RNA–Protein interactions for RNA: ENST00000496527.1

CHRD-217, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 588 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-217ENST00000496527 RNF19AQ9NV58 838 aa25.09■■□□□ 1.61
CHRD-217ENST00000496527 ZDHHC9Q9Y397 364 aa25.09■■□□□ 1.61
CHRD-217ENST00000496527 SFI1A8K8P3 1242 aa25.08■■□□□ 1.61
CHRD-217ENST00000496527 B4GALT5O43286 388 aa25.08■■□□□ 1.61
CHRD-217ENST00000496527 NPTX2P47972 431 aa25.08■■□□□ 1.61
CHRD-217ENST00000496527 FAM187BQ17R55 369 aa25.08■■□□□ 1.61
CHRD-217ENST00000496527 TMEM132AQ24JP5 1023 aa25.08■■□□□ 1.61
CHRD-217ENST00000496527 UBXN11Q5T124 520 aa25.08■■□□□ 1.61
CHRD-217ENST00000496527 SPOUT1Q5T280 376 aaKnown RBP25.08■■□□□ 1.61
CHRD-217ENST00000496527 MAFAQ8NHW3 353 aaPredicted RBP25.08■■□□□ 1.61
CHRD-217ENST00000496527 CASD1Q96PB1 797 aa25.08■■□□□ 1.61
CHRD-217ENST00000496527 STK17AQ9UEE5 414 aa25.08■■□□□ 1.61
CHRD-217ENST00000496527 KCNG1Q9UIX4 513 aa25.08■■□□□ 1.61
CHRD-217ENST00000496527 NPHP3-ACAD11A0A0J9YXS1 232 aa25.07■■□□□ 1.6
CHRD-217ENST00000496527 LPXNO60711 386 aa25.07■■□□□ 1.6
CHRD-217ENST00000496527 CUTAO60888 179 aa25.07■■□□□ 1.6
CHRD-217ENST00000496527 PRKCBP05771 671 aa25.07■■□□□ 1.6
CHRD-217ENST00000496527 KRT18P05783 430 aaKnown RBP25.07■■□□□ 1.6
CHRD-217ENST00000496527 RB1P06400 928 aa25.07■■□□□ 1.6
CHRD-217ENST00000496527 LINC00271P0C7V0 271 aa25.07■■□□□ 1.6
CHRD-217ENST00000496527 LONRF3Q496Y0 759 aa25.07■■□□□ 1.6
CHRD-217ENST00000496527 ARSHQ5FYA8 562 aa25.07■■□□□ 1.6
CHRD-217ENST00000496527 CLLU1OSQ5K130 101 aa25.07■■□□□ 1.6
CHRD-217ENST00000496527 CCDC73Q6ZRK6 1079 aa25.07■■□□□ 1.6
CHRD-217ENST00000496527 CNNM3Q8NE01 707 aa25.07■■□□□ 1.6
CHRD-217ENST00000496527 HELQQ8TDG4 1101 aa25.07■■□□□ 1.6
CHRD-217ENST00000496527 LPPQ93052 612 aa25.07■■□□□ 1.6
CHRD-217ENST00000496527 KMT5AQ9NQR1 393 aa25.07■■□□□ 1.6
CHRD-217ENST00000496527 TYW1Q9NV66 732 aaKnown RBP25.07■■□□□ 1.6
CHRD-217ENST00000496527 ATP6V1DQ9Y5K8 247 aa25.07■■□□□ 1.6
CHRD-217ENST00000496527 C5orf67F2Z3F1 127 aa25.06■■□□□ 1.6
CHRD-217ENST00000496527 H3BNC9 293 aa25.06■■□□□ 1.6
CHRD-217ENST00000496527 ACKR2O00590 384 aa25.06■■□□□ 1.6
CHRD-217ENST00000496527 PLS3P13797 630 aa25.06■■□□□ 1.6
CHRD-217ENST00000496527 GPM6BQ13491 265 aa25.06■■□□□ 1.6
CHRD-217ENST00000496527 PRPF4BQ13523 1007 aaKnown RBP25.06■■□□□ 1.6
CHRD-217ENST00000496527 MRPL10Q7Z7H8 261 aaKnown RBP25.06■■□□□ 1.6
CHRD-217ENST00000496527 C11orf84Q9BUA3 381 aaPredicted RBP25.06■■□□□ 1.6
CHRD-217ENST00000496527 PLVAPQ9BX97 442 aa25.06■■□□□ 1.6
CHRD-217ENST00000496527 EIF2AQ9BY44 585 aaKnown RBP25.06■■□□□ 1.6
CHRD-217ENST00000496527 PANK2Q9BZ23 570 aa25.06■■□□□ 1.6
CHRD-217ENST00000496527 TRIM6Q9C030 488 aaPredicted RBP25.06■■□□□ 1.6
CHRD-217ENST00000496527 CCDC113Q9H0I3 377 aa25.06■■□□□ 1.6
CHRD-217ENST00000496527 AAASQ9NRG9 546 aa25.06■■□□□ 1.6
CHRD-217ENST00000496527 ODF2LQ9ULJ1 636 aa25.06■■□□□ 1.6
CHRD-217ENST00000496527 RBM19Q9Y4C8 960 aaKnown RBP25.06■■□□□ 1.6
CHRD-217ENST00000496527 A0A1B0GUA9 196 aa25.05■■□□□ 1.6
CHRD-217ENST00000496527 K7ERI5 159 aa25.05■■□□□ 1.6
CHRD-217ENST00000496527 POU3F3P20264 500 aaPredicted RBP25.05■■□□□ 1.6
CHRD-217ENST00000496527 ME1P48163 572 aa25.05■■□□□ 1.6
CHRD-217ENST00000496527 SMTNP53814 917 aa25.05■■□□□ 1.6
CHRD-217ENST00000496527 CACNB1Q02641 598 aaPredicted RBP25.05■■□□□ 1.6
CHRD-217ENST00000496527 GLB1LQ6UWU2 654 aa25.05■■□□□ 1.6
CHRD-217ENST00000496527 LRRC43Q8N309 656 aa25.05■■□□□ 1.6
CHRD-217ENST00000496527 RSPH1Q8WYR4 309 aa25.05■■□□□ 1.6
CHRD-217ENST00000496527 MTCH2Q9Y6C9 303 aa25.05■■□□□ 1.6
CHRD-217ENST00000496527 CNTNAP2Q9UHC6 1331 aa25.05■■□□□ 1.6
CHRD-217ENST00000496527 FNDC1Q4ZHG4 1894 aaPredicted RBP25.04■■□□□ 1.6
CHRD-217ENST00000496527 NCLP19338 710 aaKnown RBP25.04■■□□□ 1.6
CHRD-217ENST00000496527 STAT6P42226 847 aa25.04■■□□□ 1.6
CHRD-217ENST00000496527 SLC27A1Q6PCB7 646 aa25.04■■□□□ 1.6
CHRD-217ENST00000496527 CDR2LQ86X02 465 aaPredicted RBP25.04■■□□□ 1.6
CHRD-217ENST00000496527 MICALL1Q8N3F8 863 aa25.04■■□□□ 1.6
CHRD-217ENST00000496527 SPIRE2Q8WWL2 714 aa25.04■■□□□ 1.6
CHRD-217ENST00000496527 REEP2Q9BRK0 252 aa25.04■■□□□ 1.6
CHRD-217ENST00000496527 NTPCRQ9BSD7 190 aaKnown RBP25.04■■□□□ 1.6
CHRD-217ENST00000496527 MRPL9Q9BYD2 267 aaKnown RBP25.04■■□□□ 1.6
CHRD-217ENST00000496527 TMEM134Q9H6X4 195 aa25.04■■□□□ 1.6
CHRD-217ENST00000496527 LMCD1Q9NZU5 365 aa25.04■■□□□ 1.6
CHRD-217ENST00000496527 LARSQ9P2J5 1176 aaKnown RBP25.04■■□□□ 1.6
CHRD-217ENST00000496527 RCOR1Q9UKL0 485 aa25.04■■□□□ 1.6
CHRD-217ENST00000496527 IPPQ9Y573 584 aa25.04■■□□□ 1.6
CHRD-217ENST00000496527 PCDHB12Q9Y5F1 795 aa25.04■■□□□ 1.6
CHRD-217ENST00000496527 PHLPP2Q6ZVD8 1323 aa25.04■■□□□ 1.6
CHRD-217ENST00000496527 CDH23Q9H251 3354 aa25.04■■□□□ 1.6
CHRD-217ENST00000496527 RALGAPA2Q2PPJ7 1873 aa25.03■■□□□ 1.6
CHRD-217ENST00000496527 NLRC5Q86WI3 1866 aa25.03■■□□□ 1.6
CHRD-217ENST00000496527 MEIS3P2A8K0S8 358 aa25.03■■□□□ 1.6
CHRD-217ENST00000496527 N4BP3O15049 544 aa25.03■■□□□ 1.6
CHRD-217ENST00000496527 SLC16A4O15374 487 aa25.03■■□□□ 1.6
CHRD-217ENST00000496527 FAM13AO94988 1023 aa25.03■■□□□ 1.6
CHRD-217ENST00000496527 NPTXRO95502 500 aa25.03■■□□□ 1.6
CHRD-217ENST00000496527 ITGA4P13612 1032 aa25.03■■□□□ 1.6
CHRD-217ENST00000496527 KRT85P78386 507 aa25.03■■□□□ 1.6
CHRD-217ENST00000496527 NAALADL2Q58DX5 795 aa25.03■■□□□ 1.6
CHRD-217ENST00000496527 AGMOQ6ZNB7 445 aa25.03■■□□□ 1.6
CHRD-217ENST00000496527 SV2BQ7L1I2 683 aa25.03■■□□□ 1.6
CHRD-217ENST00000496527 HACE1Q8IYU2 909 aa25.03■■□□□ 1.6
CHRD-217ENST00000496527 PDILTQ8N807 584 aa25.03■■□□□ 1.6
CHRD-217ENST00000496527 SMG8Q8ND04 991 aaKnown RBP25.03■■□□□ 1.6
CHRD-217ENST00000496527 PPM1EQ8WY54 764 aa25.03■■□□□ 1.6
CHRD-217ENST00000496527 CWH43Q9H720 699 aa25.03■■□□□ 1.6
CHRD-217ENST00000496527 ARHGAP28Q9P2N2 729 aa25.03■■□□□ 1.6
CHRD-217ENST00000496527 PCDHA7Q9UN72 937 aa25.03■■□□□ 1.6
CHRD-217ENST00000496527 CHD7Q9P2D1 2997 aa25.03■■□□□ 1.6
CHRD-217ENST00000496527 TTLL13PA6NNM8 815 aa25.02■■□□□ 1.6
CHRD-217ENST00000496527 OFD1O75665 1012 aa25.02■■□□□ 1.6
CHRD-217ENST00000496527 LAG3P18627 525 aa25.02■■□□□ 1.6
CHRD-217ENST00000496527 GIT2Q14161 759 aa25.02■■□□□ 1.6
CHRD-217ENST00000496527 PTPROQ16827 1216 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms