RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 SMIM10L2AP0DMW4 78 aa8.88□□□□□ -0.99
TOPBP1-202ENST00000503338 SMIM10L2BP0DMW5 78 aa8.88□□□□□ -0.99
TOPBP1-202ENST00000503338 CYP2J2P51589 502 aa8.88□□□□□ -0.99
TOPBP1-202ENST00000503338 SOX10P56693 466 aa8.88□□□□□ -0.99
TOPBP1-202ENST00000503338 MCCD1P59942 119 aaPredicted RBP8.88□□□□□ -0.99
TOPBP1-202ENST00000503338 PTENP60484 403 aa8.88□□□□□ -0.99
TOPBP1-202ENST00000503338 IGBP1P78318 339 aa8.88□□□□□ -0.99
TOPBP1-202ENST00000503338 TBX2Q13207 712 aaPredicted RBP8.88□□□□□ -0.99
TOPBP1-202ENST00000503338 KYAT1Q16773 422 aa8.88□□□□□ -0.99
TOPBP1-202ENST00000503338 FAM187BQ17R55 369 aa8.88□□□□□ -0.99
TOPBP1-202ENST00000503338 TSR1Q2NL82 804 aaKnown RBP8.88□□□□□ -0.99
TOPBP1-202ENST00000503338 GNASQ5JWF2 1037 aa8.88□□□□□ -0.99
TOPBP1-202ENST00000503338 MIIPQ5JXC2 388 aa8.88□□□□□ -0.99
TOPBP1-202ENST00000503338 TAF2Q6P1X5 1199 aa8.88□□□□□ -0.99
TOPBP1-202ENST00000503338 NFRKBQ6P4R8 1299 aa8.88□□□□□ -0.99
TOPBP1-202ENST00000503338 APBB1IPQ7Z5R6 666 aaPredicted RBP8.88□□□□□ -0.99
TOPBP1-202ENST00000503338 SRGAP1Q7Z6B7 1085 aa8.88□□□□□ -0.99
TOPBP1-202ENST00000503338 RNF180Q86T96 592 aa8.88□□□□□ -0.99
TOPBP1-202ENST00000503338 ZSCAN30Q86W11 494 aa8.88□□□□□ -0.99
TOPBP1-202ENST00000503338 RHPN2Q8IUC4 686 aa8.88□□□□□ -0.99
TOPBP1-202ENST00000503338 KSR1Q8IVT5 923 aa8.88□□□□□ -0.99
TOPBP1-202ENST00000503338 LRRC8AQ8IWT6 810 aa8.88□□□□□ -0.99
TOPBP1-202ENST00000503338 LRRC71Q8N4P6 559 aa8.88□□□□□ -0.99
TOPBP1-202ENST00000503338 C7orf31Q8N865 590 aa8.88□□□□□ -0.99
TOPBP1-202ENST00000503338 TRPV1Q8NER1 839 aa8.88□□□□□ -0.99
TOPBP1-202ENST00000503338 ZNF397Q8NF99 534 aaPredicted RBP8.88□□□□□ -0.99
TOPBP1-202ENST00000503338 POMGNT1Q8WZA1 660 aa8.88□□□□□ -0.99
TOPBP1-202ENST00000503338 KAT2BQ92831 832 aa8.88□□□□□ -0.99
TOPBP1-202ENST00000503338 KIFC3Q9BVG8 833 aa8.88□□□□□ -0.99
TOPBP1-202ENST00000503338 NAA15Q9BXJ9 866 aaKnown RBP8.88□□□□□ -0.99
TOPBP1-202ENST00000503338 SEZ6LQ9BYH1 1024 aa8.88□□□□□ -0.99
TOPBP1-202ENST00000503338 EDEM3Q9BZQ6 932 aa8.88□□□□□ -0.99
TOPBP1-202ENST00000503338 INO80BQ9C086 356 aaPredicted RBP8.88□□□□□ -0.99
TOPBP1-202ENST00000503338 XPNPEP3Q9NQH7 507 aa8.88□□□□□ -0.99
TOPBP1-202ENST00000503338 HSPBP1Q9NZL4 362 aa8.88□□□□□ -0.99
TOPBP1-202ENST00000503338 DDX20Q9UHI6 824 aaKnown RBP8.88□□□□□ -0.99
TOPBP1-202ENST00000503338 A0A1W2PQJ5 194 aa8.87□□□□□ -0.99
TOPBP1-202ENST00000503338 MOXD2PA6NHM9 499 aa8.87□□□□□ -0.99
TOPBP1-202ENST00000503338 ACKR2O00590 384 aa8.87□□□□□ -0.99
TOPBP1-202ENST00000503338 PMM2O15305 246 aa8.87□□□□□ -0.99
TOPBP1-202ENST00000503338 EXTL3O43909 919 aa8.87□□□□□ -0.99
TOPBP1-202ENST00000503338 TOM1L1O75674 476 aa8.87□□□□□ -0.99
TOPBP1-202ENST00000503338 PRKCBP05771 671 aa8.87□□□□□ -0.99
TOPBP1-202ENST00000503338 SRGAP2CP0DJJ0 459 aa8.87□□□□□ -0.99
TOPBP1-202ENST00000503338 TRIM21P19474 475 aaKnown RBP8.87□□□□□ -0.99
TOPBP1-202ENST00000503338 PTGS1P23219 599 aa8.87□□□□□ -0.99
TOPBP1-202ENST00000503338 MSNP26038 577 aaKnown RBP8.87□□□□□ -0.99
TOPBP1-202ENST00000503338 HOXC8P31273 242 aa8.87□□□□□ -0.99
TOPBP1-202ENST00000503338 GRK4P32298 578 aa8.87□□□□□ -0.99
TOPBP1-202ENST00000503338 GTF2H1P32780 548 aa8.87□□□□□ -0.99
TOPBP1-202ENST00000503338 CLCN3P51790 818 aa8.87□□□□□ -0.99
TOPBP1-202ENST00000503338 POU5F1Q01860 360 aaKnown RBP8.87□□□□□ -0.99
TOPBP1-202ENST00000503338 NCBP1Q09161 790 aaKnown RBP8.87□□□□□ -0.99
TOPBP1-202ENST00000503338 KCNH2Q12809 1159 aa8.87□□□□□ -0.99
TOPBP1-202ENST00000503338 BFSP1Q12934 665 aa8.87□□□□□ -0.99
TOPBP1-202ENST00000503338 MKRN4PQ13434 485 aaPredicted RBP8.87□□□□□ -0.99
TOPBP1-202ENST00000503338 RSPH3Q86UC2 560 aa8.87□□□□□ -0.99
TOPBP1-202ENST00000503338 FMNL3Q8IVF7 1028 aa8.87□□□□□ -0.99
TOPBP1-202ENST00000503338 GPD1LQ8N335 351 aa8.87□□□□□ -0.99
TOPBP1-202ENST00000503338 KLHDC9Q8NEP7 349 aa8.87□□□□□ -0.99
TOPBP1-202ENST00000503338 TMC2Q8TDI7 906 aa8.87□□□□□ -0.99
TOPBP1-202ENST00000503338 LMBR1Q8WVP7 490 aa8.87□□□□□ -0.99
TOPBP1-202ENST00000503338 TRAPPC12Q8WVT3 735 aa8.87□□□□□ -0.99
TOPBP1-202ENST00000503338 EEF2KMTQ96G04 330 aa8.87□□□□□ -0.99
TOPBP1-202ENST00000503338 BORCS6Q96GS4 357 aa8.87□□□□□ -0.99
TOPBP1-202ENST00000503338 FBXL18Q96ME1 805 aa8.87□□□□□ -0.99
TOPBP1-202ENST00000503338 NLRP4Q96MN2 994 aa8.87□□□□□ -0.99
TOPBP1-202ENST00000503338 PANX2Q96RD6 677 aa8.87□□□□□ -0.99
TOPBP1-202ENST00000503338 TSEN34Q9BSV6 310 aaKnown RBP8.87□□□□□ -0.99
TOPBP1-202ENST00000503338 CCDC113Q9H0I3 377 aa8.87□□□□□ -0.99
TOPBP1-202ENST00000503338 NUCKS1Q9H1E3 243 aaKnown RBP8.87□□□□□ -0.99
TOPBP1-202ENST00000503338 FZD8Q9H461 694 aa8.87□□□□□ -0.99
TOPBP1-202ENST00000503338 HMX1Q9NP08 348 aaPredicted RBP8.87□□□□□ -0.99
TOPBP1-202ENST00000503338 ZKSCAN5Q9Y2L8 839 aa8.87□□□□□ -0.99
TOPBP1-202ENST00000503338 ZNF233A6NK53 670 aa8.86□□□□□ -0.99
TOPBP1-202ENST00000503338 INO80B-WBP1J3KQ70 363 aa8.86□□□□□ -0.99
TOPBP1-202ENST00000503338 CLDN3O15551 220 aa8.86□□□□□ -0.99
TOPBP1-202ENST00000503338 ADAMTS4O75173 837 aa8.86□□□□□ -0.99
TOPBP1-202ENST00000503338 CYP2C9P11712 490 aa8.86□□□□□ -0.99
TOPBP1-202ENST00000503338 ELNP15502 786 aa8.86□□□□□ -0.99
TOPBP1-202ENST00000503338 CCND3P30281 292 aaPredicted RBP8.86□□□□□ -0.99
TOPBP1-202ENST00000503338 KCNJ6P48051 423 aa8.86□□□□□ -0.99
TOPBP1-202ENST00000503338 CASP4P49662 377 aa8.86□□□□□ -0.99
TOPBP1-202ENST00000503338 VAMP7P51809 220 aa8.86□□□□□ -0.99
TOPBP1-202ENST00000503338 ADAM17P78536 824 aa8.86□□□□□ -0.99
TOPBP1-202ENST00000503338 HTRA3P83110 453 aa8.86□□□□□ -0.99
TOPBP1-202ENST00000503338 BEX3Q00994 111 aa8.86□□□□□ -0.99
TOPBP1-202ENST00000503338 PTPN11Q06124 597 aaPredicted RBP8.86□□□□□ -0.99
TOPBP1-202ENST00000503338 DRP2Q13474 957 aa8.86□□□□□ -0.99
TOPBP1-202ENST00000503338 PRPF4BQ13523 1007 aaKnown RBP8.86□□□□□ -0.99
TOPBP1-202ENST00000503338 SYCP1Q15431 976 aa8.86□□□□□ -0.99
TOPBP1-202ENST00000503338 SURF1Q15526 300 aa8.86□□□□□ -0.99
TOPBP1-202ENST00000503338 SNRNP35Q16560 246 aaKnown RBP8.86□□□□□ -0.99
TOPBP1-202ENST00000503338 DCAF17Q5H9S7 520 aaPredicted RBP8.86□□□□□ -0.99
TOPBP1-202ENST00000503338 MARCH8Q5T0T0 291 aa8.86□□□□□ -0.99
TOPBP1-202ENST00000503338 TCERG1LQ5VWI1 586 aa8.86□□□□□ -0.99
TOPBP1-202ENST00000503338 GBP6Q6ZN66 633 aa8.86□□□□□ -0.99
TOPBP1-202ENST00000503338 TSHZ1Q6ZSZ6 1077 aa8.86□□□□□ -0.99
TOPBP1-202ENST00000503338 TAS1R3Q7RTX0 852 aa8.86□□□□□ -0.99
TOPBP1-202ENST00000503338 SESTD1Q86VW0 696 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms