RNA–Protein interactions for RNA: ENST00000496172.5

ERGIC3-219, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 781 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-219ENST00000496172 PHF7Q9BWX1 381 aaPredicted RBP11.66□□□□□ -0.54
ERGIC3-219ENST00000496172 RAB34Q9BZG1 259 aa11.66□□□□□ -0.54
ERGIC3-219ENST00000496172 TYW1Q9NV66 732 aaKnown RBP11.66□□□□□ -0.54
ERGIC3-219ENST00000496172 CLEC1BQ9P126 229 aa11.66□□□□□ -0.54
ERGIC3-219ENST00000496172 SMC3Q9UQE7 1217 aa11.66□□□□□ -0.54
ERGIC3-219ENST00000496172 PIN4Q9Y237 131 aaKnown RBP11.66□□□□□ -0.54
ERGIC3-219ENST00000496172 STK24Q9Y6E0 443 aa11.66□□□□□ -0.54
ERGIC3-219ENST00000496172 H0Y858 1186 aa11.65□□□□□ -0.54
ERGIC3-219ENST00000496172 ERLIN2O94905 339 aa11.65□□□□□ -0.54
ERGIC3-219ENST00000496172 ITGB1P05556 798 aa11.65□□□□□ -0.54
ERGIC3-219ENST00000496172 ATF7P17544 494 aaPredicted RBP11.65□□□□□ -0.54
ERGIC3-219ENST00000496172 GJB2P29033 226 aa11.65□□□□□ -0.54
ERGIC3-219ENST00000496172 GTF2F1P35269 517 aaKnown RBP eCLIP11.65□□□□□ -0.54
ERGIC3-219ENST00000496172 RARRES1P49788 294 aa11.65□□□□□ -0.54
ERGIC3-219ENST00000496172 RAB27AP51159 221 aa11.65□□□□□ -0.54
ERGIC3-219ENST00000496172 UBE3AQ05086 875 aa11.65□□□□□ -0.54
ERGIC3-219ENST00000496172 CAMK1Q14012 370 aa11.65□□□□□ -0.54
ERGIC3-219ENST00000496172 PCBP1Q15365 356 aaKnown RBP eCLIP11.65□□□□□ -0.54
ERGIC3-219ENST00000496172 PTPN21Q16825 1174 aa11.65□□□□□ -0.54
ERGIC3-219ENST00000496172 CATSPER3Q86XQ3 398 aa11.65□□□□□ -0.54
ERGIC3-219ENST00000496172 THNSL1Q8IYQ7 743 aa11.65□□□□□ -0.54
ERGIC3-219ENST00000496172 LRRC43Q8N309 656 aa11.65□□□□□ -0.54
ERGIC3-219ENST00000496172 RNF149Q8NC42 400 aa11.65□□□□□ -0.54
ERGIC3-219ENST00000496172 PIGOQ8TEQ8 1089 aa11.65□□□□□ -0.54
ERGIC3-219ENST00000496172 PGBD4Q96DM1 585 aa11.65□□□□□ -0.54
ERGIC3-219ENST00000496172 TRAIPQ9BWF2 469 aa11.65□□□□□ -0.54
ERGIC3-219ENST00000496172 MRPL9Q9BYD2 267 aaKnown RBP11.65□□□□□ -0.54
ERGIC3-219ENST00000496172 IFT122Q9HBG6 1241 aa11.65□□□□□ -0.54
ERGIC3-219ENST00000496172 TLR9Q9NR96 1032 aa11.65□□□□□ -0.54
ERGIC3-219ENST00000496172 NCOR2Q9Y618 2525 aa11.65□□□□□ -0.54
ERGIC3-219ENST00000496172 DNAH14Q0VDD8 3507 aa11.65□□□□□ -0.54
ERGIC3-219ENST00000496172 LAD1O00515 517 aa11.64□□□□□ -0.55
ERGIC3-219ENST00000496172 CSPG5O95196 566 aa11.64□□□□□ -0.55
ERGIC3-219ENST00000496172 SPATA31C1P0DKV0 1188 aa11.64□□□□□ -0.55
ERGIC3-219ENST00000496172 RPA1P27694 616 aa11.64□□□□□ -0.55
ERGIC3-219ENST00000496172 FXR2P51116 673 aaKnown RBP eCLIP11.64□□□□□ -0.55
ERGIC3-219ENST00000496172 ZNF598Q86UK7 904 aaKnown RBP11.64□□□□□ -0.55
ERGIC3-219ENST00000496172 COLGALT1Q8NBJ5 622 aa11.64□□□□□ -0.55
ERGIC3-219ENST00000496172 MCPH1Q8NEM0 835 aa11.64□□□□□ -0.55
ERGIC3-219ENST00000496172 SPPL3Q8TCT6 385 aa11.64□□□□□ -0.55
ERGIC3-219ENST00000496172 MICAL1Q8TDZ2 1067 aa11.64□□□□□ -0.55
ERGIC3-219ENST00000496172 POF1BQ8WVV4 589 aa11.64□□□□□ -0.55
ERGIC3-219ENST00000496172 ZNF558Q96NG5 402 aa11.64□□□□□ -0.55
ERGIC3-219ENST00000496172 CASD1Q96PB1 797 aa11.64□□□□□ -0.55
ERGIC3-219ENST00000496172 AGPAT5Q9NUQ2 364 aa11.64□□□□□ -0.55
ERGIC3-219ENST00000496172 FAM105AQ9NUU6 356 aa11.64□□□□□ -0.55
ERGIC3-219ENST00000496172 LRWD1Q9UFC0 647 aa11.64□□□□□ -0.55
ERGIC3-219ENST00000496172 PUF60Q9UHX1 559 aaKnown RBP11.64□□□□□ -0.55
ERGIC3-219ENST00000496172 DBR1Q9UK59 544 aaKnown RBP11.64□□□□□ -0.55
ERGIC3-219ENST00000496172 USP15Q9Y4E8 981 aaPredicted RBP11.64□□□□□ -0.55
ERGIC3-219ENST00000496172 A0A087WWV3 80 aa11.63□□□□□ -0.55
ERGIC3-219ENST00000496172 FSD2A1L4K1 749 aa11.63□□□□□ -0.55
ERGIC3-219ENST00000496172 ARHGEF35A5YM69 484 aa11.63□□□□□ -0.55
ERGIC3-219ENST00000496172 CARNS1A5YM72 827 aa11.63□□□□□ -0.55
ERGIC3-219ENST00000496172 INO80B-WBP1J3KQ70 363 aa11.63□□□□□ -0.55
ERGIC3-219ENST00000496172 USO1O60763 962 aaKnown RBP11.63□□□□□ -0.55
ERGIC3-219ENST00000496172 MED24O75448 989 aa11.63□□□□□ -0.55
ERGIC3-219ENST00000496172 FGF18O76093 207 aa11.63□□□□□ -0.55
ERGIC3-219ENST00000496172 GLP2RO95838 553 aa11.63□□□□□ -0.55
ERGIC3-219ENST00000496172 MUTP22033 750 aa11.63□□□□□ -0.55
ERGIC3-219ENST00000496172 AXLP30530 894 aa11.63□□□□□ -0.55
ERGIC3-219ENST00000496172 PPM1AP35813 382 aa11.63□□□□□ -0.55
ERGIC3-219ENST00000496172 ARL2P36404 184 aa11.63□□□□□ -0.55
ERGIC3-219ENST00000496172 CCT6AP40227 531 aaKnown RBP11.63□□□□□ -0.55
ERGIC3-219ENST00000496172 PTENP60484 403 aa11.63□□□□□ -0.55
ERGIC3-219ENST00000496172 KRT17Q04695 432 aa11.63□□□□□ -0.55
ERGIC3-219ENST00000496172 POU5F1BQ06416 359 aa11.63□□□□□ -0.55
ERGIC3-219ENST00000496172 PTGDRQ13258 359 aa11.63□□□□□ -0.55
ERGIC3-219ENST00000496172 PDIA5Q14554 519 aa11.63□□□□□ -0.55
ERGIC3-219ENST00000496172 NBR1Q14596 966 aa11.63□□□□□ -0.55
ERGIC3-219ENST00000496172 RILPL1Q5EBL4 403 aa11.63□□□□□ -0.55
ERGIC3-219ENST00000496172 PDE12Q6L8Q7 609 aaKnown RBP11.63□□□□□ -0.55
ERGIC3-219ENST00000496172 GLB1LQ6UWU2 654 aa11.63□□□□□ -0.55
ERGIC3-219ENST00000496172 DTHD1Q6ZMT9 781 aa11.63□□□□□ -0.55
ERGIC3-219ENST00000496172 HELQQ8TDG4 1101 aa11.63□□□□□ -0.55
ERGIC3-219ENST00000496172 SUSD6Q92537 303 aa11.63□□□□□ -0.55
ERGIC3-219ENST00000496172 RIPOR3Q96MK2 946 aa11.63□□□□□ -0.55
ERGIC3-219ENST00000496172 POLR3FQ9H1D9 316 aaPredicted RBP11.63□□□□□ -0.55
ERGIC3-219ENST00000496172 IGFLR1Q9H665 355 aa11.63□□□□□ -0.55
ERGIC3-219ENST00000496172 CWH43Q9H720 699 aa11.63□□□□□ -0.55
ERGIC3-219ENST00000496172 XPNPEP1Q9NQW7 623 aa11.63□□□□□ -0.55
ERGIC3-219ENST00000496172 PCDHB2Q9Y5E7 798 aa11.63□□□□□ -0.55
ERGIC3-219ENST00000496172 TPRP12270 2363 aaKnown RBP11.63□□□□□ -0.55
ERGIC3-219ENST00000496172 EP300Q09472 2414 aaPredicted RBP11.62□□□□□ -0.55
ERGIC3-219ENST00000496172 PLXNA4Q9HCM2 1894 aa11.62□□□□□ -0.55
ERGIC3-219ENST00000496172 ZNF623O75123 536 aa11.62□□□□□ -0.55
ERGIC3-219ENST00000496172 CD2BP2O95400 341 aaKnown RBP11.62□□□□□ -0.55
ERGIC3-219ENST00000496172 DNAJB1P25685 340 aa11.62□□□□□ -0.55
ERGIC3-219ENST00000496172 PRPHP41219 470 aa11.62□□□□□ -0.55
ERGIC3-219ENST00000496172 ALDH7A1P49419 539 aaKnown RBP11.62□□□□□ -0.55
ERGIC3-219ENST00000496172 TOB1P50616 345 aaPredicted RBP11.62□□□□□ -0.55
ERGIC3-219ENST00000496172 PLCB3Q01970 1234 aa11.62□□□□□ -0.55
ERGIC3-219ENST00000496172 RNASELQ05823 741 aaKnown RBP11.62□□□□□ -0.55
ERGIC3-219ENST00000496172 BMS1Q14692 1282 aaKnown RBP11.62□□□□□ -0.55
ERGIC3-219ENST00000496172 CLLU1OSQ5K130 101 aa11.62□□□□□ -0.55
ERGIC3-219ENST00000496172 KRT79Q5XKE5 535 aa11.62□□□□□ -0.55
ERGIC3-219ENST00000496172 LARP1BQ659C4 914 aaKnown RBP11.62□□□□□ -0.55
ERGIC3-219ENST00000496172 POTEGQ6S5H5 508 aa11.62□□□□□ -0.55
ERGIC3-219ENST00000496172 PADI6Q6TGC4 694 aa11.62□□□□□ -0.55
ERGIC3-219ENST00000496172 KCNT2Q6UVM3 1135 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms