RNA–Protein interactions for RNA: ENST00000503682.5

COPS4-202, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5 BASIC

Gene COPS4, Length 1,702 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-202ENST00000503682 HIDE1A8MVS5 230 aa11.32□□□□□ -0.6
COPS4-202ENST00000503682 B4GALT5O43286 388 aa11.32□□□□□ -0.6
COPS4-202ENST00000503682 HOXA2O43364 376 aa11.32□□□□□ -0.6
COPS4-202ENST00000503682 TSPAN1O60635 241 aa11.32□□□□□ -0.6
COPS4-202ENST00000503682 ZC3H11AO75152 810 aaKnown RBP eCLIP11.32□□□□□ -0.6
COPS4-202ENST00000503682 OFD1O75665 1012 aa11.32□□□□□ -0.6
COPS4-202ENST00000503682 DGAT1O75907 488 aa11.32□□□□□ -0.6
COPS4-202ENST00000503682 GLP2RO95838 553 aa11.32□□□□□ -0.6
COPS4-202ENST00000503682 CCT6AP40227 531 aaKnown RBP11.32□□□□□ -0.6
COPS4-202ENST00000503682 BCAR1P56945 870 aa11.32□□□□□ -0.6
COPS4-202ENST00000503682 MBTD1Q05BQ5 628 aa11.32□□□□□ -0.6
COPS4-202ENST00000503682 COL19A1Q14993 1142 aa11.32□□□□□ -0.6
COPS4-202ENST00000503682 BSNDQ8WZ55 320 aa11.32□□□□□ -0.6
COPS4-202ENST00000503682 ZNF558Q96NG5 402 aa11.32□□□□□ -0.6
COPS4-202ENST00000503682 APOL6Q9BWW8 343 aa11.32□□□□□ -0.6
COPS4-202ENST00000503682 NRDE2Q9H7Z3 1164 aa11.32□□□□□ -0.6
COPS4-202ENST00000503682 TUFT1Q9NNX1 390 aa11.32□□□□□ -0.6
COPS4-202ENST00000503682 TBC1D13Q9NVG8 400 aa11.32□□□□□ -0.6
COPS4-202ENST00000503682 BARX2Q9UMQ3 279 aaPredicted RBP11.32□□□□□ -0.6
COPS4-202ENST00000503682 PPME1Q9Y570 386 aa11.32□□□□□ -0.6
COPS4-202ENST00000503682 MYH11P35749 1972 aa11.32□□□□□ -0.6
COPS4-202ENST00000503682 LRRIQ4A6NIV6 560 aa11.32□□□□□ -0.6
COPS4-202ENST00000503682 TTLL13PA6NNM8 815 aa11.32□□□□□ -0.6
COPS4-202ENST00000503682 ASAP2O43150 1006 aa11.32□□□□□ -0.6
COPS4-202ENST00000503682 GAS2O43903 313 aaKnown RBP11.32□□□□□ -0.6
COPS4-202ENST00000503682 ERLIN2O94905 339 aa11.32□□□□□ -0.6
COPS4-202ENST00000503682 POMCP01189 267 aa11.32□□□□□ -0.6
COPS4-202ENST00000503682 RPA1P27694 616 aa11.32□□□□□ -0.6
COPS4-202ENST00000503682 NDUFV1P49821 464 aa11.32□□□□□ -0.6
COPS4-202ENST00000503682 ADAM15Q13444 863 aa11.32□□□□□ -0.6
COPS4-202ENST00000503682 MXD4Q14582 209 aaPredicted RBP11.32□□□□□ -0.6
COPS4-202ENST00000503682 AMHR2Q16671 573 aa11.32□□□□□ -0.6
COPS4-202ENST00000503682 ZNF280BQ86YH2 543 aa11.32□□□□□ -0.6
COPS4-202ENST00000503682 EXOC8Q8IYI6 725 aa11.32□□□□□ -0.6
COPS4-202ENST00000503682 SLC39A11Q8N1S5 342 aa11.32□□□□□ -0.6
COPS4-202ENST00000503682 SMG8Q8ND04 991 aaKnown RBP11.32□□□□□ -0.6
COPS4-202ENST00000503682 VN1R2Q8NFZ6 395 aa11.32□□□□□ -0.6
COPS4-202ENST00000503682 BCL7CQ8WUZ0 217 aaPredicted RBP11.32□□□□□ -0.6
COPS4-202ENST00000503682 AUTS2Q8WXX7 1259 aa11.32□□□□□ -0.6
COPS4-202ENST00000503682 MRPS27Q92552 414 aaKnown RBP11.32□□□□□ -0.6
COPS4-202ENST00000503682 NACC1Q96RE7 527 aa11.32□□□□□ -0.6
COPS4-202ENST00000503682 TCF25Q9BQ70 676 aa11.32□□□□□ -0.6
COPS4-202ENST00000503682 POLR3CQ9BUI4 534 aaPredicted RBP11.32□□□□□ -0.6
COPS4-202ENST00000503682 EPHX3Q9H6B9 360 aa11.32□□□□□ -0.6
COPS4-202ENST00000503682 TLE6Q9H808 572 aa11.32□□□□□ -0.6
COPS4-202ENST00000503682 CLEC1BQ9P126 229 aa11.32□□□□□ -0.6
COPS4-202ENST00000503682 LRWD1Q9UFC0 647 aa11.32□□□□□ -0.6
COPS4-202ENST00000503682 KIAA1024Q9UPX6 916 aa11.32□□□□□ -0.6
COPS4-202ENST00000503682 SMC3Q9UQE7 1217 aa11.32□□□□□ -0.6
COPS4-202ENST00000503682 H3BQV1 296 aa11.31□□□□□ -0.6
COPS4-202ENST00000503682 ZNF623O75123 536 aa11.31□□□□□ -0.6
COPS4-202ENST00000503682 DDHD2O94830 711 aa11.31□□□□□ -0.6
COPS4-202ENST00000503682 EDN1P05305 212 aa11.31□□□□□ -0.6
COPS4-202ENST00000503682 ARF4P18085 180 aaPredicted RBP11.31□□□□□ -0.6
COPS4-202ENST00000503682 LIG1P18858 919 aa11.31□□□□□ -0.6
COPS4-202ENST00000503682 CA8P35219 290 aa11.31□□□□□ -0.6
COPS4-202ENST00000503682 TRAPPC10P48553 1259 aa11.31□□□□□ -0.6
COPS4-202ENST00000503682 PLCB3Q01970 1234 aa11.31□□□□□ -0.6
COPS4-202ENST00000503682 ZRSR1Q15695 479 aaKnown RBP11.31□□□□□ -0.6
COPS4-202ENST00000503682 NOMO2Q5JPE7 1267 aa11.31□□□□□ -0.6
COPS4-202ENST00000503682 LLGL2Q6P1M3 1020 aa11.31□□□□□ -0.6
COPS4-202ENST00000503682 PADI6Q6TGC4 694 aa11.31□□□□□ -0.6
COPS4-202ENST00000503682 GLB1LQ6UWU2 654 aa11.31□□□□□ -0.6
COPS4-202ENST00000503682 FAM178BQ8IXR5 827 aa11.31□□□□□ -0.6
COPS4-202ENST00000503682 ERMNQ8TAM6 284 aa11.31□□□□□ -0.6
COPS4-202ENST00000503682 SNX29Q8TEQ0 813 aa11.31□□□□□ -0.6
COPS4-202ENST00000503682 PLIN2Q99541 437 aa11.31□□□□□ -0.6
COPS4-202ENST00000503682 KIFC3Q9BVG8 833 aa11.31□□□□□ -0.6
COPS4-202ENST00000503682 TRAIPQ9BWF2 469 aa11.31□□□□□ -0.6
COPS4-202ENST00000503682 APOL5Q9BWW9 433 aa11.31□□□□□ -0.6
COPS4-202ENST00000503682 BHMT2Q9H2M3 363 aa11.31□□□□□ -0.6
COPS4-202ENST00000503682 ENTPD7Q9NQZ7 604 aa11.31□□□□□ -0.6
COPS4-202ENST00000503682 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.31□□□□□ -0.6
COPS4-202ENST00000503682 DDX19AQ9NUU7 478 aaKnown RBP11.31□□□□□ -0.6
COPS4-202ENST00000503682 MIOSQ9NXC5 875 aa11.31□□□□□ -0.6
COPS4-202ENST00000503682 SPG21Q9NZD8 308 aa11.31□□□□□ -0.6
COPS4-202ENST00000503682 DBR1Q9UK59 544 aaKnown RBP11.31□□□□□ -0.6
COPS4-202ENST00000503682 IPPQ9Y573 584 aa11.31□□□□□ -0.6
COPS4-202ENST00000503682 ARHGEF35A5YM69 484 aa11.3□□□□□ -0.6
COPS4-202ENST00000503682 E9PMD0 336 aa11.3□□□□□ -0.6
COPS4-202ENST00000503682 FSCN2O14926 492 aa11.3□□□□□ -0.6
COPS4-202ENST00000503682 MBTPS2O43462 519 aa11.3□□□□□ -0.6
COPS4-202ENST00000503682 XRCC6P12956 609 aaKnown RBP eCLIP11.3□□□□□ -0.6
COPS4-202ENST00000503682 UBE3AQ05086 875 aa11.3□□□□□ -0.6
COPS4-202ENST00000503682 RNASELQ05823 741 aaKnown RBP11.3□□□□□ -0.6
COPS4-202ENST00000503682 ORC2Q13416 577 aaPredicted RBP11.3□□□□□ -0.6
COPS4-202ENST00000503682 TFDP1Q14186 410 aa11.3□□□□□ -0.6
COPS4-202ENST00000503682 FAM43BQ6ZT52 329 aaPredicted RBP11.3□□□□□ -0.6
COPS4-202ENST00000503682 TMC7Q7Z402 723 aa11.3□□□□□ -0.6
COPS4-202ENST00000503682 KCNK18Q7Z418 384 aa11.3□□□□□ -0.6
COPS4-202ENST00000503682 RSAD1Q9HA92 442 aa11.3□□□□□ -0.6
COPS4-202ENST00000503682 NPTXRO95502 500 aa11.29□□□□□ -0.6
COPS4-202ENST00000503682 GALTP07902 379 aa11.29□□□□□ -0.6
COPS4-202ENST00000503682 SKIP12755 728 aa11.29□□□□□ -0.6
COPS4-202ENST00000503682 AKAP5P24588 427 aa11.29□□□□□ -0.6
COPS4-202ENST00000503682 SSTR3P32745 418 aaPredicted RBP11.29□□□□□ -0.6
COPS4-202ENST00000503682 SLC11A1P49279 550 aa11.29□□□□□ -0.6
COPS4-202ENST00000503682 ALDH7A1P49419 539 aaKnown RBP11.29□□□□□ -0.6
COPS4-202ENST00000503682 RAB27AP51159 221 aa11.29□□□□□ -0.6
COPS4-202ENST00000503682 DUSP6Q16828 381 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms