RNA–Protein interactions for RNA: ENST00000496222.1

TRIM59-207, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-207ENST00000496222 LAG3P18627 525 aa13.65□□□□□ -0.22
TRIM59-207ENST00000496222 NCLP19338 710 aaKnown RBP13.65□□□□□ -0.22
TRIM59-207ENST00000496222 PDCP20941 246 aa13.65□□□□□ -0.22
TRIM59-207ENST00000496222 GTF2F1P35269 517 aaKnown RBP eCLIP13.65□□□□□ -0.229e-6■□□□□ 8.8
TRIM59-207ENST00000496222 LTBRP36941 435 aa13.65□□□□□ -0.22
TRIM59-207ENST00000496222 PLCB3Q01970 1234 aa13.65□□□□□ -0.22
TRIM59-207ENST00000496222 GRIN1Q05586 938 aa13.65□□□□□ -0.22
TRIM59-207ENST00000496222 MAPK7Q13164 816 aa13.65□□□□□ -0.22
TRIM59-207ENST00000496222 PTPAQ15257 358 aa13.65□□□□□ -0.22
TRIM59-207ENST00000496222 FAM187BQ17R55 369 aa13.65□□□□□ -0.22
TRIM59-207ENST00000496222 TMEM119Q4V9L6 283 aa13.65□□□□□ -0.22
TRIM59-207ENST00000496222 RINT1Q6NUQ1 792 aa13.65□□□□□ -0.22
TRIM59-207ENST00000496222 KCNT2Q6UVM3 1135 aa13.65□□□□□ -0.22
TRIM59-207ENST00000496222 C1orf186Q6ZWK4 172 aa13.65□□□□□ -0.22
TRIM59-207ENST00000496222 LRRC15Q8TF66 581 aa13.65□□□□□ -0.22
TRIM59-207ENST00000496222 CCDC51Q96ER9 411 aa13.65□□□□□ -0.22
TRIM59-207ENST00000496222 RUSC1Q9BVN2 902 aa13.65□□□□□ -0.22
TRIM59-207ENST00000496222 CSRNP2Q9H175 543 aa13.65□□□□□ -0.22
TRIM59-207ENST00000496222 AAASQ9NRG9 546 aa13.65□□□□□ -0.22
TRIM59-207ENST00000496222 TBC1D13Q9NVG8 400 aa13.65□□□□□ -0.22
TRIM59-207ENST00000496222 DNM3Q9UQ16 869 aa13.65□□□□□ -0.22
TRIM59-207ENST00000496222 MTMR6Q9Y217 621 aa13.65□□□□□ -0.22
TRIM59-207ENST00000496222 PCDHGC5Q9Y5F6 944 aa13.65□□□□□ -0.22
TRIM59-207ENST00000496222 CLIC4Q9Y696 253 aa13.65□□□□□ -0.22
TRIM59-207ENST00000496222 NCOR1O75376 2440 aa13.64□□□□□ -0.23
TRIM59-207ENST00000496222 LRRIQ4A6NIV6 560 aa13.64□□□□□ -0.23
TRIM59-207ENST00000496222 FSCN2O14926 492 aa13.64□□□□□ -0.23
TRIM59-207ENST00000496222 INPPL1O15357 1258 aa13.64□□□□□ -0.23
TRIM59-207ENST00000496222 ERLIN2O94905 339 aa13.64□□□□□ -0.23
TRIM59-207ENST00000496222 ERVFC1P60507 584 aa13.64□□□□□ -0.23
TRIM59-207ENST00000496222 UBE3AQ05086 875 aa13.64□□□□□ -0.23
TRIM59-207ENST00000496222 SF3A1Q15459 793 aaKnown RBP13.64□□□□□ -0.23
TRIM59-207ENST00000496222 CSPP1Q1MSJ5 1256 aa13.64□□□□□ -0.23
TRIM59-207ENST00000496222 NOMO2Q5JPE7 1267 aa13.64□□□□□ -0.23
TRIM59-207ENST00000496222 SPOUT1Q5T280 376 aaKnown RBP13.64□□□□□ -0.23
TRIM59-207ENST00000496222 FAM173BQ6P4H8 233 aa13.64□□□□□ -0.23
TRIM59-207ENST00000496222 NOTUMQ6P988 496 aa13.64□□□□□ -0.23
TRIM59-207ENST00000496222 ADGRD2Q7Z7M1 963 aa13.64□□□□□ -0.23
TRIM59-207ENST00000496222 TMEM173Q86WV6 379 aaPredicted RBP13.64□□□□□ -0.23
TRIM59-207ENST00000496222 ABI1Q8IZP0 508 aa13.64□□□□□ -0.23
TRIM59-207ENST00000496222 SLC39A11Q8N1S5 342 aa13.64□□□□□ -0.23
TRIM59-207ENST00000496222 RSPH1Q8WYR4 309 aa13.64□□□□□ -0.23
TRIM59-207ENST00000496222 PABPC5Q96DU9 382 aaKnown RBP13.64□□□□□ -0.23
TRIM59-207ENST00000496222 NRDE2Q9H7Z3 1164 aa13.64□□□□□ -0.23
TRIM59-207ENST00000496222 FOXD4L1Q9NU39 408 aa13.64□□□□□ -0.23
TRIM59-207ENST00000496222 LZTS1Q9Y250 596 aa13.64□□□□□ -0.23
TRIM59-207ENST00000496222 IPPQ9Y573 584 aa13.64□□□□□ -0.23
TRIM59-207ENST00000496222 NAMPTP43490 491 aa13.63□□□□□ -0.23
TRIM59-207ENST00000496222 SLC12A3P55017 1021 aa13.63□□□□□ -0.23
TRIM59-207ENST00000496222 BCAR1P56945 870 aa13.63□□□□□ -0.23
TRIM59-207ENST00000496222 LEXMQ3ZCV2 418 aa13.63□□□□□ -0.23
TRIM59-207ENST00000496222 GLB1LQ6UWU2 654 aa13.63□□□□□ -0.23
TRIM59-207ENST00000496222 CDR2LQ86X02 465 aaPredicted RBP13.63□□□□□ -0.23
TRIM59-207ENST00000496222 ZNF280BQ86YH2 543 aa13.63□□□□□ -0.23
TRIM59-207ENST00000496222 THNSL1Q8IYQ7 743 aa13.63□□□□□ -0.23
TRIM59-207ENST00000496222 KCTD17Q8N5Z5 321 aa13.63□□□□□ -0.23
TRIM59-207ENST00000496222 SYT2Q8N9I0 419 aaPredicted RBP13.63□□□□□ -0.23
TRIM59-207ENST00000496222 GSTCDQ8NEC7 633 aa13.63□□□□□ -0.23
TRIM59-207ENST00000496222 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.63□□□□□ -0.23
TRIM59-207ENST00000496222 MRPS27Q92552 414 aaKnown RBP13.63□□□□□ -0.23
TRIM59-207ENST00000496222 KIFAP3Q92845 792 aa13.63□□□□□ -0.23
TRIM59-207ENST00000496222 PGBD4Q96DM1 585 aa13.63□□□□□ -0.23
TRIM59-207ENST00000496222 PRIMPOLQ96LW4 560 aa13.63□□□□□ -0.23
TRIM59-207ENST00000496222 AK8Q96MA6 479 aa13.63□□□□□ -0.23
TRIM59-207ENST00000496222 ZNF558Q96NG5 402 aa13.63□□□□□ -0.23
TRIM59-207ENST00000496222 KIFC3Q9BVG8 833 aa13.63□□□□□ -0.23
TRIM59-207ENST00000496222 MRPL9Q9BYD2 267 aaKnown RBP13.63□□□□□ -0.23
TRIM59-207ENST00000496222 PRMT7Q9NVM4 692 aaPredicted RBP13.63□□□□□ -0.23
TRIM59-207ENST00000496222 USP20Q9Y2K6 914 aa13.63□□□□□ -0.23
TRIM59-207ENST00000496222 HES2Q9Y543 173 aa13.63□□□□□ -0.23
TRIM59-207ENST00000496222 CNTNAP2Q9UHC6 1331 aa13.63□□□□□ -0.23
TRIM59-207ENST00000496222 TRIOO75962 3097 aa13.62□□□□□ -0.23
TRIM59-207ENST00000496222 SLC26A4O43511 780 aa13.62□□□□□ -0.23
TRIM59-207ENST00000496222 HIP1RO75146 1068 aa13.62□□□□□ -0.23
TRIM59-207ENST00000496222 DDHD2O94830 711 aa13.62□□□□□ -0.23
TRIM59-207ENST00000496222 CSPG5O95196 566 aa13.62□□□□□ -0.23
TRIM59-207ENST00000496222 BMP15O95972 392 aa13.62□□□□□ -0.23
TRIM59-207ENST00000496222 GALTP07902 379 aa13.62□□□□□ -0.23
TRIM59-207ENST00000496222 GUCY2CP25092 1073 aa13.62□□□□□ -0.23
TRIM59-207ENST00000496222 DLX2Q07687 328 aaPredicted RBP13.62□□□□□ -0.23
TRIM59-207ENST00000496222 ADAM15Q13444 863 aa13.62□□□□□ -0.23
TRIM59-207ENST00000496222 AAK1Q2M2I8 961 aa13.62□□□□□ -0.23
TRIM59-207ENST00000496222 ARSHQ5FYA8 562 aa13.62□□□□□ -0.23
TRIM59-207ENST00000496222 SLC27A1Q6PCB7 646 aa13.62□□□□□ -0.23
TRIM59-207ENST00000496222 TAS1R3Q7RTX0 852 aa13.62□□□□□ -0.23
TRIM59-207ENST00000496222 CNNM3Q8NE01 707 aa13.62□□□□□ -0.23
TRIM59-207ENST00000496222 BCL7CQ8WUZ0 217 aaPredicted RBP13.62□□□□□ -0.23
TRIM59-207ENST00000496222 SYMPKQ92797 1274 aaKnown RBP13.62□□□□□ -0.23
TRIM59-207ENST00000496222 C2orf40Q9H1Z8 148 aa13.62□□□□□ -0.23
TRIM59-207ENST00000496222 NXF3Q9H4D5 531 aaKnown RBP13.62□□□□□ -0.23
TRIM59-207ENST00000496222 PDZD7Q9H5P4 517 aa13.62□□□□□ -0.23
TRIM59-207ENST00000496222 RSAD1Q9HA92 442 aa13.62□□□□□ -0.23
TRIM59-207ENST00000496222 TLR9Q9NR96 1032 aa13.62□□□□□ -0.23
TRIM59-207ENST00000496222 BLOC1S4Q9NUP1 217 aa13.62□□□□□ -0.23
TRIM59-207ENST00000496222 MIOSQ9NXC5 875 aa13.62□□□□□ -0.23
TRIM59-207ENST00000496222 SPG21Q9NZD8 308 aa13.62□□□□□ -0.23
TRIM59-207ENST00000496222 DNAJB4Q9UDY4 337 aa13.62□□□□□ -0.23
TRIM59-207ENST00000496222 ARL5CA6NH57 179 aa13.61□□□□□ -0.23
TRIM59-207ENST00000496222 NT5C1B-RDH14C9J2C7 533 aa13.61□□□□□ -0.23
TRIM59-207ENST00000496222 ACKR2O00590 384 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms