RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 PPCSQ9HAB8 311 aa6.59□□□□□ -1.35
HMGB1P3-201ENST00000502802 PCDHA13Q9Y5I0 950 aa6.59□□□□□ -1.35
HMGB1P3-201ENST00000502802 NR2E3Q9Y5X4 410 aa6.59□□□□□ -1.35
HMGB1P3-201ENST00000502802 HRKO00198 91 aa6.58□□□□□ -1.36
HMGB1P3-201ENST00000502802 MGEA5O60502 916 aa6.58□□□□□ -1.36
HMGB1P3-201ENST00000502802 TCEA3O75764 348 aa6.58□□□□□ -1.36
HMGB1P3-201ENST00000502802 SETSIPP0DME0 302 aa6.58□□□□□ -1.36
HMGB1P3-201ENST00000502802 ANTXR2P58335 489 aa6.58□□□□□ -1.36
HMGB1P3-201ENST00000502802 GPSM2P81274 684 aa6.58□□□□□ -1.36
HMGB1P3-201ENST00000502802 CHAF1AQ13111 956 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P3-201ENST00000502802 CCDC157Q569K6 752 aa6.58□□□□□ -1.36
HMGB1P3-201ENST00000502802 HSP90AB4PQ58FF6 505 aa6.58□□□□□ -1.36
HMGB1P3-201ENST00000502802 XRRA1Q6P2D8 792 aa6.58□□□□□ -1.36
HMGB1P3-201ENST00000502802 C1orf228Q6PIY5 440 aa6.58□□□□□ -1.36
HMGB1P3-201ENST00000502802 DRC7Q8IY82 874 aa6.58□□□□□ -1.36
HMGB1P3-201ENST00000502802 KRT78Q8N1N4 520 aa6.58□□□□□ -1.36
HMGB1P3-201ENST00000502802 VPS37AQ8NEZ2 397 aa6.58□□□□□ -1.36
HMGB1P3-201ENST00000502802 GPR156Q8NFN8 814 aa6.58□□□□□ -1.36
HMGB1P3-201ENST00000502802 LRTOMTQ8WZ04 291 aa6.58□□□□□ -1.36
HMGB1P3-201ENST00000502802 DYDC2Q96IM9 177 aa6.58□□□□□ -1.36
HMGB1P3-201ENST00000502802 CDK5RAP3Q96JB5 506 aa6.58□□□□□ -1.36
HMGB1P3-201ENST00000502802 CCDC138Q96M89 665 aa6.58□□□□□ -1.36
HMGB1P3-201ENST00000502802 TBCBQ99426 244 aa6.58□□□□□ -1.36
HMGB1P3-201ENST00000502802 APOL5Q9BWW9 433 aa6.58□□□□□ -1.36
HMGB1P3-201ENST00000502802 POLR3BQ9NW08 1133 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P3-201ENST00000502802 ZFP69BQ9UJL9 534 aa6.58□□□□□ -1.36
HMGB1P3-201ENST00000502802 PCDHB1Q9Y5F3 818 aa6.58□□□□□ -1.36
HMGB1P3-201ENST00000502802 A0A088AWK7 358 aa6.57□□□□□ -1.36
HMGB1P3-201ENST00000502802 ABHD14A-ACY1A0A1B0GW23 586 aa6.57□□□□□ -1.36
HMGB1P3-201ENST00000502802 CFAP69A5D8W1 941 aa6.57□□□□□ -1.36
HMGB1P3-201ENST00000502802 AKR1B10O60218 316 aa6.57□□□□□ -1.36
HMGB1P3-201ENST00000502802 CYP2C8P10632 490 aa6.57□□□□□ -1.36
HMGB1P3-201ENST00000502802 FBLN1P23142 703 aa6.57□□□□□ -1.36
HMGB1P3-201ENST00000502802 ITGB7P26010 798 aa6.57□□□□□ -1.36
HMGB1P3-201ENST00000502802 VIPR1P32241 457 aa6.57□□□□□ -1.36
HMGB1P3-201ENST00000502802 MEF2AQ02078 507 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P3-201ENST00000502802 POLD3Q15054 466 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P3-201ENST00000502802 GJC2Q5T442 439 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P3-201ENST00000502802 PHF19Q5T6S3 580 aa6.57□□□□□ -1.36
HMGB1P3-201ENST00000502802 GRAMD4Q6IC98 578 aa6.57□□□□□ -1.36
HMGB1P3-201ENST00000502802 SWSAP1Q6NVH7 229 aa6.57□□□□□ -1.36
HMGB1P3-201ENST00000502802 ERAP2Q6P179 960 aa6.57□□□□□ -1.36
HMGB1P3-201ENST00000502802 STPG3Q8N7X2 389 aa6.57□□□□□ -1.36
HMGB1P3-201ENST00000502802 NSUN6Q8TEA1 469 aaKnown RBP6.57□□□□□ -1.36
HMGB1P3-201ENST00000502802 OSBPL6Q9BZF3 934 aa6.57□□□□□ -1.36
HMGB1P3-201ENST00000502802 PCDH18Q9HCL0 1135 aa6.57□□□□□ -1.36
HMGB1P3-201ENST00000502802 KCND1Q9NSA2 647 aa6.57□□□□□ -1.36
HMGB1P3-201ENST00000502802 PCMTD2Q9NV79 361 aa6.57□□□□□ -1.36
HMGB1P3-201ENST00000502802 RTEL1Q9NZ71 1219 aa6.57□□□□□ -1.36
HMGB1P3-201ENST00000502802 FNIP2Q9P278 1114 aa6.57□□□□□ -1.36
HMGB1P3-201ENST00000502802 SAE1Q9UBE0 346 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P3-201ENST00000502802 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P3-201ENST00000502802 MAGEL2Q9UJ55 1249 aa6.57□□□□□ -1.36
HMGB1P3-201ENST00000502802 RPTORQ8N122 1335 aa6.56□□□□□ -1.36
HMGB1P3-201ENST00000502802 SGTAO43765 313 aa6.56□□□□□ -1.36
HMGB1P3-201ENST00000502802 TMEM127O75204 238 aa6.56□□□□□ -1.36
HMGB1P3-201ENST00000502802 CD69Q07108 199 aa6.56□□□□□ -1.36
HMGB1P3-201ENST00000502802 STK3Q13188 491 aa6.56□□□□□ -1.36
HMGB1P3-201ENST00000502802 KRT72Q14CN4 511 aa6.56□□□□□ -1.36
HMGB1P3-201ENST00000502802 SEPT2Q15019 361 aa6.56□□□□□ -1.36
HMGB1P3-201ENST00000502802 MAN2A1Q16706 1144 aa6.56□□□□□ -1.36
HMGB1P3-201ENST00000502802 WDR72Q3MJ13 1102 aa6.56□□□□□ -1.36
HMGB1P3-201ENST00000502802 INO80DQ53TQ3 878 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P3-201ENST00000502802 SKAP1Q86WV1 359 aa6.56□□□□□ -1.36
HMGB1P3-201ENST00000502802 RHOT1Q8IXI2 618 aa6.56□□□□□ -1.36
HMGB1P3-201ENST00000502802 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.56□□□□□ -1.36
HMGB1P3-201ENST00000502802 EVI5LQ96CN4 794 aa6.56□□□□□ -1.36
HMGB1P3-201ENST00000502802 SGCZQ96LD1 299 aa6.56□□□□□ -1.36
HMGB1P3-201ENST00000502802 PTPN18Q99952 460 aa6.56□□□□□ -1.36
HMGB1P3-201ENST00000502802 ZNF552Q9H707 407 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P3-201ENST00000502802 RSAD1Q9HA92 442 aa6.56□□□□□ -1.36
HMGB1P3-201ENST00000502802 IRS2Q9Y4H2 1338 aa6.55□□□□□ -1.36
HMGB1P3-201ENST00000502802 A0A1W2PR48 441 aa6.55□□□□□ -1.36
HMGB1P3-201ENST00000502802 PHF2O75151 1096 aa6.55□□□□□ -1.36
HMGB1P3-201ENST00000502802 ENDOD1O94919 500 aa6.55□□□□□ -1.36
HMGB1P3-201ENST00000502802 FSBPO95073 299 aa6.55□□□□□ -1.36
HMGB1P3-201ENST00000502802 LY86O95711 162 aa6.55□□□□□ -1.36
HMGB1P3-201ENST00000502802 LTA4HP09960 611 aaKnown RBP6.55□□□□□ -1.36
HMGB1P3-201ENST00000502802 MYF5P13349 255 aa6.55□□□□□ -1.36
HMGB1P3-201ENST00000502802 CTSSP25774 331 aa6.55□□□□□ -1.36
HMGB1P3-201ENST00000502802 MC3RP41968 323 aa6.55□□□□□ -1.36
HMGB1P3-201ENST00000502802 TRAPPC10P48553 1259 aa6.55□□□□□ -1.36
HMGB1P3-201ENST00000502802 HK3P52790 923 aa6.55□□□□□ -1.36
HMGB1P3-201ENST00000502802 RAB1AP62820 205 aa6.55□□□□□ -1.36
HMGB1P3-201ENST00000502802 FGL2Q14314 439 aa6.55□□□□□ -1.36
HMGB1P3-201ENST00000502802 TARBP2Q15633 366 aaKnown RBP6.55□□□□□ -1.36
HMGB1P3-201ENST00000502802 TMEM200BQ69YZ2 307 aa6.55□□□□□ -1.36
HMGB1P3-201ENST00000502802 OTOP2Q7RTS6 562 aa6.55□□□□□ -1.36
HMGB1P3-201ENST00000502802 FAM129CQ86XR2 697 aa6.55□□□□□ -1.36
HMGB1P3-201ENST00000502802 COL23A1Q86Y22 540 aaPredicted RBP6.55□□□□□ -1.36
HMGB1P3-201ENST00000502802 C3orf20Q8ND61 904 aa6.55□□□□□ -1.36
HMGB1P3-201ENST00000502802 PLBD2Q8NHP8 589 aa6.55□□□□□ -1.36
HMGB1P3-201ENST00000502802 SMARCC2Q8TAQ2 1214 aa6.55□□□□□ -1.36
HMGB1P3-201ENST00000502802 CLIC6Q96NY7 704 aa6.55□□□□□ -1.36
HMGB1P3-201ENST00000502802 WRNIP1Q96S55 665 aa6.55□□□□□ -1.36
HMGB1P3-201ENST00000502802 SYT3Q9BQG1 590 aa6.55□□□□□ -1.36
HMGB1P3-201ENST00000502802 SELENOOQ9BVL4 669 aa6.55□□□□□ -1.36
HMGB1P3-201ENST00000502802 DCP1AQ9NPI6 582 aaPredicted RBP6.55□□□□□ -1.36
HMGB1P3-201ENST00000502802 DNAI1Q9UI46 699 aa6.55□□□□□ -1.36
HMGB1P3-201ENST00000502802 FBXO10Q9UK96 956 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms