RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 RALGAPA2Q2PPJ7 1873 aa13.13□□□□□ -0.31
PDLIM5-208ENST00000504489 FRMD3A2A2Y4 597 aa13.13□□□□□ -0.31
PDLIM5-208ENST00000504489 CCDC169A6NNP5 214 aa13.13□□□□□ -0.31
PDLIM5-208ENST00000504489 INO80B-WBP1J3KQ70 363 aa13.13□□□□□ -0.31
PDLIM5-208ENST00000504489 ENPP3O14638 875 aa13.13□□□□□ -0.31
PDLIM5-208ENST00000504489 GADD45BO75293 160 aaPredicted RBP13.13□□□□□ -0.31
PDLIM5-208ENST00000504489 GAP43P17677 238 aa13.13□□□□□ -0.31
PDLIM5-208ENST00000504489 SCP2P22307 547 aa13.13□□□□□ -0.31
PDLIM5-208ENST00000504489 FGFR4P22455 802 aa13.13□□□□□ -0.31
PDLIM5-208ENST00000504489 AXLP30530 894 aa13.13□□□□□ -0.31
PDLIM5-208ENST00000504489 SMTNP53814 917 aa13.13□□□□□ -0.31
PDLIM5-208ENST00000504489 UBE2HP62256 183 aa13.13□□□□□ -0.31
PDLIM5-208ENST00000504489 FAM160A1Q05DH4 1040 aa13.13□□□□□ -0.31
PDLIM5-208ENST00000504489 SNW1Q13573 536 aaKnown RBP13.13□□□□□ -0.31
PDLIM5-208ENST00000504489 DSC3Q14574 896 aa13.13□□□□□ -0.31
PDLIM5-208ENST00000504489 FAM187BQ17R55 369 aa13.13□□□□□ -0.31
PDLIM5-208ENST00000504489 KRBA2Q6ZNG9 492 aa13.13□□□□□ -0.31
PDLIM5-208ENST00000504489 CATSPER4Q7RTX7 472 aa13.13□□□□□ -0.31
PDLIM5-208ENST00000504489 RTN4RL1Q86UN2 441 aaPredicted RBP13.13□□□□□ -0.31
PDLIM5-208ENST00000504489 MYCT1Q8N699 235 aa13.13□□□□□ -0.31
PDLIM5-208ENST00000504489 PAGE5Q96GU1 130 aa13.13□□□□□ -0.31
PDLIM5-208ENST00000504489 RNPC3Q96LT9 517 aaKnown RBP13.13□□□□□ -0.31
PDLIM5-208ENST00000504489 CCDC113Q9H0I3 377 aa13.13□□□□□ -0.31
PDLIM5-208ENST00000504489 FZD8Q9H461 694 aa13.13□□□□□ -0.31
PDLIM5-208ENST00000504489 TMEM134Q9H6X4 195 aa13.13□□□□□ -0.31
PDLIM5-208ENST00000504489 KMT5AQ9NQR1 393 aa13.13□□□□□ -0.31
PDLIM5-208ENST00000504489 AGPAT5Q9NUQ2 364 aa13.13□□□□□ -0.31
PDLIM5-208ENST00000504489 PRMT7Q9NVM4 692 aaPredicted RBP13.13□□□□□ -0.31
PDLIM5-208ENST00000504489 CXXC1Q9P0U4 656 aaPredicted RBP13.13□□□□□ -0.31
PDLIM5-208ENST00000504489 ARHGAP28Q9P2N2 729 aa13.13□□□□□ -0.31
PDLIM5-208ENST00000504489 PHLPP2Q6ZVD8 1323 aa13.13□□□□□ -0.31
PDLIM5-208ENST00000504489 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.12□□□□□ -0.31
PDLIM5-208ENST00000504489 H0YCG3 227 aa13.12□□□□□ -0.31
PDLIM5-208ENST00000504489 RBAK-RBAKDNI3L0D1 243 aa13.12□□□□□ -0.31
PDLIM5-208ENST00000504489 K7ERI5 159 aa13.12□□□□□ -0.31
PDLIM5-208ENST00000504489 SLC16A4O15374 487 aa13.12□□□□□ -0.31
PDLIM5-208ENST00000504489 PRPF40AO75400 957 aaKnown RBP13.12□□□□□ -0.31
PDLIM5-208ENST00000504489 ERLIN2O94905 339 aa13.12□□□□□ -0.31
PDLIM5-208ENST00000504489 MYL1P05976 194 aa13.12□□□□□ -0.31
PDLIM5-208ENST00000504489 MAPTP10636 758 aaKnown RBP13.12□□□□□ -0.31
PDLIM5-208ENST00000504489 AFMP43652 599 aa13.12□□□□□ -0.31
PDLIM5-208ENST00000504489 NCKAP1LP55160 1127 aa13.12□□□□□ -0.31
PDLIM5-208ENST00000504489 WDR5P61964 334 aaKnown RBP13.12□□□□□ -0.31
PDLIM5-208ENST00000504489 MAPK6Q16659 721 aa13.12□□□□□ -0.31
PDLIM5-208ENST00000504489 AMHR2Q16671 573 aa13.12□□□□□ -0.31
PDLIM5-208ENST00000504489 KANK3Q6NY19 840 aa13.12□□□□□ -0.31
PDLIM5-208ENST00000504489 CCDC65Q8IXS2 484 aa13.12□□□□□ -0.31
PDLIM5-208ENST00000504489 SLC17A8Q8NDX2 589 aa13.12□□□□□ -0.31
PDLIM5-208ENST00000504489 TMEM161BQ8NDZ6 487 aa13.12□□□□□ -0.31
PDLIM5-208ENST00000504489 CNNM3Q8NE01 707 aa13.12□□□□□ -0.31
PDLIM5-208ENST00000504489 PHOSPHO2Q8TCD6 241 aa13.12□□□□□ -0.31
PDLIM5-208ENST00000504489 LINC01599Q8WXQ3 324 aa13.12□□□□□ -0.31
PDLIM5-208ENST00000504489 PRIMPOLQ96LW4 560 aa13.12□□□□□ -0.31
PDLIM5-208ENST00000504489 TIGD1Q96MW7 591 aa13.12□□□□□ -0.31
PDLIM5-208ENST00000504489 ADAM2Q99965 735 aa13.12□□□□□ -0.31
PDLIM5-208ENST00000504489 KIFC3Q9BVG8 833 aa13.12□□□□□ -0.31
PDLIM5-208ENST00000504489 ZHX3Q9H4I2 956 aa13.12□□□□□ -0.31
PDLIM5-208ENST00000504489 RGS18Q9NS28 235 aa13.12□□□□□ -0.31
PDLIM5-208ENST00000504489 PANK4Q9NVE7 773 aa13.12□□□□□ -0.31
PDLIM5-208ENST00000504489 SLC4A7Q9Y6M7 1214 aa13.12□□□□□ -0.31
PDLIM5-208ENST00000504489 LAMA2P24043 3122 aaKnown RBP13.11□□□□□ -0.31
PDLIM5-208ENST00000504489 PVALEFA0A1B0GWK0 134 aa13.11□□□□□ -0.31
PDLIM5-208ENST00000504489 ZBBXA8MT70 800 aa13.11□□□□□ -0.31
PDLIM5-208ENST00000504489 ACKR2O00590 384 aa13.11□□□□□ -0.31
PDLIM5-208ENST00000504489 GTPBP6O43824 516 aaPredicted RBP13.11□□□□□ -0.31
PDLIM5-208ENST00000504489 TRAK2O60296 914 aa13.11□□□□□ -0.31
PDLIM5-208ENST00000504489 MGEA5O60502 916 aa13.11□□□□□ -0.31
PDLIM5-208ENST00000504489 TSPAN1O60635 241 aa13.11□□□□□ -0.31
PDLIM5-208ENST00000504489 IDEP14735 1019 aa13.11□□□□□ -0.31
PDLIM5-208ENST00000504489 ZSCAN20P17040 1043 aaPredicted RBP13.11□□□□□ -0.31
PDLIM5-208ENST00000504489 LIG1P18858 919 aa13.11□□□□□ -0.31
PDLIM5-208ENST00000504489 HOXA11P31270 313 aaPredicted RBP13.11□□□□□ -0.31
PDLIM5-208ENST00000504489 ABCD1P33897 745 aa13.11□□□□□ -0.31
PDLIM5-208ENST00000504489 KCNJ6P48051 423 aa13.11□□□□□ -0.31
PDLIM5-208ENST00000504489 ASIC1P78348 528 aa13.11□□□□□ -0.31
PDLIM5-208ENST00000504489 FAM189BP81408 668 aa13.11□□□□□ -0.31
PDLIM5-208ENST00000504489 NCBP1Q09161 790 aaKnown RBP13.11□□□□□ -0.31
PDLIM5-208ENST00000504489 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.11□□□□□ -0.31
PDLIM5-208ENST00000504489 HAUS6Q7Z4H7 955 aa13.11□□□□□ -0.31
PDLIM5-208ENST00000504489 FAM178BQ8IXR5 827 aa13.11□□□□□ -0.31
PDLIM5-208ENST00000504489 GRAMD1CQ8IYS0 662 aa13.11□□□□□ -0.31
PDLIM5-208ENST00000504489 CCDC34Q96HJ3 373 aa13.11□□□□□ -0.31
PDLIM5-208ENST00000504489 FIZ1Q96SL8 496 aa13.11□□□□□ -0.31
PDLIM5-208ENST00000504489 SLC9A7Q96T83 725 aa13.11□□□□□ -0.31
PDLIM5-208ENST00000504489 TRAIPQ9BWF2 469 aa13.11□□□□□ -0.31
PDLIM5-208ENST00000504489 ST6GALNAC4Q9H4F1 302 aa13.11□□□□□ -0.31
PDLIM5-208ENST00000504489 OLFML3Q9NRN5 406 aa13.11□□□□□ -0.31
PDLIM5-208ENST00000504489 C1orf112Q9NSG2 853 aa13.11□□□□□ -0.31
PDLIM5-208ENST00000504489 DACT1Q9NYF0 836 aa13.11□□□□□ -0.31
PDLIM5-208ENST00000504489 DENND3A2RUS2 1198 aa13.1□□□□□ -0.31
PDLIM5-208ENST00000504489 C9IYK1 514 aa13.1□□□□□ -0.31
PDLIM5-208ENST00000504489 NR1I2O75469 434 aa13.1□□□□□ -0.31
PDLIM5-208ENST00000504489 AMHP03971 560 aa13.1□□□□□ -0.31
PDLIM5-208ENST00000504489 PRKCBP05771 671 aa13.1□□□□□ -0.31
PDLIM5-208ENST00000504489 ARF4P18085 180 aaPredicted RBP13.1□□□□□ -0.31
PDLIM5-208ENST00000504489 DEFB103AP81534 67 aa13.1□□□□□ -0.31
PDLIM5-208ENST00000504489 COASYQ13057 564 aa13.1□□□□□ -0.31
PDLIM5-208ENST00000504489 CUL4BQ13620 913 aa13.1□□□□□ -0.31
PDLIM5-208ENST00000504489 HERC4Q5GLZ8 1057 aaPredicted RBP13.1□□□□□ -0.31
PDLIM5-208ENST00000504489 UNC13DQ70J99 1090 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms