RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 ZNF627Q7L945 461 aa4.54□□□□□ -1.68
PSPC1-205ENST00000497722 LYSMD2Q8IV50 215 aa4.54□□□□□ -1.68
PSPC1-205ENST00000497722 PIK3C3Q8NEB9 887 aa4.54□□□□□ -1.68
PSPC1-205ENST00000497722 MDGA1Q8NFP4 955 aa4.54□□□□□ -1.68
PSPC1-205ENST00000497722 ATL2Q8NHH9 583 aa4.54□□□□□ -1.68
PSPC1-205ENST00000497722 ZNF483Q8TF39 744 aaPredicted RBP4.54□□□□□ -1.68
PSPC1-205ENST00000497722 CHFRQ96EP1 664 aa4.54□□□□□ -1.68
PSPC1-205ENST00000497722 GPR101Q96P66 508 aaPredicted RBP4.54□□□□□ -1.68
PSPC1-205ENST00000497722 IKZF4Q9H2S9 585 aa4.54□□□□□ -1.68
PSPC1-205ENST00000497722 PARPBPQ9NWS1 579 aa4.54□□□□□ -1.68
PSPC1-205ENST00000497722 THG1LQ9NWX6 298 aaKnown RBP4.54□□□□□ -1.68
PSPC1-205ENST00000497722 USP36Q9P275 1121 aaKnown RBP4.54□□□□□ -1.68
PSPC1-205ENST00000497722 TRPS1Q9UHF7 1281 aa4.54□□□□□ -1.68
PSPC1-205ENST00000497722 TMPRSS11EQ9UL52 423 aa4.54□□□□□ -1.68
PSPC1-205ENST00000497722 DAPK3O43293 454 aa4.53□□□□□ -1.68
PSPC1-205ENST00000497722 PPFIA2O75334 1257 aa4.53□□□□□ -1.68
PSPC1-205ENST00000497722 STC2O76061 302 aa4.53□□□□□ -1.68
PSPC1-205ENST00000497722 MAN2A2P49641 1150 aa4.53□□□□□ -1.68
PSPC1-205ENST00000497722 MAN2A1Q16706 1144 aa4.53□□□□□ -1.68
PSPC1-205ENST00000497722 ZNF662Q6ZS27 426 aa4.53□□□□□ -1.68
PSPC1-205ENST00000497722 RHOUQ7L0Q8 258 aa4.53□□□□□ -1.68
PSPC1-205ENST00000497722 SLC41A1Q8IVJ1 513 aa4.53□□□□□ -1.68
PSPC1-205ENST00000497722 ULK2Q8IYT8 1036 aa4.53□□□□□ -1.68
PSPC1-205ENST00000497722 UNC5BQ8IZJ1 945 aa4.53□□□□□ -1.68
PSPC1-205ENST00000497722 ZNF512Q96ME7 567 aaPredicted RBP4.53□□□□□ -1.68
PSPC1-205ENST00000497722 TTC1Q99614 292 aa4.53□□□□□ -1.68
PSPC1-205ENST00000497722 FDXACB1Q9BRP7 624 aaPredicted RBP4.53□□□□□ -1.68
PSPC1-205ENST00000497722 NOL10Q9BSC4 688 aaKnown RBP4.53□□□□□ -1.68
PSPC1-205ENST00000497722 MCM8Q9UJA3 840 aa4.53□□□□□ -1.68
PSPC1-205ENST00000497722 LCHNA4D1U4 455 aa4.52□□□□□ -1.69
PSPC1-205ENST00000497722 GOLGA8BA8MQT2 603 aa4.52□□□□□ -1.69
PSPC1-205ENST00000497722 FSBPO95073 299 aa4.52□□□□□ -1.69
PSPC1-205ENST00000497722 CFBP00751 764 aa4.52□□□□□ -1.69
PSPC1-205ENST00000497722 NANOS3P60323 173 aaKnown RBP4.52□□□□□ -1.69
PSPC1-205ENST00000497722 CD69Q07108 199 aa4.52□□□□□ -1.69
PSPC1-205ENST00000497722 TERF2Q15554 542 aa4.52□□□□□ -1.69
PSPC1-205ENST00000497722 MFSD5Q6N075 450 aa4.52□□□□□ -1.69
PSPC1-205ENST00000497722 ELOA2Q8IYF1 753 aaPredicted RBP4.52□□□□□ -1.69
PSPC1-205ENST00000497722 ZNF610Q8N9Z0 462 aa4.52□□□□□ -1.69
PSPC1-205ENST00000497722 HIST1H2AHQ96KK5 128 aa4.52□□□□□ -1.69
PSPC1-205ENST00000497722 MNTQ99583 582 aa4.52□□□□□ -1.69
PSPC1-205ENST00000497722 HIST1H2AJQ99878 128 aa4.52□□□□□ -1.69
PSPC1-205ENST00000497722 MS4A5Q9H3V2 200 aa4.52□□□□□ -1.69
PSPC1-205ENST00000497722 SLC2A4RGQ9NR83 387 aa4.52□□□□□ -1.69
PSPC1-205ENST00000497722 SPTLC3Q9NUV7 552 aa4.52□□□□□ -1.69
PSPC1-205ENST00000497722 ING3Q9NXR8 418 aa4.52□□□□□ -1.69
PSPC1-205ENST00000497722 SYNPO2Q9UMS6 1093 aa4.52□□□□□ -1.69
PSPC1-205ENST00000497722 PCDHB6Q9Y5E3 794 aa4.52□□□□□ -1.69
PSPC1-205ENST00000497722 A0A087X0B3 334 aa4.51□□□□□ -1.69
PSPC1-205ENST00000497722 A0A1W2PR48 441 aa4.51□□□□□ -1.69
PSPC1-205ENST00000497722 GSG1L2A8MUP6 293 aa4.51□□□□□ -1.69
PSPC1-205ENST00000497722 MAFGO15525 162 aa4.51□□□□□ -1.69
PSPC1-205ENST00000497722 PCDH8O95206 1070 aa4.51□□□□□ -1.69
PSPC1-205ENST00000497722 APOL3O95236 402 aa4.51□□□□□ -1.69
PSPC1-205ENST00000497722 LY86O95711 162 aa4.51□□□□□ -1.69
PSPC1-205ENST00000497722 MAKP20794 623 aa4.51□□□□□ -1.69
PSPC1-205ENST00000497722 NR4A1P22736 598 aa4.51□□□□□ -1.69
PSPC1-205ENST00000497722 ANAPC15P60006 121 aa4.51□□□□□ -1.69
PSPC1-205ENST00000497722 CRHR2Q13324 411 aa4.51□□□□□ -1.69
PSPC1-205ENST00000497722 ESPNLQ6ZVH7 1005 aa4.51□□□□□ -1.69
PSPC1-205ENST00000497722 THNSL2Q86YJ6 484 aa4.51□□□□□ -1.69
PSPC1-205ENST00000497722 NEU4Q8WWR8 484 aaPredicted RBP4.51□□□□□ -1.69
PSPC1-205ENST00000497722 CLIP3Q96DZ5 547 aa4.51□□□□□ -1.69
PSPC1-205ENST00000497722 CEP89Q96ST8 783 aa4.51□□□□□ -1.69
PSPC1-205ENST00000497722 GPR87Q9BY21 358 aa4.51□□□□□ -1.69
PSPC1-205ENST00000497722 MSRAQ9UJ68 235 aa4.51□□□□□ -1.69
PSPC1-205ENST00000497722 RCAN3Q9UKA8 241 aa4.51□□□□□ -1.69
PSPC1-205ENST00000497722 hCG_2014768A0A024R1R8 64 aa4.5□□□□□ -1.69
PSPC1-205ENST00000497722 PRSS38A1L453 326 aa4.5□□□□□ -1.69
PSPC1-205ENST00000497722 HOXA3O43365 443 aaPredicted RBP4.5□□□□□ -1.69
PSPC1-205ENST00000497722 LMO1P25800 156 aa4.5□□□□□ -1.69
PSPC1-205ENST00000497722 ZFP36P26651 326 aaKnown RBP4.5□□□□□ -1.69
PSPC1-205ENST00000497722 ADCYAP1R1P41586 468 aa4.5□□□□□ -1.69
PSPC1-205ENST00000497722 LSSP48449 732 aa4.5□□□□□ -1.69
PSPC1-205ENST00000497722 GPR15P49685 360 aa4.5□□□□□ -1.69
PSPC1-205ENST00000497722 INHBCP55103 352 aa4.5□□□□□ -1.69
PSPC1-205ENST00000497722 COL10A1Q03692 680 aa4.5□□□□□ -1.69
PSPC1-205ENST00000497722 CNGB1Q14028 1251 aaPredicted RBP4.5□□□□□ -1.69
PSPC1-205ENST00000497722 KRTAP15-1Q3LI76 137 aa4.5□□□□□ -1.69
PSPC1-205ENST00000497722 ATP13A4Q4VNC1 1196 aa4.5□□□□□ -1.69
PSPC1-205ENST00000497722 CCDC178Q5BJE1 867 aa4.5□□□□□ -1.69
PSPC1-205ENST00000497722 DCAF17Q5H9S7 520 aaPredicted RBP4.5□□□□□ -1.69
PSPC1-205ENST00000497722 RABL3Q5HYI8 236 aa4.5□□□□□ -1.69
PSPC1-205ENST00000497722 METTL24Q5JXM2 366 aa4.5□□□□□ -1.69
PSPC1-205ENST00000497722 KRT40Q6A162 431 aa4.5□□□□□ -1.69
PSPC1-205ENST00000497722 IQSEC1Q6DN90 963 aa4.5□□□□□ -1.69
PSPC1-205ENST00000497722 TAS1R1Q7RTX1 841 aa4.5□□□□□ -1.69
PSPC1-205ENST00000497722 KRT26Q7Z3Y9 468 aa4.5□□□□□ -1.69
PSPC1-205ENST00000497722 HDGFL2Q7Z4V5 671 aaPredicted RBP4.5□□□□□ -1.69
PSPC1-205ENST00000497722 APBB1IPQ7Z5R6 666 aaPredicted RBP4.5□□□□□ -1.69
PSPC1-205ENST00000497722 MRGPREQ86SM8 312 aa4.5□□□□□ -1.69
PSPC1-205ENST00000497722 GSPT2Q8IYD1 628 aaKnown RBP4.5□□□□□ -1.69
PSPC1-205ENST00000497722 CDYL2Q8N8U2 506 aa4.5□□□□□ -1.69
PSPC1-205ENST00000497722 ST8SIA2Q92186 375 aa4.5□□□□□ -1.69
PSPC1-205ENST00000497722 LENG9Q96B70 501 aa4.5□□□□□ -1.69
PSPC1-205ENST00000497722 UIMC1Q96RL1 719 aa4.5□□□□□ -1.69
PSPC1-205ENST00000497722 PDCD2LQ9BRP1 358 aa4.5□□□□□ -1.69
PSPC1-205ENST00000497722 IFT22Q9H7X7 185 aa4.5□□□□□ -1.69
PSPC1-205ENST00000497722 NUMBLQ9Y6R0 609 aa4.5□□□□□ -1.69
PSPC1-205ENST00000497722 PCSK5Q92824 1860 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms