RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 CMTM4Q8IZR5 234 aa6.68□□□□□ -1.34
SNX13-211ENST00000496855 TGFBRAP1Q8WUH2 860 aa6.68□□□□□ -1.34
SNX13-211ENST00000496855 FAM89AQ96GI7 184 aa6.68□□□□□ -1.34
SNX13-211ENST00000496855 C1QTNF3-AMACRE9PGA6 284 aa6.67□□□□□ -1.34
SNX13-211ENST00000496855 K7ESF4 209 aa6.67□□□□□ -1.34
SNX13-211ENST00000496855 ERVK-21P61565 698 aa6.67□□□□□ -1.34
SNX13-211ENST00000496855 AMPD3Q01432 767 aa6.67□□□□□ -1.34
SNX13-211ENST00000496855 PRKD1Q15139 912 aaPredicted RBP6.67□□□□□ -1.34
SNX13-211ENST00000496855 FAM111BQ6SJ93 734 aa6.67□□□□□ -1.34
SNX13-211ENST00000496855 D2HGDHQ8N465 521 aa6.67□□□□□ -1.34
SNX13-211ENST00000496855 MPHOSPH9Q99550 1183 aa6.67□□□□□ -1.34
SNX13-211ENST00000496855 TCF25Q9BQ70 676 aa6.67□□□□□ -1.34
SNX13-211ENST00000496855 NCDNQ9UBB6 729 aa6.67□□□□□ -1.34
SNX13-211ENST00000496855 DPP7Q9UHL4 492 aa6.67□□□□□ -1.34
SNX13-211ENST00000496855 TESMINQ9Y4I5 508 aa6.67□□□□□ -1.34
SNX13-211ENST00000496855 MRPS9P82933 396 aaKnown RBP6.66□□□□□ -1.34
SNX13-211ENST00000496855 NECAB2Q7Z6G3 386 aa6.66□□□□□ -1.34
SNX13-211ENST00000496855 ZNF808Q8N4W9 903 aaPredicted RBP6.66□□□□□ -1.34
SNX13-211ENST00000496855 PUS7LQ9H0K6 701 aaKnown RBP6.66□□□□□ -1.34
SNX13-211ENST00000496855 QRSL1Q9H0R6 528 aaKnown RBP6.66□□□□□ -1.34
SNX13-211ENST00000496855 SLC5A4Q9NY91 659 aa6.66□□□□□ -1.34
SNX13-211ENST00000496855 SH3BP1Q9Y3L3 701 aa6.66□□□□□ -1.34
SNX13-211ENST00000496855 ANKRD62A6NC57 917 aa6.66□□□□□ -1.34
SNX13-211ENST00000496855 NRP1O14786 923 aa6.66□□□□□ -1.34
SNX13-211ENST00000496855 LTA4HP09960 611 aaKnown RBP6.66□□□□□ -1.34
SNX13-211ENST00000496855 GPR3P46089 330 aa6.66□□□□□ -1.34
SNX13-211ENST00000496855 NPEPPSP55786 919 aa6.66□□□□□ -1.34
SNX13-211ENST00000496855 MEF2AQ02078 507 aaPredicted RBP6.66□□□□□ -1.34
SNX13-211ENST00000496855 HHEXQ03014 270 aa6.66□□□□□ -1.34
SNX13-211ENST00000496855 UBE3CQ15386 1083 aa6.66□□□□□ -1.34
SNX13-211ENST00000496855 MSL3Q8N5Y2 521 aaKnown RBP6.66□□□□□ -1.34
SNX13-211ENST00000496855 AUTS2Q8WXX7 1259 aa6.66□□□□□ -1.34
SNX13-211ENST00000496855 BORCS6Q96GS4 357 aa6.66□□□□□ -1.34
SNX13-211ENST00000496855 KRTAP9-3Q9BYQ3 159 aa6.66□□□□□ -1.34
SNX13-211ENST00000496855 TMEM127O75204 238 aa6.65□□□□□ -1.35
SNX13-211ENST00000496855 MTHFD2P13995 350 aa6.65□□□□□ -1.35
SNX13-211ENST00000496855 WNT3AP56704 352 aa6.65□□□□□ -1.35
SNX13-211ENST00000496855 CDK17Q00537 523 aa6.65□□□□□ -1.35
SNX13-211ENST00000496855 MUM1Q2TAK8 710 aa6.65□□□□□ -1.35
SNX13-211ENST00000496855 KCNK18Q7Z418 384 aa6.65□□□□□ -1.35
SNX13-211ENST00000496855 SGMS1Q86VZ5 419 aa6.65□□□□□ -1.35
SNX13-211ENST00000496855 ANKRD13AQ8IZ07 590 aa6.65□□□□□ -1.35
SNX13-211ENST00000496855 CNTD1Q8N815 330 aa6.65□□□□□ -1.35
SNX13-211ENST00000496855 TSPEARQ8WU66 669 aa6.65□□□□□ -1.35
SNX13-211ENST00000496855 PAWRQ96IZ0 340 aaKnown RBP6.65□□□□□ -1.35
SNX13-211ENST00000496855 POLR3GLQ9BT43 218 aa6.65□□□□□ -1.35
SNX13-211ENST00000496855 TLR9Q9NR96 1032 aa6.65□□□□□ -1.35
SNX13-211ENST00000496855 MYRFQ9Y2G1 1151 aa6.65□□□□□ -1.35
SNX13-211ENST00000496855 INSRRP14616 1297 aa6.64□□□□□ -1.35
SNX13-211ENST00000496855 CDKN1CP49918 316 aaPredicted RBP6.64□□□□□ -1.35
SNX13-211ENST00000496855 ZXDCQ2QGD7 858 aaPredicted RBP6.64□□□□□ -1.35
SNX13-211ENST00000496855 TOR2AQ5JU69 321 aa6.64□□□□□ -1.35
SNX13-211ENST00000496855 SPDYAQ5MJ70 313 aa6.64□□□□□ -1.35
SNX13-211ENST00000496855 SPTY2D1Q68D10 685 aaPredicted RBP6.64□□□□□ -1.35
SNX13-211ENST00000496855 SH3RF3Q8TEJ3 882 aaPredicted RBP6.64□□□□□ -1.35
SNX13-211ENST00000496855 ARL8AQ96BM9 186 aa6.64□□□□□ -1.35
SNX13-211ENST00000496855 MENTQ9BUN1 341 aa6.64□□□□□ -1.35
SNX13-211ENST00000496855 TRIM8Q9BZR9 551 aa6.64□□□□□ -1.35
SNX13-211ENST00000496855 ENKD1Q9H0I2 346 aa6.64□□□□□ -1.35
SNX13-211ENST00000496855 CCM2LQ9NUG4 571 aaPredicted RBP6.64□□□□□ -1.35
SNX13-211ENST00000496855 WASHC2AQ641Q2 1341 aa6.64□□□□□ -1.35
SNX13-211ENST00000496855 CAPN14A8MX76 684 aa6.63□□□□□ -1.35
SNX13-211ENST00000496855 PRAMEF4O60810 478 aa6.63□□□□□ -1.35
SNX13-211ENST00000496855 HIBADHP31937 336 aaKnown RBP6.63□□□□□ -1.35
SNX13-211ENST00000496855 CASRP41180 1078 aa6.63□□□□□ -1.35
SNX13-211ENST00000496855 SRSF2Q01130 221 aaKnown RBP6.63□□□□□ -1.35
SNX13-211ENST00000496855 KLF1Q13351 362 aaPredicted RBP6.63□□□□□ -1.35
SNX13-211ENST00000496855 C19orf54Q5BKX5 351 aa6.63□□□□□ -1.35
SNX13-211ENST00000496855 FKBP15Q5T1M5 1219 aa6.63□□□□□ -1.35
SNX13-211ENST00000496855 MFSD5Q6N075 450 aa6.63□□□□□ -1.35
SNX13-211ENST00000496855 ABHD15Q6UXT9 468 aa6.63□□□□□ -1.35
SNX13-211ENST00000496855 DBX2Q6ZNG2 339 aa6.63□□□□□ -1.35
SNX13-211ENST00000496855 ANKRD35Q8N283 1001 aa6.63□□□□□ -1.35
SNX13-211ENST00000496855 OR5M3Q8NGP4 307 aa6.63□□□□□ -1.35
SNX13-211ENST00000496855 SNX33Q8WV41 574 aa6.63□□□□□ -1.35
SNX13-211ENST00000496855 ZNF512Q96ME7 567 aaPredicted RBP6.63□□□□□ -1.35
SNX13-211ENST00000496855 IFT122Q9HBG6 1241 aa6.63□□□□□ -1.35
SNX13-211ENST00000496855 DNAJC28Q9NX36 388 aa6.63□□□□□ -1.35
SNX13-211ENST00000496855 COL4A3BPQ9Y5P4 624 aa6.63□□□□□ -1.35
SNX13-211ENST00000496855 CTSSP25774 331 aa6.62□□□□□ -1.35
SNX13-211ENST00000496855 CCT2P78371 535 aaKnown RBP6.62□□□□□ -1.35
SNX13-211ENST00000496855 DUSP2Q05923 314 aa6.62□□□□□ -1.35
SNX13-211ENST00000496855 ELAVL1Q15717 326 aaKnown RBP6.62□□□□□ -1.35
SNX13-211ENST00000496855 BTNL9Q6UXG8 535 aa6.62□□□□□ -1.35
SNX13-211ENST00000496855 SPRED1Q7Z699 444 aa6.62□□□□□ -1.35
SNX13-211ENST00000496855 PRPF38AQ8NAV1 312 aaKnown RBP6.62□□□□□ -1.35
SNX13-211ENST00000496855 GLB1L3Q8NCI6 653 aaPredicted RBP6.62□□□□□ -1.35
SNX13-211ENST00000496855 MIEF2Q96C03 454 aa6.62□□□□□ -1.35
SNX13-211ENST00000496855 KRTAP4-9Q9BYQ8 210 aa6.62□□□□□ -1.35
SNX13-211ENST00000496855 PCDH12Q9NPG4 1184 aa6.62□□□□□ -1.35
SNX13-211ENST00000496855 HECAQ9UBI9 543 aaPredicted RBP6.62□□□□□ -1.35
SNX13-211ENST00000496855 CYP27B1O15528 508 aa6.61□□□□□ -1.35
SNX13-211ENST00000496855 STC2O76061 302 aa6.61□□□□□ -1.35
SNX13-211ENST00000496855 GYPEP15421 78 aa6.61□□□□□ -1.35
SNX13-211ENST00000496855 GUCY2FP51841 1108 aa6.61□□□□□ -1.35
SNX13-211ENST00000496855 ADRM1Q16186 407 aa6.61□□□□□ -1.35
SNX13-211ENST00000496855 GGNQ86UU5 652 aa6.61□□□□□ -1.35
SNX13-211ENST00000496855 FATE1Q969F0 183 aa6.61□□□□□ -1.35
SNX13-211ENST00000496855 GIT1Q9Y2X7 761 aa6.61□□□□□ -1.35
SNX13-211ENST00000496855 RPTORQ8N122 1335 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms