RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 DDX27Q96GQ7 796 aaKnown RBP10.38□□□□□ -0.75
PDLIM5-207ENST00000503974 NAP1L3Q99457 506 aaPredicted RBP10.38□□□□□ -0.75
PDLIM5-207ENST00000503974 EIF2AQ9BY44 585 aaKnown RBP10.38□□□□□ -0.75
PDLIM5-207ENST00000503974 SH3GLB2Q9NR46 395 aa10.38□□□□□ -0.75
PDLIM5-207ENST00000503974 AASDHPPTQ9NRN7 309 aa10.38□□□□□ -0.75
PDLIM5-207ENST00000503974 BARHL2Q9NY43 387 aa10.38□□□□□ -0.75
PDLIM5-207ENST00000503974 LNPEPQ9UIQ6 1025 aa10.38□□□□□ -0.75
PDLIM5-207ENST00000503974 CCPG1Q9ULG6 757 aa10.38□□□□□ -0.75
PDLIM5-207ENST00000503974 RIPK3Q9Y572 518 aa10.38□□□□□ -0.75
PDLIM5-207ENST00000503974 ZSWIM8A7E2V4 1837 aa10.38□□□□□ -0.75
PDLIM5-207ENST00000503974 LCTP09848 1927 aa10.38□□□□□ -0.75
PDLIM5-207ENST00000503974 ESYT2A0FGR8 921 aa10.38□□□□□ -0.75
PDLIM5-207ENST00000503974 DNM1LO00429 736 aa10.38□□□□□ -0.75
PDLIM5-207ENST00000503974 DIAPH2O60879 1101 aa10.38□□□□□ -0.75
PDLIM5-207ENST00000503974 FOSBP53539 338 aa10.38□□□□□ -0.75
PDLIM5-207ENST00000503974 CCNA1P78396 465 aa10.38□□□□□ -0.75
PDLIM5-207ENST00000503974 AKAP17AQ02040 695 aaKnown RBP10.38□□□□□ -0.75
PDLIM5-207ENST00000503974 LRP8Q14114 963 aa10.38□□□□□ -0.75
PDLIM5-207ENST00000503974 LACTB2Q53H82 288 aaPredicted RBP10.38□□□□□ -0.75
PDLIM5-207ENST00000503974 TYW1BQ6NUM6 668 aa10.38□□□□□ -0.75
PDLIM5-207ENST00000503974 CEP128Q6ZU80 1094 aa10.38□□□□□ -0.75
PDLIM5-207ENST00000503974 CLEC4DQ8WXI8 215 aa10.38□□□□□ -0.75
PDLIM5-207ENST00000503974 VMP1Q96GC9 406 aa10.38□□□□□ -0.75
PDLIM5-207ENST00000503974 CEP295NLQ96MC4 621 aa10.38□□□□□ -0.75
PDLIM5-207ENST00000503974 FAM167BQ9BTA0 163 aa10.38□□□□□ -0.75
PDLIM5-207ENST00000503974 PORCNQ9H237 461 aa10.38□□□□□ -0.75
PDLIM5-207ENST00000503974 MROH8Q9H579 483 aa10.38□□□□□ -0.75
PDLIM5-207ENST00000503974 BAIAP2L1Q9UHR4 511 aa10.38□□□□□ -0.75
PDLIM5-207ENST00000503974 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.37□□□□□ -0.75
PDLIM5-207ENST00000503974 GPR25O00155 361 aa10.37□□□□□ -0.75
PDLIM5-207ENST00000503974 USO1O60763 962 aaKnown RBP10.37□□□□□ -0.75
PDLIM5-207ENST00000503974 CUTAO60888 179 aa10.37□□□□□ -0.75
PDLIM5-207ENST00000503974 STAM2O75886 525 aa10.37□□□□□ -0.75
PDLIM5-207ENST00000503974 TAL1P17542 331 aaPredicted RBP10.37□□□□□ -0.75
PDLIM5-207ENST00000503974 KLC1Q07866 573 aa10.37□□□□□ -0.75
PDLIM5-207ENST00000503974 KIF5AQ12840 1032 aa10.37□□□□□ -0.75
PDLIM5-207ENST00000503974 SLC44A4Q53GD3 710 aa10.37□□□□□ -0.75
PDLIM5-207ENST00000503974 C11orf74Q86VG3 221 aa10.37□□□□□ -0.75
PDLIM5-207ENST00000503974 DCLK2Q8N568 766 aa10.37□□□□□ -0.75
PDLIM5-207ENST00000503974 WASF1Q92558 559 aa10.37□□□□□ -0.75
PDLIM5-207ENST00000503974 GPKOWQ92917 476 aaPredicted RBP eCLIP10.37□□□□□ -0.75
PDLIM5-207ENST00000503974 GSDMAQ96QA5 445 aa10.37□□□□□ -0.75
PDLIM5-207ENST00000503974 RNF146Q9NTX7 359 aa10.37□□□□□ -0.75
PDLIM5-207ENST00000503974 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.37□□□□□ -0.75
PDLIM5-207ENST00000503974 FBXO40Q9UH90 709 aa10.37□□□□□ -0.75
PDLIM5-207ENST00000503974 PCDHA1Q9Y5I3 950 aa10.37□□□□□ -0.75
PDLIM5-207ENST00000503974 TBCAO75347 108 aaKnown RBP10.37□□□□□ -0.75
PDLIM5-207ENST00000503974 ZSCAN22P10073 491 aaPredicted RBP10.37□□□□□ -0.75
PDLIM5-207ENST00000503974 MAPK4P31152 587 aa10.37□□□□□ -0.75
PDLIM5-207ENST00000503974 TUBP50607 506 aa10.37□□□□□ -0.75
PDLIM5-207ENST00000503974 NLRP5P59047 1200 aa10.37□□□□□ -0.75
PDLIM5-207ENST00000503974 PLS1Q14651 629 aa10.37□□□□□ -0.75
PDLIM5-207ENST00000503974 ANKRD20A8PQ5CZ79 823 aa10.37□□□□□ -0.75
PDLIM5-207ENST00000503974 ANO7Q6IWH7 933 aa10.37□□□□□ -0.75
PDLIM5-207ENST00000503974 WDR93Q6P2C0 686 aa10.37□□□□□ -0.75
PDLIM5-207ENST00000503974 FCHSD1Q86WN1 690 aa10.37□□□□□ -0.75
PDLIM5-207ENST00000503974 ARHGAP18Q8N392 663 aa10.37□□□□□ -0.75
PDLIM5-207ENST00000503974 ZNF473Q8WTR7 871 aaKnown RBP10.37□□□□□ -0.75
PDLIM5-207ENST00000503974 WDR60Q8WVS4 1066 aa10.37□□□□□ -0.75
PDLIM5-207ENST00000503974 PMM1Q92871 262 aa10.37□□□□□ -0.75
PDLIM5-207ENST00000503974 COA7Q96BR5 231 aa10.37□□□□□ -0.75
PDLIM5-207ENST00000503974 LRRC45Q96CN5 670 aa10.37□□□□□ -0.75
PDLIM5-207ENST00000503974 IFT43Q96FT9 208 aa10.37□□□□□ -0.75
PDLIM5-207ENST00000503974 FGD4Q96M96 766 aa10.37□□□□□ -0.75
PDLIM5-207ENST00000503974 CTAGE1Q96RT6 745 aa10.37□□□□□ -0.75
PDLIM5-207ENST00000503974 CGREF1Q99674 301 aa10.37□□□□□ -0.75
PDLIM5-207ENST00000503974 BEGAINQ9BUH8 593 aa10.37□□□□□ -0.75
PDLIM5-207ENST00000503974 ACAD9Q9H845 621 aa10.37□□□□□ -0.75
PDLIM5-207ENST00000503974 ZNF304Q9HCX3 659 aa10.37□□□□□ -0.75
PDLIM5-207ENST00000503974 SUCLA2Q9P2R7 463 aaPredicted RBP10.37□□□□□ -0.75
PDLIM5-207ENST00000503974 MRPL11Q9Y3B7 192 aaKnown RBP10.37□□□□□ -0.75
PDLIM5-207ENST00000503974 ANKRD62A6NC57 917 aa10.36□□□□□ -0.75
PDLIM5-207ENST00000503974 VWA3AA6NCI4 1184 aa10.36□□□□□ -0.75
PDLIM5-207ENST00000503974 AGPSO00116 658 aa10.36□□□□□ -0.75
PDLIM5-207ENST00000503974 FIBPO43427 364 aa10.36□□□□□ -0.75
PDLIM5-207ENST00000503974 ACTN4O43707 911 aaKnown RBP10.36□□□□□ -0.75
PDLIM5-207ENST00000503974 DTNBO60941 627 aa10.36□□□□□ -0.75
PDLIM5-207ENST00000503974 HSPA1AP0DMV8 641 aaKnown RBP10.36□□□□□ -0.75
PDLIM5-207ENST00000503974 HSPA1BP0DMV9 641 aaKnown RBP10.36□□□□□ -0.75
PDLIM5-207ENST00000503974 ALAS1P13196 640 aa10.36□□□□□ -0.75
PDLIM5-207ENST00000503974 GJB2P29033 226 aa10.36□□□□□ -0.75
PDLIM5-207ENST00000503974 CTGFP29279 349 aa10.36□□□□□ -0.75
PDLIM5-207ENST00000503974 GGCXP38435 758 aa10.36□□□□□ -0.75
PDLIM5-207ENST00000503974 CCT6AP40227 531 aaKnown RBP10.36□□□□□ -0.75
PDLIM5-207ENST00000503974 GEMIN4P57678 1058 aaKnown RBP10.36□□□□□ -0.75
PDLIM5-207ENST00000503974 LACTBP83111 547 aaPredicted RBP10.36□□□□□ -0.75
PDLIM5-207ENST00000503974 SP3Q02447 781 aa10.36□□□□□ -0.75
PDLIM5-207ENST00000503974 SH2D4BQ5SQS7 431 aa10.36□□□□□ -0.75
PDLIM5-207ENST00000503974 ATL3Q6DD88 541 aa10.36□□□□□ -0.75
PDLIM5-207ENST00000503974 HEATR3Q7Z4Q2 680 aa10.36□□□□□ -0.75
PDLIM5-207ENST00000503974 ABRAQ8N0Z2 381 aa10.36□□□□□ -0.75
PDLIM5-207ENST00000503974 CCDC148Q8NFR7 591 aa10.36□□□□□ -0.75
PDLIM5-207ENST00000503974 RIN2Q8WYP3 895 aaPredicted RBP10.36□□□□□ -0.75
PDLIM5-207ENST00000503974 DHX58Q96C10 678 aa10.36□□□□□ -0.75
PDLIM5-207ENST00000503974 AIFM3Q96NN9 605 aa10.36□□□□□ -0.75
PDLIM5-207ENST00000503974 WDR24Q96S15 920 aa10.36□□□□□ -0.75
PDLIM5-207ENST00000503974 SYT15Q9BQS2 421 aa10.36□□□□□ -0.75
PDLIM5-207ENST00000503974 ALG1Q9BT22 464 aa10.36□□□□□ -0.75
PDLIM5-207ENST00000503974 ZMYND12Q9H0C1 365 aa10.36□□□□□ -0.75
PDLIM5-207ENST00000503974 DNAJC25Q9H1X3 360 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms