RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 NUP88Q99567 741 aaPredicted RBP6.31□□□□□ -1.4
VPS36-206ENST00000497149 PNMA8BQ9ULN7 279 aaPredicted RBP6.31□□□□□ -1.4
VPS36-206ENST00000497149 RBM8AQ9Y5S9 174 aaKnown RBP6.31□□□□□ -1.4
VPS36-206ENST00000497149 B4GALT3O60512 393 aa6.3□□□□□ -1.4
VPS36-206ENST00000497149 TMEM127O75204 238 aa6.3□□□□□ -1.4
VPS36-206ENST00000497149 CTSSP25774 331 aa6.3□□□□□ -1.4
VPS36-206ENST00000497149 SLC16A1P53985 500 aa6.3□□□□□ -1.4
VPS36-206ENST00000497149 KIF23Q02241 960 aaPredicted RBP6.3□□□□□ -1.4
VPS36-206ENST00000497149 PPP3CAQ08209 521 aa6.3□□□□□ -1.4
VPS36-206ENST00000497149 C19orf54Q5BKX5 351 aa6.3□□□□□ -1.4
VPS36-206ENST00000497149 FAM102BQ5T8I3 360 aa6.3□□□□□ -1.4
VPS36-206ENST00000497149 NT5DC1Q5TFE4 455 aa6.3□□□□□ -1.4
VPS36-206ENST00000497149 ABHD15Q6UXT9 468 aa6.3□□□□□ -1.4
VPS36-206ENST00000497149 TPH2Q8IWU9 490 aa6.3□□□□□ -1.4
VPS36-206ENST00000497149 MIER2Q8N344 545 aa6.3□□□□□ -1.4
VPS36-206ENST00000497149 GPR156Q8NFN8 814 aa6.3□□□□□ -1.4
VPS36-206ENST00000497149 RIN2Q8WYP3 895 aaPredicted RBP6.3□□□□□ -1.4
VPS36-206ENST00000497149 ADI1Q9BV57 179 aa6.3□□□□□ -1.4
VPS36-206ENST00000497149 CSRNP2Q9H175 543 aa6.3□□□□□ -1.4
VPS36-206ENST00000497149 DMRT3Q9NQL9 472 aa6.3□□□□□ -1.4
VPS36-206ENST00000497149 RBM12Q9NTZ6 932 aaKnown RBP6.3□□□□□ -1.4
VPS36-206ENST00000497149 NOB1Q9ULX3 412 aaKnown RBP6.3□□□□□ -1.4
VPS36-206ENST00000497149 DNM3Q9UQ16 869 aa6.3□□□□□ -1.4
VPS36-206ENST00000497149 RPTORQ8N122 1335 aa6.29□□□□□ -1.4
VPS36-206ENST00000497149 ADAMTS20P59510 1910 aa6.29□□□□□ -1.4
VPS36-206ENST00000497149 TRIM13O60858 407 aa6.29□□□□□ -1.4
VPS36-206ENST00000497149 AKAP5P24588 427 aa6.29□□□□□ -1.4
VPS36-206ENST00000497149 CYP2C19P33261 490 aa6.29□□□□□ -1.4
VPS36-206ENST00000497149 WASP42768 502 aa6.29□□□□□ -1.4
VPS36-206ENST00000497149 KIR2DL3P43628 341 aa6.29□□□□□ -1.4
VPS36-206ENST00000497149 ADCY7P51828 1080 aa6.29□□□□□ -1.4
VPS36-206ENST00000497149 ATP2C1P98194 919 aaPredicted RBP6.29□□□□□ -1.4
VPS36-206ENST00000497149 HGFACQ04756 655 aa6.29□□□□□ -1.4
VPS36-206ENST00000497149 TCIRG1Q13488 830 aa6.29□□□□□ -1.4
VPS36-206ENST00000497149 NFYCQ13952 458 aa6.29□□□□□ -1.4
VPS36-206ENST00000497149 NXNQ6DKJ4 435 aa6.29□□□□□ -1.4
VPS36-206ENST00000497149 BORAQ6PGQ7 559 aa6.29□□□□□ -1.4
VPS36-206ENST00000497149 FAM180AQ6UWF9 173 aa6.29□□□□□ -1.4
VPS36-206ENST00000497149 SP8Q8IXZ3 490 aa6.29□□□□□ -1.4
VPS36-206ENST00000497149 TCEAL8Q8IYN2 117 aa6.29□□□□□ -1.4
VPS36-206ENST00000497149 MYO1HQ8N1T3 1032 aa6.29□□□□□ -1.4
VPS36-206ENST00000497149 MARCH10Q8NA82 808 aaPredicted RBP6.29□□□□□ -1.4
VPS36-206ENST00000497149 SYT8Q8NBV8 401 aa6.29□□□□□ -1.4
VPS36-206ENST00000497149 SNX33Q8WV41 574 aa6.29□□□□□ -1.4
VPS36-206ENST00000497149 NRG4Q8WWG1 115 aa6.29□□□□□ -1.4
VPS36-206ENST00000497149 SLC7A6OSQ96CW6 309 aaPredicted RBP6.29□□□□□ -1.4
VPS36-206ENST00000497149 SLC6A15Q9H2J7 730 aa6.29□□□□□ -1.4
VPS36-206ENST00000497149 C14orf93Q9H972 538 aaKnown RBP6.29□□□□□ -1.4
VPS36-206ENST00000497149 SERPINB13Q9UIV8 391 aa6.29□□□□□ -1.4
VPS36-206ENST00000497149 SLC4A7Q9Y6M7 1214 aa6.29□□□□□ -1.4
VPS36-206ENST00000497149 ARHGAP6O43182 974 aa6.28□□□□□ -1.4
VPS36-206ENST00000497149 PRPF3O43395 683 aaKnown RBP6.28□□□□□ -1.4
VPS36-206ENST00000497149 AKR1B10O60218 316 aa6.28□□□□□ -1.4
VPS36-206ENST00000497149 PRAMEF4O60810 478 aa6.28□□□□□ -1.4
VPS36-206ENST00000497149 ALDH1A2O94788 518 aa6.28□□□□□ -1.4
VPS36-206ENST00000497149 GTF2H3Q13889 308 aa6.28□□□□□ -1.4
VPS36-206ENST00000497149 ACAP1Q15027 740 aa6.28□□□□□ -1.4
VPS36-206ENST00000497149 NOMO1Q15155 1222 aa6.28□□□□□ -1.4
VPS36-206ENST00000497149 RNF151Q2KHN1 245 aa6.28□□□□□ -1.4
VPS36-206ENST00000497149 UAP1L1Q3KQV9 507 aa6.28□□□□□ -1.4
VPS36-206ENST00000497149 RRP12Q5JTH9 1297 aaKnown RBP6.28□□□□□ -1.4
VPS36-206ENST00000497149 CXorf57Q6NSI4 855 aaKnown RBP6.28□□□□□ -1.4
VPS36-206ENST00000497149 LGI4Q8N135 537 aa6.28□□□□□ -1.4
VPS36-206ENST00000497149 MSL3Q8N5Y2 521 aaKnown RBP6.28□□□□□ -1.4
VPS36-206ENST00000497149 OR14K1Q8NGZ2 314 aa6.28□□□□□ -1.4
VPS36-206ENST00000497149 KRTAP4-9Q9BYQ8 210 aa6.28□□□□□ -1.4
VPS36-206ENST00000497149 JADE2Q9NQC1 790 aa6.28□□□□□ -1.4
VPS36-206ENST00000497149 ING3Q9NXR8 418 aa6.28□□□□□ -1.4
VPS36-206ENST00000497149 SAP30BPQ9UHR5 308 aaKnown RBP6.28□□□□□ -1.4
VPS36-206ENST00000497149 INTUQ9ULD6 942 aa6.28□□□□□ -1.4
VPS36-206ENST00000497149 LIMCH1Q9UPQ0 1083 aa6.28□□□□□ -1.4
VPS36-206ENST00000497149 NR2E1Q9Y466 385 aa6.28□□□□□ -1.4
VPS36-206ENST00000497149 PHF2O75151 1096 aa6.27□□□□□ -1.41
VPS36-206ENST00000497149 TOX4O94842 621 aa6.27□□□□□ -1.41
VPS36-206ENST00000497149 POU2F2P09086 479 aa6.27□□□□□ -1.41
VPS36-206ENST00000497149 U2AF1L5P0DN76 240 aaPredicted RBP6.27□□□□□ -1.41
VPS36-206ENST00000497149 ZSCAN22P10073 491 aaPredicted RBP6.27□□□□□ -1.41
VPS36-206ENST00000497149 EDNRBP24530 442 aa6.27□□□□□ -1.41
VPS36-206ENST00000497149 BPIFB4P59827 614 aa6.27□□□□□ -1.41
VPS36-206ENST00000497149 U2AF1Q01081 240 aaKnown RBP eCLIP6.27□□□□□ -1.41
VPS36-206ENST00000497149 MGAT2Q10469 447 aa6.27□□□□□ -1.41
VPS36-206ENST00000497149 ZNF568Q3ZCX4 644 aa6.27□□□□□ -1.41
VPS36-206ENST00000497149 SIAH1Q8IUQ4 282 aa6.27□□□□□ -1.41
VPS36-206ENST00000497149 WDR75Q8IWA0 830 aaKnown RBP6.27□□□□□ -1.41
VPS36-206ENST00000497149 MAGEB6Q8N7X4 407 aa6.27□□□□□ -1.41
VPS36-206ENST00000497149 OR2I1PQ8NGU4 316 aa6.27□□□□□ -1.41
VPS36-206ENST00000497149 DPF2Q92785 391 aa6.27□□□□□ -1.41
VPS36-206ENST00000497149 AIFM3Q96NN9 605 aa6.27□□□□□ -1.41
VPS36-206ENST00000497149 USP40Q9NVE5 1235 aa6.27□□□□□ -1.41
VPS36-206ENST00000497149 IPPQ9Y573 584 aa6.27□□□□□ -1.41
VPS36-206ENST00000497149 CCDC154A6NI56 674 aa6.26□□□□□ -1.41
VPS36-206ENST00000497149 MTSS1O43312 755 aa6.26□□□□□ -1.41
VPS36-206ENST00000497149 HTRA2O43464 458 aaPredicted RBP6.26□□□□□ -1.41
VPS36-206ENST00000497149 CNOT4O95628 575 aaKnown RBP6.26□□□□□ -1.41
VPS36-206ENST00000497149 JUNP05412 331 aaKnown RBP6.26□□□□□ -1.41
VPS36-206ENST00000497149 VSIG10L2P0DP72 767 aa6.26□□□□□ -1.41
VPS36-206ENST00000497149 BMP7P18075 431 aa6.26□□□□□ -1.41
VPS36-206ENST00000497149 PDCP20941 246 aa6.26□□□□□ -1.41
VPS36-206ENST00000497149 LPOP22079 712 aaPredicted RBP6.26□□□□□ -1.41
VPS36-206ENST00000497149 ADSLP30566 484 aaPredicted RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms