RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 TEKQ02763 1124 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 PPIDQ08752 370 aaKnown RBP3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 BNIP1Q12981 228 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 SP140Q13342 867 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 NOL9Q5SY16 702 aaKnown RBP3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 SPATA1Q5VX52 437 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 SCARA3Q6AZY7 606 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 NXNQ6DKJ4 435 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 KIAA1211LQ6NV74 962 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 HIBCHQ6NVY1 386 aaPredicted RBP3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 SLC23A3Q6PIS1 610 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 GBP6Q6ZN66 633 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 FIBCD1Q8N539 461 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 ESX1Q8N693 406 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 TRIML2Q8N7C3 387 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 CCDC150Q8NCX0 1101 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 TRIM58Q8NG06 486 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 KIF18AQ8NI77 898 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 GPT2Q8TD30 523 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 AFAP1L1Q8TED9 768 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 FAM168AQ92567 244 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 SGCDQ92629 289 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 SLC35B4Q969S0 331 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 FBXL18Q96ME1 805 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 RBM14Q96PK6 669 aaKnown RBP3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 UQCC2Q9BRT2 126 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 NACAP1Q9BZK3 213 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 TRIM4Q9C037 500 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 SUCOQ9UBS9 1254 aaKnown RBP3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 STAP2Q9UGK3 403 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 MRPL11Q9Y3B7 192 aaKnown RBP3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 RNF114Q9Y508 228 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 LTBP4Q8N2S1 1624 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 NCAPD3P42695 1498 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 A0A1B0GUA9 196 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 EME2A4GXA9 379 aaPredicted RBP3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 GOLGA6L4A6NEF3 574 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 RTCAO00442 366 aaKnown RBP3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 POLR3GO15318 223 aaPredicted RBP3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 ENDOUP21128 410 aaKnown RBP3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 GNL1P36915 607 aaPredicted RBP3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 STT3AP46977 705 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 POLD2P49005 469 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 EIF6P56537 245 aaKnown RBP3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 AKAP17AQ02040 695 aaKnown RBP3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 LAPTM5Q13571 262 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 ZRSR1Q15695 479 aaKnown RBP3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 IMMTQ16891 758 aaKnown RBP3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 LRRC23Q53EV4 343 aaPredicted RBP3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 TEX35Q5T0J7 233 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 YOD1Q5VVQ6 348 aaPredicted RBP3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 MBLAC2Q68D91 279 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 SWSAP1Q6NVH7 229 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 CEP128Q6ZU80 1094 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 DGLUCYQ7Z3D6 616 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 NANOGNBQ7Z5D8 188 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 TMCO5AQ8N6Q1 288 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 USP38Q8NB14 1042 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 DTNBP1Q96EV8 351 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 CRBNQ96SW2 442 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 THUMPD2Q9BTF0 503 aaKnown RBP3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 G6PC3Q9BUM1 346 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 RNF32Q9H0A6 362 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 NSRP1Q9H0G5 558 aaKnown RBP3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 PAPOLBQ9NRJ5 636 aaKnown RBP3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 EPS15L1Q9UBC2 864 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 FBXO10Q9UK96 956 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 CTNND2Q9UQB3 1225 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 TRAF3IP3Q9Y228 551 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 TMED5Q9Y3A6 229 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 GPRASP1Q5JY77 1395 aa3.42□□□□□ -1.86
SNRNP48-202ENST00000496946 TNFRSF10CO14798 259 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 MGEA5O60502 916 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 TSPAN1O60635 241 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 RASGRP1O95267 797 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 SLC4A1P02730 911 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 CD3EP07766 207 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 HSPA8P11142 646 aaKnown RBP3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 DESP17661 470 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 CD247P20963 164 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 CYP7A1P22680 504 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 NCKAP1LP55160 1127 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 NFKB2Q00653 900 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 GUCY1B3Q02153 619 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 SNX1Q13596 522 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 TUBA3CQ13748 450 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 HLTFQ14527 1009 aaKnown RBP eCLIP3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 MLC1Q15049 377 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 LRRFIP1Q32MZ4 808 aaKnown RBP3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 ANKRD39Q53RE8 183 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 METTL24Q5JXM2 366 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 THOC7Q6I9Y2 204 aaKnown RBP3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 PLBD1Q6P4A8 553 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 C1orf228Q6PIY5 440 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 LVRNQ6Q4G3 990 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 VHLLQ6RSH7 139 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 TMCO3Q6UWJ1 677 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 C16orf86Q6ZW13 317 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 RUFY3Q7L099 469 aa3.41□□□□□ -1.86
SNRNP48-202ENST00000496946 ARHGAP22Q7Z5H3 698 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms