RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 ACKR2O00590 384 aa23.93■■□□□ 1.42
ECHDC3-205ENST00000496136 TGFB1I1O43294 461 aa23.93■■□□□ 1.42
ECHDC3-205ENST00000496136 PRKCBP05771 671 aa23.93■■□□□ 1.42
ECHDC3-205ENST00000496136 FAM187BQ17R55 369 aa23.93■■□□□ 1.42
ECHDC3-205ENST00000496136 SYCP3Q8IZU3 236 aa23.93■■□□□ 1.42
ECHDC3-205ENST00000496136 CCDC155Q8N6L0 562 aa23.93■■□□□ 1.42
ECHDC3-205ENST00000496136 P2RX5Q93086 422 aa23.93■■□□□ 1.42
ECHDC3-205ENST00000496136 NAT10Q9H0A0 1025 aaKnown RBP23.93■■□□□ 1.42
ECHDC3-205ENST00000496136 PRMT7Q9NVM4 692 aaPredicted RBP23.93■■□□□ 1.42
ECHDC3-205ENST00000496136 EXOC7Q9UPT5 735 aa23.93■■□□□ 1.42
ECHDC3-205ENST00000496136 CTNND2Q9UQB3 1225 aa23.93■■□□□ 1.42
ECHDC3-205ENST00000496136 ZMYM2Q9UBW7 1377 aa23.93■■□□□ 1.42
ECHDC3-205ENST00000496136 CCDC85CA6NKD9 419 aa23.92■■□□□ 1.42
ECHDC3-205ENST00000496136 TTLL13PA6NNM8 815 aa23.92■■□□□ 1.42
ECHDC3-205ENST00000496136 RBAK-RBAKDNI3L0D1 243 aa23.92■■□□□ 1.42
ECHDC3-205ENST00000496136 PITPNM1O00562 1244 aa23.92■■□□□ 1.42
ECHDC3-205ENST00000496136 FGFR4P22455 802 aa23.92■■□□□ 1.42
ECHDC3-205ENST00000496136 CCNE1P24864 410 aa23.92■■□□□ 1.42
ECHDC3-205ENST00000496136 ZNF165P49910 485 aa23.92■■□□□ 1.42
ECHDC3-205ENST00000496136 STX17P56962 302 aa23.92■■□□□ 1.42
ECHDC3-205ENST00000496136 PAK1Q13153 545 aa23.92■■□□□ 1.42
ECHDC3-205ENST00000496136 AMHR2Q16671 573 aa23.92■■□□□ 1.42
ECHDC3-205ENST00000496136 ANKRD40Q6AI12 368 aa23.92■■□□□ 1.42
ECHDC3-205ENST00000496136 NOC4LQ9BVI4 516 aaKnown RBP23.92■■□□□ 1.42
ECHDC3-205ENST00000496136 OSBPL7Q9BZF2 842 aa23.92■■□□□ 1.42
ECHDC3-205ENST00000496136 GBP3Q9H0R5 595 aa23.92■■□□□ 1.42
ECHDC3-205ENST00000496136 RWDD2AQ9UIY3 292 aa23.92■■□□□ 1.42
ECHDC3-205ENST00000496136 PDXKO00764 312 aa23.91■■□□□ 1.42
ECHDC3-205ENST00000496136 CLTBP09497 229 aa23.91■■□□□ 1.42
ECHDC3-205ENST00000496136 SELPP16109 830 aa23.91■■□□□ 1.42
ECHDC3-205ENST00000496136 TARS2Q9BW92 718 aaKnown RBP23.91■■□□□ 1.42
ECHDC3-205ENST00000496136 TBX21Q9UL17 535 aa23.91■■□□□ 1.42
ECHDC3-205ENST00000496136 NOC2LQ9Y3T9 749 aaKnown RBP23.91■■□□□ 1.42
ECHDC3-205ENST00000496136 TRIM49BA6NDI0 452 aa23.91■■□□□ 1.42
ECHDC3-205ENST00000496136 CAVIN2O95810 425 aa23.91■■□□□ 1.42
ECHDC3-205ENST00000496136 PCBP1Q15365 356 aaKnown RBP eCLIP23.91■■□□□ 1.42
ECHDC3-205ENST00000496136 ZCWPW2Q504Y3 356 aa23.91■■□□□ 1.42
ECHDC3-205ENST00000496136 FBXO47Q5MNV8 452 aa23.91■■□□□ 1.42
ECHDC3-205ENST00000496136 PPP4R3CPQ6ZMV5 832 aa23.91■■□□□ 1.42
ECHDC3-205ENST00000496136 GAS2L3Q86XJ1 694 aa23.91■■□□□ 1.42
ECHDC3-205ENST00000496136 PRIMPOLQ96LW4 560 aa23.91■■□□□ 1.42
ECHDC3-205ENST00000496136 HIPK3Q9H422 1215 aa23.91■■□□□ 1.42
ECHDC3-205ENST00000496136 TMEM39AQ9NV64 488 aa23.91■■□□□ 1.42
ECHDC3-205ENST00000496136 TYW1Q9NV66 732 aaKnown RBP23.91■■□□□ 1.42
ECHDC3-205ENST00000496136 TRAF3IP3Q9Y228 551 aa23.91■■□□□ 1.42
ECHDC3-205ENST00000496136 ANKRD63C9JTQ0 380 aa23.9■■□□□ 1.42
ECHDC3-205ENST00000496136 HNRNPDLO14979 420 aaKnown RBP23.9■■□□□ 1.42
ECHDC3-205ENST00000496136 B4GALT5O43286 388 aa23.9■■□□□ 1.42
ECHDC3-205ENST00000496136 PIGRP01833 764 aa23.9■■□□□ 1.42
ECHDC3-205ENST00000496136 PRPF4BQ13523 1007 aaKnown RBP23.9■■□□□ 1.42
ECHDC3-205ENST00000496136 TTI2Q6NXR4 508 aa23.9■■□□□ 1.42
ECHDC3-205ENST00000496136 LRRC8DQ7L1W4 858 aa23.9■■□□□ 1.42
ECHDC3-205ENST00000496136 BPIFA3Q9BQP9 254 aa23.9■■□□□ 1.42
ECHDC3-205ENST00000496136 MRPL4Q9BYD3 311 aaKnown RBP23.9■■□□□ 1.42
ECHDC3-205ENST00000496136 UMODL1Q5DID0 1318 aa23.89■■□□□ 1.42
ECHDC3-205ENST00000496136 TISP43B9A030 160 aa23.89■■□□□ 1.42
ECHDC3-205ENST00000496136 ERLIN2O94905 339 aa23.89■■□□□ 1.42
ECHDC3-205ENST00000496136 SFPQP23246 707 aaKnown RBP eCLIP23.89■■□□□ 1.42
ECHDC3-205ENST00000496136 MBTPS1Q14703 1052 aa23.89■■□□□ 1.42
ECHDC3-205ENST00000496136 SLC39A4Q6P5W5 647 aa23.89■■□□□ 1.42
ECHDC3-205ENST00000496136 ZPBP2Q6X784 338 aa23.89■■□□□ 1.42
ECHDC3-205ENST00000496136 CATSPER4Q7RTX7 472 aa23.89■■□□□ 1.42
ECHDC3-205ENST00000496136 BICD1Q96G01 975 aa23.89■■□□□ 1.42
ECHDC3-205ENST00000496136 ACO2Q99798 780 aaKnown RBP23.89■■□□□ 1.42
ECHDC3-205ENST00000496136 AGO3Q9H9G7 860 aaKnown RBP23.89■■□□□ 1.42
ECHDC3-205ENST00000496136 SQORQ9Y6N5 450 aa23.89■■□□□ 1.42
ECHDC3-205ENST00000496136 BICDL2A1A5D9 508 aa23.88■■□□□ 1.41
ECHDC3-205ENST00000496136 TSPAN1O60635 241 aa23.88■■□□□ 1.41
ECHDC3-205ENST00000496136 RPS6KA5O75582 802 aa23.88■■□□□ 1.41
ECHDC3-205ENST00000496136 ARF4P18085 180 aaPredicted RBP23.88■■□□□ 1.41
ECHDC3-205ENST00000496136 LRRC63Q05C16 580 aa23.88■■□□□ 1.41
ECHDC3-205ENST00000496136 LPIN1Q14693 890 aa23.88■■□□□ 1.41
ECHDC3-205ENST00000496136 HS2ST1Q7LGA3 356 aa23.88■■□□□ 1.41
ECHDC3-205ENST00000496136 FAM228AQ86W67 206 aa23.88■■□□□ 1.41
ECHDC3-205ENST00000496136 AGPAT3Q9NRZ7 376 aa23.88■■□□□ 1.41
ECHDC3-205ENST00000496136 GHRP10912 638 aa23.88■■□□□ 1.41
ECHDC3-205ENST00000496136 ADSSP30520 456 aa23.88■■□□□ 1.41
ECHDC3-205ENST00000496136 HOXA11P31270 313 aaPredicted RBP23.88■■□□□ 1.41
ECHDC3-205ENST00000496136 LIG4P49917 911 aa23.88■■□□□ 1.41
ECHDC3-205ENST00000496136 FOXR2Q6PJQ5 311 aa23.88■■□□□ 1.41
ECHDC3-205ENST00000496136 TSHZ1Q6ZSZ6 1077 aa23.88■■□□□ 1.41
ECHDC3-205ENST00000496136 USP38Q8NB14 1042 aa23.88■■□□□ 1.41
ECHDC3-205ENST00000496136 ENOX1Q8TC92 643 aaKnown RBP23.88■■□□□ 1.41
ECHDC3-205ENST00000496136 DUSP9Q99956 384 aaKnown RBP23.88■■□□□ 1.41
ECHDC3-205ENST00000496136 PPP1R12CQ9BZL4 782 aa23.88■■□□□ 1.41
ECHDC3-205ENST00000496136 CBX8Q9HC52 389 aa23.88■■□□□ 1.41
ECHDC3-205ENST00000496136 ST3GAL5Q9UNP4 418 aa23.88■■□□□ 1.41
ECHDC3-205ENST00000496136 CNTNAP2Q9UHC6 1331 aa23.87■■□□□ 1.41
ECHDC3-205ENST00000496136 CLIC2O15247 247 aa23.87■■□□□ 1.41
ECHDC3-205ENST00000496136 CALUO43852 315 aaPredicted RBP23.87■■□□□ 1.41
ECHDC3-205ENST00000496136 SNRPFP62306 86 aaKnown RBP23.87■■□□□ 1.41
ECHDC3-205ENST00000496136 IQCB1Q15051 598 aa23.87■■□□□ 1.41
ECHDC3-205ENST00000496136 GOLGA5Q8TBA6 731 aa23.87■■□□□ 1.41
ECHDC3-205ENST00000496136 ZBTB45Q96K62 511 aaPredicted RBP23.87■■□□□ 1.41
ECHDC3-205ENST00000496136 TSG101Q99816 390 aa23.87■■□□□ 1.41
ECHDC3-205ENST00000496136 CGNQ9P2M7 1197 aaKnown RBP23.87■■□□□ 1.41
ECHDC3-205ENST00000496136 STYXL1Q9Y6J8 313 aa23.87■■□□□ 1.41
ECHDC3-205ENST00000496136 ALPK3Q96L96 1907 aa23.86■■□□□ 1.41
ECHDC3-205ENST00000496136 A0A1B0GUA9 196 aa23.86■■□□□ 1.41
ECHDC3-205ENST00000496136 GPR182O15218 404 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms