RNA–Protein interactions for RNA: ENST00000504386.1

SKP2-203, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5

Gene SKP2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-203ENST00000504386 MAEAQ7L5Y9 396 aa8.6□□□□□ -1.03
SKP2-203ENST00000504386 RTN4RL1Q86UN2 441 aaPredicted RBP8.6□□□□□ -1.03
SKP2-203ENST00000504386 KSR1Q8IVT5 923 aa8.6□□□□□ -1.03
SKP2-203ENST00000504386 TMEM192Q8IY95 271 aa8.6□□□□□ -1.03
SKP2-203ENST00000504386 IQUBQ8NA54 791 aa8.6□□□□□ -1.03
SKP2-203ENST00000504386 RNF169Q8NCN4 708 aa8.6□□□□□ -1.03
SKP2-203ENST00000504386 ASAP3Q8TDY4 903 aa8.6□□□□□ -1.03
SKP2-203ENST00000504386 SPIRE2Q8WWL2 714 aa8.6□□□□□ -1.03
SKP2-203ENST00000504386 LINC01599Q8WXQ3 324 aa8.6□□□□□ -1.03
SKP2-203ENST00000504386 RAD54LQ92698 747 aa8.6□□□□□ -1.03
SKP2-203ENST00000504386 USP28Q96RU2 1077 aa8.6□□□□□ -1.03
SKP2-203ENST00000504386 MMTAG2Q9BU76 263 aaKnown RBP8.6□□□□□ -1.03
SKP2-203ENST00000504386 CSRNP2Q9H175 543 aa8.6□□□□□ -1.03
SKP2-203ENST00000504386 PRDM12Q9H4Q4 367 aa8.6□□□□□ -1.03
SKP2-203ENST00000504386 TMEM134Q9H6X4 195 aa8.6□□□□□ -1.03
SKP2-203ENST00000504386 RC3H2Q9HBD1 1191 aaKnown RBP8.6□□□□□ -1.03
SKP2-203ENST00000504386 PARVGQ9HBI0 331 aa8.6□□□□□ -1.03
SKP2-203ENST00000504386 KMT5AQ9NQR1 393 aa8.6□□□□□ -1.03
SKP2-203ENST00000504386 SEL1LQ9UBV2 794 aa8.6□□□□□ -1.03
SKP2-203ENST00000504386 PUF60Q9UHX1 559 aaKnown RBP8.6□□□□□ -1.03
SKP2-203ENST00000504386 FBXO2Q9UK22 296 aaPredicted RBP8.6□□□□□ -1.03
SKP2-203ENST00000504386 FARP1Q9Y4F1 1045 aaPredicted RBP8.6□□□□□ -1.03
SKP2-203ENST00000504386 A0A1B0GUA9 196 aa8.59□□□□□ -1.03
SKP2-203ENST00000504386 H3BNC9 293 aa8.59□□□□□ -1.03
SKP2-203ENST00000504386 ACKR2O00590 384 aa8.59□□□□□ -1.03
SKP2-203ENST00000504386 MGEA5O60502 916 aa8.59□□□□□ -1.03
SKP2-203ENST00000504386 TSPAN1O60635 241 aa8.59□□□□□ -1.03
SKP2-203ENST00000504386 HIP1RO75146 1068 aa8.59□□□□□ -1.03
SKP2-203ENST00000504386 BRD1O95696 1058 aa8.59□□□□□ -1.03
SKP2-203ENST00000504386 PRKCBP05771 671 aa8.59□□□□□ -1.03
SKP2-203ENST00000504386 ITGA4P13612 1032 aa8.59□□□□□ -1.03
SKP2-203ENST00000504386 MYOGP15173 224 aa8.59□□□□□ -1.03
SKP2-203ENST00000504386 GAP43P17677 238 aa8.59□□□□□ -1.03
SKP2-203ENST00000504386 PLCG1P19174 1290 aa8.59□□□□□ -1.03
SKP2-203ENST00000504386 NCLP19338 710 aaKnown RBP8.59□□□□□ -1.03
SKP2-203ENST00000504386 CDC25AP30304 524 aa8.59□□□□□ -1.03
SKP2-203ENST00000504386 ALDH7A1P49419 539 aaKnown RBP8.59□□□□□ -1.03
SKP2-203ENST00000504386 RNASELQ05823 741 aaKnown RBP8.59□□□□□ -1.03
SKP2-203ENST00000504386 GRB10Q13322 594 aa8.59□□□□□ -1.03
SKP2-203ENST00000504386 ALCAMQ13740 583 aa8.59□□□□□ -1.03
SKP2-203ENST00000504386 AAK1Q2M2I8 961 aa8.59□□□□□ -1.03
SKP2-203ENST00000504386 EPC2Q52LR7 807 aa8.59□□□□□ -1.03
SKP2-203ENST00000504386 GPBP1Q86WP2 473 aa8.59□□□□□ -1.03
SKP2-203ENST00000504386 CRIPAKQ8N1N5 446 aa8.59□□□□□ -1.03
SKP2-203ENST00000504386 MAFAQ8NHW3 353 aaPredicted RBP8.59□□□□□ -1.03
SKP2-203ENST00000504386 MYLIPQ8WY64 445 aa8.59□□□□□ -1.03
SKP2-203ENST00000504386 SYMPKQ92797 1274 aaKnown RBP8.59□□□□□ -1.03
SKP2-203ENST00000504386 KCNN1Q92952 543 aa8.59□□□□□ -1.03
SKP2-203ENST00000504386 MRPL38Q96DV4 380 aaKnown RBP8.59□□□□□ -1.03
SKP2-203ENST00000504386 ZNF668Q96K58 619 aaPredicted RBP8.59□□□□□ -1.03
SKP2-203ENST00000504386 ZNF558Q96NG5 402 aa8.59□□□□□ -1.03
SKP2-203ENST00000504386 GUCD1Q96NT3 240 aa8.59□□□□□ -1.03
SKP2-203ENST00000504386 FAM193BQ96PV7 902 aaPredicted RBP8.59□□□□□ -1.03
SKP2-203ENST00000504386 NTPCRQ9BSD7 190 aaKnown RBP8.59□□□□□ -1.03
SKP2-203ENST00000504386 MRPL4Q9BYD3 311 aaKnown RBP8.59□□□□□ -1.03
SKP2-203ENST00000504386 FZD8Q9H461 694 aa8.59□□□□□ -1.03
SKP2-203ENST00000504386 RSAD1Q9HA92 442 aa8.59□□□□□ -1.03
SKP2-203ENST00000504386 TOPORSQ9NS56 1045 aaPredicted RBP8.59□□□□□ -1.03
SKP2-203ENST00000504386 USP25Q9UHP3 1055 aa8.59□□□□□ -1.03
SKP2-203ENST00000504386 LZTS1Q9Y250 596 aa8.59□□□□□ -1.03
SKP2-203ENST00000504386 GIT1Q9Y2X7 761 aa8.59□□□□□ -1.03
SKP2-203ENST00000504386 PCDHB2Q9Y5E7 798 aa8.59□□□□□ -1.03
SKP2-203ENST00000504386 LPXNO60711 386 aa8.58□□□□□ -1.04
SKP2-203ENST00000504386 SRGAP2BP0DMP2 458 aa8.58□□□□□ -1.04
SKP2-203ENST00000504386 MAPTP10636 758 aaKnown RBP8.58□□□□□ -1.04
SKP2-203ENST00000504386 ARF4P18085 180 aaPredicted RBP8.58□□□□□ -1.04
SKP2-203ENST00000504386 IBSPP21815 317 aaPredicted RBP8.58□□□□□ -1.04
SKP2-203ENST00000504386 FGFR4P22455 802 aa8.58□□□□□ -1.04
SKP2-203ENST00000504386 NPTX2P47972 431 aa8.58□□□□□ -1.04
SKP2-203ENST00000504386 YARSP54577 528 aaKnown RBP8.58□□□□□ -1.04
SKP2-203ENST00000504386 SLC12A3P55017 1021 aa8.58□□□□□ -1.04
SKP2-203ENST00000504386 PEX3P56589 373 aa8.58□□□□□ -1.04
SKP2-203ENST00000504386 GPM6BQ13491 265 aa8.58□□□□□ -1.04
SKP2-203ENST00000504386 KARSQ15046 597 aaKnown RBP8.58□□□□□ -1.04
SKP2-203ENST00000504386 ECM1Q16610 540 aa8.58□□□□□ -1.04
SKP2-203ENST00000504386 NOMO2Q5JPE7 1267 aa8.58□□□□□ -1.04
SKP2-203ENST00000504386 TMCO2Q7Z6W1 182 aaPredicted RBP8.58□□□□□ -1.04
SKP2-203ENST00000504386 MRPL10Q7Z7H8 261 aaKnown RBP8.58□□□□□ -1.04
SKP2-203ENST00000504386 ZNF598Q86UK7 904 aaKnown RBP8.58□□□□□ -1.04
SKP2-203ENST00000504386 THNSL1Q8IYQ7 743 aa8.58□□□□□ -1.04
SKP2-203ENST00000504386 SPRYD3Q8NCJ5 442 aa8.58□□□□□ -1.04
SKP2-203ENST00000504386 HVCN1Q96D96 273 aa8.58□□□□□ -1.04
SKP2-203ENST00000504386 SPATA32Q96LK8 384 aa8.58□□□□□ -1.04
SKP2-203ENST00000504386 PNMA5Q96PV4 448 aa8.58□□□□□ -1.04
SKP2-203ENST00000504386 RPS6KC1Q96S38 1066 aa8.58□□□□□ -1.04
SKP2-203ENST00000504386 RUSC1Q9BVN2 902 aa8.58□□□□□ -1.04
SKP2-203ENST00000504386 OSBPL7Q9BZF2 842 aa8.58□□□□□ -1.04
SKP2-203ENST00000504386 TNMDQ9H2S6 317 aa8.58□□□□□ -1.04
SKP2-203ENST00000504386 MINDY3Q9H8M7 445 aa8.58□□□□□ -1.04
SKP2-203ENST00000504386 GPRC5CQ9NQ84 441 aa8.58□□□□□ -1.04
SKP2-203ENST00000504386 ARHGAP28Q9P2N2 729 aa8.58□□□□□ -1.04
SKP2-203ENST00000504386 CIZ1Q9ULV3 898 aaPredicted RBP8.58□□□□□ -1.04
SKP2-203ENST00000504386 EXOC7Q9UPT5 735 aa8.58□□□□□ -1.04
SKP2-203ENST00000504386 LCHNA4D1U4 455 aa8.57□□□□□ -1.04
SKP2-203ENST00000504386 GOLGA6L4A6NEF3 574 aa8.57□□□□□ -1.04
SKP2-203ENST00000504386 INPPL1O15357 1258 aa8.57□□□□□ -1.04
SKP2-203ENST00000504386 CSDE1O75534 798 aaKnown RBP8.57□□□□□ -1.04
SKP2-203ENST00000504386 MYL1P05976 194 aa8.57□□□□□ -1.04
SKP2-203ENST00000504386 LIG1P18858 919 aa8.57□□□□□ -1.04
SKP2-203ENST00000504386 HOXA11P31270 313 aaPredicted RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms