RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 JAK3P52333 1124 aa13.11□□□□□ -0.31
CDK9-205ENST00000498339 PHLDB3Q6NSJ2 640 aa13.11□□□□□ -0.31
CDK9-205ENST00000498339 SPATA31D4Q6ZUB0 917 aa13.11□□□□□ -0.31
CDK9-205ENST00000498339 ZNF410Q86VK4 478 aa13.11□□□□□ -0.31
CDK9-205ENST00000498339 PJA1Q8NG27 643 aa13.11□□□□□ -0.31
CDK9-205ENST00000498339 CCDC12Q8WUD4 166 aaPredicted RBP13.11□□□□□ -0.31
CDK9-205ENST00000498339 TCEANC2Q96MN5 208 aa13.11□□□□□ -0.31
CDK9-205ENST00000498339 RPS6KC1Q96S38 1066 aa13.11□□□□□ -0.31
CDK9-205ENST00000498339 SH2D3AQ9BRG2 576 aa13.11□□□□□ -0.31
CDK9-205ENST00000498339 TMEM175Q9BSA9 504 aa13.11□□□□□ -0.31
CDK9-205ENST00000498339 HERC2P3Q9BVR0 1158 aa13.11□□□□□ -0.31
CDK9-205ENST00000498339 TRAIPQ9BWF2 469 aa13.11□□□□□ -0.31
CDK9-205ENST00000498339 TEKT3Q9BXF9 490 aa13.11□□□□□ -0.31
CDK9-205ENST00000498339 SPATA6Q9NWH7 488 aaPredicted RBP13.11□□□□□ -0.31
CDK9-205ENST00000498339 SUCLA2Q9P2R7 463 aaPredicted RBP13.11□□□□□ -0.31
CDK9-205ENST00000498339 PCDHB2Q9Y5E7 798 aa13.11□□□□□ -0.31
CDK9-205ENST00000498339 OTOGLQ3ZCN5 2332 aa13.11□□□□□ -0.31
CDK9-205ENST00000498339 DOCK6Q96HP0 2047 aa13.1□□□□□ -0.31
CDK9-205ENST00000498339 KLF18A0A0U1RQI7 1052 aa13.1□□□□□ -0.31
CDK9-205ENST00000498339 TMEM150BA6NC51 233 aa13.1□□□□□ -0.31
CDK9-205ENST00000498339 POTEMA6NI47 508 aa13.1□□□□□ -0.31
CDK9-205ENST00000498339 SFNP31947 248 aa13.1□□□□□ -0.31
CDK9-205ENST00000498339 FUT2Q10981 343 aa13.1□□□□□ -0.31
CDK9-205ENST00000498339 PFKFB3Q16875 520 aaPredicted RBP13.1□□□□□ -0.31
CDK9-205ENST00000498339 LRCH2Q5VUJ6 765 aa13.1□□□□□ -0.31
CDK9-205ENST00000498339 POTEGQ6S5H5 508 aa13.1□□□□□ -0.31
CDK9-205ENST00000498339 CYP26C1Q6V0L0 522 aa13.1□□□□□ -0.31
CDK9-205ENST00000498339 GLYCTKQ8IVS8 523 aa13.1□□□□□ -0.31
CDK9-205ENST00000498339 CRYGNQ8WXF5 182 aa13.1□□□□□ -0.31
CDK9-205ENST00000498339 SECISBP2LQ93073 1101 aaKnown RBP13.1□□□□□ -0.31
CDK9-205ENST00000498339 LSG1Q9H089 658 aaKnown RBP13.1□□□□□ -0.31
CDK9-205ENST00000498339 UNC45AQ9H3U1 944 aa13.1□□□□□ -0.31
CDK9-205ENST00000498339 ANO2Q9NQ90 1003 aa13.1□□□□□ -0.31
CDK9-205ENST00000498339 KANSL3Q9P2N6 904 aa13.1□□□□□ -0.31
CDK9-205ENST00000498339 CDV3Q9UKY7 258 aaKnown RBP13.1□□□□□ -0.31
CDK9-205ENST00000498339 NUMBLQ9Y6R0 609 aa13.1□□□□□ -0.31
CDK9-205ENST00000498339 CEP250Q9BV73 2442 aa13.1□□□□□ -0.31
CDK9-205ENST00000498339 CNTNAP2Q9UHC6 1331 aa13.1□□□□□ -0.31
CDK9-205ENST00000498339 COL4A3Q01955 1670 aa13.09□□□□□ -0.31
CDK9-205ENST00000498339 LAMTOR5O43504 91 aa13.09□□□□□ -0.31
CDK9-205ENST00000498339 ZNF623O75123 536 aa13.09□□□□□ -0.31
CDK9-205ENST00000498339 LRRN2O75325 713 aa13.09□□□□□ -0.31
CDK9-205ENST00000498339 GNA11P29992 359 aa13.09□□□□□ -0.31
CDK9-205ENST00000498339 FGD1P98174 961 aa13.09□□□□□ -0.31
CDK9-205ENST00000498339 MIER3Q7Z3K6 550 aa13.09□□□□□ -0.31
CDK9-205ENST00000498339 PALB2Q86YC2 1186 aa13.09□□□□□ -0.31
CDK9-205ENST00000498339 KSR1Q8IVT5 923 aa13.09□□□□□ -0.31
CDK9-205ENST00000498339 GJA10Q969M2 543 aa13.09□□□□□ -0.31
CDK9-205ENST00000498339 SHDQ96IW2 340 aa13.09□□□□□ -0.31
CDK9-205ENST00000498339 BCO2Q9BYV7 579 aa13.09□□□□□ -0.31
CDK9-205ENST00000498339 AGPAT5Q9NUQ2 364 aa13.09□□□□□ -0.31
CDK9-205ENST00000498339 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.09□□□□□ -0.31
CDK9-205ENST00000498339 DLGAP2Q9P1A6 1054 aa13.09□□□□□ -0.31
CDK9-205ENST00000498339 BRPF3Q9ULD4 1205 aa13.09□□□□□ -0.31
CDK9-205ENST00000498339 ARID2Q68CP9 1835 aa13.09□□□□□ -0.31
CDK9-205ENST00000498339 ESYT2A0FGR8 921 aa13.08□□□□□ -0.32
CDK9-205ENST00000498339 ADAMTS3O15072 1205 aa13.08□□□□□ -0.32
CDK9-205ENST00000498339 SPTLC1O15269 473 aa13.08□□□□□ -0.32
CDK9-205ENST00000498339 MSH4O15457 936 aa13.08□□□□□ -0.32
CDK9-205ENST00000498339 LILRB3O75022 631 aa13.08□□□□□ -0.32
CDK9-205ENST00000498339 LAMP2P13473 410 aa13.08□□□□□ -0.32
CDK9-205ENST00000498339 SDHBP21912 280 aa13.08□□□□□ -0.32
CDK9-205ENST00000498339 CDC27P30260 824 aa13.08□□□□□ -0.32
CDK9-205ENST00000498339 AFF1P51825 1210 aaKnown RBP13.08□□□□□ -0.32
CDK9-205ENST00000498339 HTR4Q13639 388 aa13.08□□□□□ -0.32
CDK9-205ENST00000498339 UBXN2BQ14CS0 331 aa13.08□□□□□ -0.32
CDK9-205ENST00000498339 TARBP2Q15633 366 aaKnown RBP13.08□□□□□ -0.32
CDK9-205ENST00000498339 XKR3Q5GH77 459 aa13.08□□□□□ -0.32
CDK9-205ENST00000498339 VARS2Q5ST30 1063 aaKnown RBP13.08□□□□□ -0.32
CDK9-205ENST00000498339 RNF20Q5VTR2 975 aa13.08□□□□□ -0.32
CDK9-205ENST00000498339 AGMOQ6ZNB7 445 aa13.08□□□□□ -0.32
CDK9-205ENST00000498339 TAS1R1Q7RTX1 841 aa13.08□□□□□ -0.32
CDK9-205ENST00000498339 SUMF1Q8NBK3 374 aa13.08□□□□□ -0.32
CDK9-205ENST00000498339 BICD2Q8TD16 824 aa13.08□□□□□ -0.32
CDK9-205ENST00000498339 ATRIPQ8WXE1 791 aa13.08□□□□□ -0.32
CDK9-205ENST00000498339 CCDC136Q96JN2 1154 aa13.08□□□□□ -0.32
CDK9-205ENST00000498339 JPH2Q9BR39 696 aaPredicted RBP13.08□□□□□ -0.32
CDK9-205ENST00000498339 ZMYND12Q9H0C1 365 aa13.08□□□□□ -0.32
CDK9-205ENST00000498339 MARCH5Q9NX47 278 aa13.08□□□□□ -0.32
CDK9-205ENST00000498339 USP18Q9UMW8 372 aa13.08□□□□□ -0.32
CDK9-205ENST00000498339 NCOR2Q9Y618 2525 aa13.08□□□□□ -0.32
CDK9-205ENST00000498339 DDX11L8A8MPP1 907 aa13.07□□□□□ -0.32
CDK9-205ENST00000498339 GAS2O43903 313 aaKnown RBP13.07□□□□□ -0.32
CDK9-205ENST00000498339 NR1I2O75469 434 aa13.07□□□□□ -0.32
CDK9-205ENST00000498339 ITGA4P13612 1032 aa13.07□□□□□ -0.32
CDK9-205ENST00000498339 GLULP15104 373 aa13.07□□□□□ -0.32
CDK9-205ENST00000498339 CIITAP33076 1130 aa13.07□□□□□ -0.32
CDK9-205ENST00000498339 AKAP17AQ02040 695 aaKnown RBP13.07□□□□□ -0.32
CDK9-205ENST00000498339 CSTF1Q05048 431 aaKnown RBP13.07□□□□□ -0.32
CDK9-205ENST00000498339 SNW1Q13573 536 aaKnown RBP13.07□□□□□ -0.32
CDK9-205ENST00000498339 PLA2G4FQ68DD2 849 aa13.07□□□□□ -0.32
CDK9-205ENST00000498339 LENG9Q96B70 501 aa13.07□□□□□ -0.32
CDK9-205ENST00000498339 ZNF707Q96C28 371 aaPredicted RBP13.07□□□□□ -0.32
CDK9-205ENST00000498339 RIT2Q99578 217 aa13.07□□□□□ -0.32
CDK9-205ENST00000498339 NIFKQ9BYG3 293 aaKnown RBP13.07□□□□□ -0.32
CDK9-205ENST00000498339 RHOBTB2Q9BYZ6 727 aa13.07□□□□□ -0.32
CDK9-205ENST00000498339 NT5C3AQ9H0P0 336 aa13.07□□□□□ -0.32
CDK9-205ENST00000498339 PLEKHA4Q9H4M7 779 aa13.07□□□□□ -0.32
CDK9-205ENST00000498339 SLC2A4RGQ9NR83 387 aa13.07□□□□□ -0.32
CDK9-205ENST00000498339 COL4A3BPQ9Y5P4 624 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms