DEPDC1B-203ENST00000505017 CHFRQ96EP1 664 aa6.8□□□□□ -1.32
DEPDC1B-203ENST00000505017 DYDC2Q96IM9 177 aa6.8□□□□□ -1.32
DEPDC1B-203ENST00000505017 PITHD1Q9GZP4 211 aaPredicted RBP6.8□□□□□ -1.32
DEPDC1B-203ENST00000505017 PCIF1Q9H4Z3 704 aa6.8□□□□□ -1.32
DEPDC1B-203ENST00000505017 SLC2A4RGQ9NR83 387 aa6.8□□□□□ -1.32
DEPDC1B-203ENST00000505017 TMEM260Q9NX78 707 aa6.8□□□□□ -1.32
DEPDC1B-203ENST00000505017 IQGAP3Q86VI3 1631 aa6.79□□□□□ -1.32
DEPDC1B-203ENST00000505017 DENND4BO75064 1496 aaPredicted RBP6.79□□□□□ -1.32
DEPDC1B-203ENST00000505017 HECW2Q9P2P5 1572 aa6.79□□□□□ -1.32
DEPDC1B-203ENST00000505017 UBE2QL1A1L167 161 aa6.79□□□□□ -1.32
DEPDC1B-203ENST00000505017 H7C1D1 291 aa6.79□□□□□ -1.32
DEPDC1B-203ENST00000505017 TOX4O94842 621 aa6.79□□□□□ -1.32
DEPDC1B-203ENST00000505017 ATP2A2P16615 1042 aaKnown RBP6.79□□□□□ -1.32
DEPDC1B-203ENST00000505017 KRT4P19013 534 aa6.79□□□□□ -1.32
DEPDC1B-203ENST00000505017 RABGGTBP53611 331 aa6.79□□□□□ -1.32
DEPDC1B-203ENST00000505017 SESN2P58004 480 aaPredicted RBP6.79□□□□□ -1.32
DEPDC1B-203ENST00000505017 HHEXQ03014 270 aa6.79□□□□□ -1.32
DEPDC1B-203ENST00000505017 BMP8AQ7Z5Y6 402 aa6.79□□□□□ -1.32
DEPDC1B-203ENST00000505017 THEMISQ8N1K5 641 aaPredicted RBP6.79□□□□□ -1.32
DEPDC1B-203ENST00000505017 SREK1Q8WXA9 508 aaKnown RBP6.79□□□□□ -1.32
DEPDC1B-203ENST00000505017 GCDHQ92947 438 aaPredicted RBP6.79□□□□□ -1.32
DEPDC1B-203ENST00000505017 E2F7Q96AV8 911 aa6.79□□□□□ -1.32
DEPDC1B-203ENST00000505017 WDR92Q96MX6 357 aa6.79□□□□□ -1.32
DEPDC1B-203ENST00000505017 TUBGCP5Q96RT8 1024 aa6.79□□□□□ -1.32
DEPDC1B-203ENST00000505017 MTFR1LQ9H019 292 aa6.79□□□□□ -1.32
DEPDC1B-203ENST00000505017 PIF1Q9H611 641 aa6.79□□□□□ -1.32
DEPDC1B-203ENST00000505017 ZMAT4Q9H898 229 aa6.79□□□□□ -1.32
DEPDC1B-203ENST00000505017 OXSMQ9NWU1 459 aa6.79□□□□□ -1.32
DEPDC1B-203ENST00000505017 KIDINS220Q9ULH0 1771 aa6.79□□□□□ -1.32
DEPDC1B-203ENST00000505017 NUP155O75694 1391 aa6.79□□□□□ -1.32
DEPDC1B-203ENST00000505017 ANKRD30BQ9BXX2 1392 aa6.79□□□□□ -1.32
DEPDC1B-203ENST00000505017 DEPDC5O75140 1603 aa6.79□□□□□ -1.32
DEPDC1B-203ENST00000505017 BCORL1Q5H9F3 1711 aa6.79□□□□□ -1.32
DEPDC1B-203ENST00000505017 RFPL3O75679 317 aa6.78□□□□□ -1.32
DEPDC1B-203ENST00000505017 ASMTLO95671 621 aa6.78□□□□□ -1.32
DEPDC1B-203ENST00000505017 TGFB2P61812 414 aa6.78□□□□□ -1.32
DEPDC1B-203ENST00000505017 DPTQ07507 201 aa6.78□□□□□ -1.32
DEPDC1B-203ENST00000505017 NFE2L2Q16236 605 aa6.78□□□□□ -1.32
DEPDC1B-203ENST00000505017 FAM111BQ6SJ93 734 aa6.78□□□□□ -1.32
DEPDC1B-203ENST00000505017 PLA2G15Q8NCC3 412 aa6.78□□□□□ -1.32
DEPDC1B-203ENST00000505017 NEU4Q8WWR8 484 aaPredicted RBP6.78□□□□□ -1.32
DEPDC1B-203ENST00000505017 RTF1Q92541 710 aaKnown RBP6.78□□□□□ -1.32
DEPDC1B-203ENST00000505017 ORAI3Q9BRQ5 295 aa6.78□□□□□ -1.32
DEPDC1B-203ENST00000505017 MYL10Q9BUA6 226 aa6.78□□□□□ -1.32
DEPDC1B-203ENST00000505017 POFUT1Q9H488 388 aa6.78□□□□□ -1.32
DEPDC1B-203ENST00000505017 CABP5Q9NP86 173 aa6.78□□□□□ -1.32
DEPDC1B-203ENST00000505017 IL23AQ9NPF7 189 aa6.78□□□□□ -1.32
DEPDC1B-203ENST00000505017 POLR3BQ9NW08 1133 aaPredicted RBP6.78□□□□□ -1.32
DEPDC1B-203ENST00000505017 AURKAIP1Q9NWT8 199 aaPredicted RBP6.78□□□□□ -1.32
DEPDC1B-203ENST00000505017 GPRC5BQ9NZH0 403 aa6.78□□□□□ -1.32
DEPDC1B-203ENST00000505017 SPO11Q9Y5K1 396 aa6.78□□□□□ -1.32
DEPDC1B-203ENST00000505017 DHX29Q7Z478 1369 aaKnown RBP6.78□□□□□ -1.32
DEPDC1B-203ENST00000505017 TONSLQ96HA7 1378 aa6.78□□□□□ -1.32
DEPDC1B-203ENST00000505017 RICTORQ6R327 1708 aa6.78□□□□□ -1.32
DEPDC1B-203ENST00000505017 RPRD2Q5VT52 1461 aaKnown RBP6.78□□□□□ -1.32
DEPDC1B-203ENST00000505017 ZMYM4Q5VZL5 1548 aa6.77□□□□□ -1.33
DEPDC1B-203ENST00000505017 FAM135AQ9P2D6 1515 aa6.77□□□□□ -1.33
DEPDC1B-203ENST00000505017 A0A0A6YYJ9 748 aa6.77□□□□□ -1.33
DEPDC1B-203ENST00000505017 KLRG2A4D1S0 409 aaPredicted RBP6.77□□□□□ -1.33
DEPDC1B-203ENST00000505017 STC2O76061 302 aa6.77□□□□□ -1.33
DEPDC1B-203ENST00000505017 MCM7P33993 719 aa6.77□□□□□ -1.33
DEPDC1B-203ENST00000505017 TOB2Q14106 344 aaPredicted RBP6.77□□□□□ -1.33
DEPDC1B-203ENST00000505017 AFAP1Q8N556 730 aa6.77□□□□□ -1.33
DEPDC1B-203ENST00000505017 MIEF2Q96C03 454 aa6.77□□□□□ -1.33
DEPDC1B-203ENST00000505017 MTG2Q9H4K7 406 aa6.77□□□□□ -1.33
DEPDC1B-203ENST00000505017 ZSWIM4Q9H7M6 989 aa6.77□□□□□ -1.33
DEPDC1B-203ENST00000505017 KIF13AQ9H1H9 1805 aa6.76□□□□□ -1.33
DEPDC1B-203ENST00000505017 ELL2O00472 640 aaPredicted RBP6.76□□□□□ -1.33
DEPDC1B-203ENST00000505017 PRPF6O94906 941 aaKnown RBP6.76□□□□□ -1.33
DEPDC1B-203ENST00000505017 VSIG10L2P0DP72 767 aa6.76□□□□□ -1.33
DEPDC1B-203ENST00000505017 ZNF174Q15697 407 aa6.76□□□□□ -1.33
DEPDC1B-203ENST00000505017 ELAVL1Q15717 326 aaKnown RBP6.76□□□□□ -1.33
DEPDC1B-203ENST00000505017 C21orf62-AS1Q17RA5 79 aa6.76□□□□□ -1.33
DEPDC1B-203ENST00000505017 TKFCQ3LXA3 575 aa6.76□□□□□ -1.33
DEPDC1B-203ENST00000505017 CCDC144BQ3MJ40 725 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms