RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 PORCNQ9H237 461 aa10.64□□□□□ -0.71
COL1A1-210ENST00000504289 TMEM134Q9H6X4 195 aa10.64□□□□□ -0.71
COL1A1-210ENST00000504289 TMEM8AQ9HCN3 771 aa10.64□□□□□ -0.71
COL1A1-210ENST00000504289 POLD4Q9HCU8 107 aa10.64□□□□□ -0.71
COL1A1-210ENST00000504289 XPNPEP1Q9NQW7 623 aa10.64□□□□□ -0.71
COL1A1-210ENST00000504289 SEPT9Q9UHD8 586 aaPredicted RBP10.64□□□□□ -0.71
COL1A1-210ENST00000504289 PUF60Q9UHX1 559 aaKnown RBP10.64□□□□□ -0.71
COL1A1-210ENST00000504289 CAPN6Q9Y6Q1 641 aa10.64□□□□□ -0.71
COL1A1-210ENST00000504289 LCTP09848 1927 aa10.64□□□□□ -0.71
COL1A1-210ENST00000504289 SCN4AP35499 1836 aa10.63□□□□□ -0.71
COL1A1-210ENST00000504289 EMSYQ7Z589 1322 aa10.63□□□□□ -0.71
COL1A1-210ENST00000504289 DNAJC25-GNG10A0A024R161 153 aa10.63□□□□□ -0.71
COL1A1-210ENST00000504289 SOWAHBA6NEL2 793 aa10.63□□□□□ -0.71
COL1A1-210ENST00000504289 ADM5C9JUS6 153 aa10.63□□□□□ -0.71
COL1A1-210ENST00000504289 ENC1O14682 589 aa10.63□□□□□ -0.71
COL1A1-210ENST00000504289 EVI5O60447 810 aa10.63□□□□□ -0.71
COL1A1-210ENST00000504289 LGR5O75473 907 aa10.63□□□□□ -0.71
COL1A1-210ENST00000504289 FARP2O94887 1054 aaPredicted RBP10.63□□□□□ -0.71
COL1A1-210ENST00000504289 CLSTN1O94985 981 aa10.63□□□□□ -0.71
COL1A1-210ENST00000504289 MOCS3O95396 460 aa10.63□□□□□ -0.71
COL1A1-210ENST00000504289 TMEM253P0C7T8 217 aa10.63□□□□□ -0.71
COL1A1-210ENST00000504289 ZSCAN20P17040 1043 aaPredicted RBP10.63□□□□□ -0.71
COL1A1-210ENST00000504289 ARL2P36404 184 aa10.63□□□□□ -0.71
COL1A1-210ENST00000504289 EFNA5P52803 228 aa10.63□□□□□ -0.71
COL1A1-210ENST00000504289 POLGP54098 1239 aaPredicted RBP10.63□□□□□ -0.71
COL1A1-210ENST00000504289 MFAP3P55082 362 aa10.63□□□□□ -0.71
COL1A1-210ENST00000504289 FKBP1BP68106 108 aa10.63□□□□□ -0.71
COL1A1-210ENST00000504289 CLDN10P78369 228 aa10.63□□□□□ -0.71
COL1A1-210ENST00000504289 STRN3Q13033 797 aa10.63□□□□□ -0.71
COL1A1-210ENST00000504289 SNAPC2Q13487 334 aa10.63□□□□□ -0.71
COL1A1-210ENST00000504289 KCTD2Q14681 263 aa10.63□□□□□ -0.71
COL1A1-210ENST00000504289 EMC2Q15006 297 aa10.63□□□□□ -0.71
COL1A1-210ENST00000504289 TARBP2Q15633 366 aaKnown RBP10.63□□□□□ -0.71
COL1A1-210ENST00000504289 CFAP221Q4G0U5 840 aa10.63□□□□□ -0.71
COL1A1-210ENST00000504289 MEI1Q5TIA1 1274 aa10.63□□□□□ -0.71
COL1A1-210ENST00000504289 CYFIP1Q7L576 1253 aa10.63□□□□□ -0.71
COL1A1-210ENST00000504289 MAEAQ7L5Y9 396 aa10.63□□□□□ -0.71
COL1A1-210ENST00000504289 PLPPR4Q7Z2D5 763 aa10.63□□□□□ -0.71
COL1A1-210ENST00000504289 NCAPG2Q86XI2 1143 aa10.63□□□□□ -0.71
COL1A1-210ENST00000504289 CREG2Q8IUH2 290 aa10.63□□□□□ -0.71
COL1A1-210ENST00000504289 KSR1Q8IVT5 923 aa10.63□□□□□ -0.71
COL1A1-210ENST00000504289 GPD1LQ8N335 351 aa10.63□□□□□ -0.71
COL1A1-210ENST00000504289 CAGE1Q8TC20 777 aa10.63□□□□□ -0.71
COL1A1-210ENST00000504289 OTUD5Q96G74 571 aa10.63□□□□□ -0.71
COL1A1-210ENST00000504289 PBKQ96KB5 322 aa10.63□□□□□ -0.71
COL1A1-210ENST00000504289 OSBPL9Q96SU4 736 aa10.63□□□□□ -0.71
COL1A1-210ENST00000504289 CBWD1Q9BRT8 395 aa10.63□□□□□ -0.71
COL1A1-210ENST00000504289 TLR10Q9BXR5 811 aa10.63□□□□□ -0.71
COL1A1-210ENST00000504289 ANKZF1Q9H8Y5 726 aa10.63□□□□□ -0.71
COL1A1-210ENST00000504289 ELP3Q9H9T3 547 aa10.63□□□□□ -0.71
COL1A1-210ENST00000504289 MLXIPQ9HAP2 919 aa10.63□□□□□ -0.71
COL1A1-210ENST00000504289 GPRC5CQ9NQ84 441 aa10.63□□□□□ -0.71
COL1A1-210ENST00000504289 FZD1Q9UP38 647 aa10.63□□□□□ -0.71
COL1A1-210ENST00000504289 DIS3Q9Y2L1 958 aaKnown RBP10.63□□□□□ -0.71
COL1A1-210ENST00000504289 NCANO14594 1321 aa10.62□□□□□ -0.71
COL1A1-210ENST00000504289 A0A0U1RQG5 324 aaPredicted RBP10.62□□□□□ -0.71
COL1A1-210ENST00000504289 GSTTP1A0A1W2PQM5 241 aa10.62□□□□□ -0.71
COL1A1-210ENST00000504289 GLTPD2A6NH11 291 aa10.62□□□□□ -0.71
COL1A1-210ENST00000504289 ZNF233A6NK53 670 aa10.62□□□□□ -0.71
COL1A1-210ENST00000504289 ASB14A6NK59 587 aa10.62□□□□□ -0.71
COL1A1-210ENST00000504289 DDX3XO00571 662 aaKnown RBP eCLIP10.62□□□□□ -0.71
COL1A1-210ENST00000504289 EXTL3O43909 919 aa10.62□□□□□ -0.71
COL1A1-210ENST00000504289 MAFO75444 373 aaPredicted RBP10.62□□□□□ -0.71
COL1A1-210ENST00000504289 CNMDO75829 334 aa10.62□□□□□ -0.71
COL1A1-210ENST00000504289 TRIM49P0CI25 452 aa10.62□□□□□ -0.71
COL1A1-210ENST00000504289 TRIM49CP0CI26 452 aa10.62□□□□□ -0.71
COL1A1-210ENST00000504289 GZMAP12544 262 aa10.62□□□□□ -0.71
COL1A1-210ENST00000504289 UBA1P22314 1058 aaKnown RBP10.62□□□□□ -0.71
COL1A1-210ENST00000504289 KLRC1P26715 233 aa10.62□□□□□ -0.71
COL1A1-210ENST00000504289 ADSSP30520 456 aa10.62□□□□□ -0.71
COL1A1-210ENST00000504289 STAT5BP51692 787 aa10.62□□□□□ -0.71
COL1A1-210ENST00000504289 AP3M2P53677 418 aa10.62□□□□□ -0.71
COL1A1-210ENST00000504289 CCNA1P78396 465 aa10.62□□□□□ -0.71
COL1A1-210ENST00000504289 SP2Q02086 613 aa10.62□□□□□ -0.71
COL1A1-210ENST00000504289 CNTN2Q02246 1040 aa10.62□□□□□ -0.71
COL1A1-210ENST00000504289 ARID5AQ03989 594 aa10.62□□□□□ -0.71
COL1A1-210ENST00000504289 CYP24A1Q07973 514 aa10.62□□□□□ -0.71
COL1A1-210ENST00000504289 PPP3CAQ08209 521 aa10.62□□□□□ -0.71
COL1A1-210ENST00000504289 MOGSQ13724 837 aa10.62□□□□□ -0.71
COL1A1-210ENST00000504289 PRKG1Q13976 671 aa10.62□□□□□ -0.71
COL1A1-210ENST00000504289 C1orf220Q5T0J3 134 aa10.62□□□□□ -0.71
COL1A1-210ENST00000504289 SLFN11Q7Z7L1 901 aa10.62□□□□□ -0.71
COL1A1-210ENST00000504289 ABRAQ8N0Z2 381 aa10.62□□□□□ -0.71
COL1A1-210ENST00000504289 TCP11Q8WWU5 503 aa10.62□□□□□ -0.71
COL1A1-210ENST00000504289 BBXQ8WY36 941 aaPredicted RBP10.62□□□□□ -0.71
COL1A1-210ENST00000504289 PKNOX2Q96KN3 472 aa10.62□□□□□ -0.71
COL1A1-210ENST00000504289 CEP89Q96ST8 783 aa10.62□□□□□ -0.71
COL1A1-210ENST00000504289 MMS19Q96T76 1030 aa10.62□□□□□ -0.71
COL1A1-210ENST00000504289 GPR88Q9GZN0 384 aa10.62□□□□□ -0.71
COL1A1-210ENST00000504289 TMEM117Q9H0C3 514 aa10.62□□□□□ -0.71
COL1A1-210ENST00000504289 POLR3FQ9H1D9 316 aaPredicted RBP10.62□□□□□ -0.71
COL1A1-210ENST00000504289 AZI2Q9H6S1 392 aa10.62□□□□□ -0.71
COL1A1-210ENST00000504289 ZNF446Q9NWS9 450 aa10.62□□□□□ -0.71
COL1A1-210ENST00000504289 RBPJLQ9UBG7 517 aa10.62□□□□□ -0.71
COL1A1-210ENST00000504289 HDAC6Q9UBN7 1215 aa10.62□□□□□ -0.71
COL1A1-210ENST00000504289 MYH10P35580 1976 aa10.62□□□□□ -0.71
COL1A1-210ENST00000504289 GOLGB1Q14789 3259 aaKnown RBP10.61□□□□□ -0.71
COL1A1-210ENST00000504289 ANKRD62A6NC57 917 aa10.61□□□□□ -0.71
COL1A1-210ENST00000504289 ANKRD63C9JTQ0 380 aa10.61□□□□□ -0.71
COL1A1-210ENST00000504289 TULP1O00294 542 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms