RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 LUC7LQ9NQ29 371 aaKnown RBP11.21□□□□□ -0.61
HDAC3-214ENST00000495485 ARID2Q68CP9 1835 aa11.21□□□□□ -0.62
HDAC3-214ENST00000495485 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.2□□□□□ -0.62
HDAC3-214ENST00000495485 TTC26A0AVF1 554 aa11.2□□□□□ -0.62
HDAC3-214ENST00000495485 EXOC3O60645 756 aa11.2□□□□□ -0.62
HDAC3-214ENST00000495485 PPP1R37O75864 691 aa11.2□□□□□ -0.62
HDAC3-214ENST00000495485 MYCP01106 439 aaPredicted RBP11.2□□□□□ -0.62
HDAC3-214ENST00000495485 FXR1P51114 621 aaKnown RBP eCLIP11.2□□□□□ -0.62
HDAC3-214ENST00000495485 ACLYP53396 1101 aa11.2□□□□□ -0.62
HDAC3-214ENST00000495485 NPEPPSP55786 919 aa11.2□□□□□ -0.62
HDAC3-214ENST00000495485 PEX3P56589 373 aa11.2□□□□□ -0.62
HDAC3-214ENST00000495485 SOX10P56693 466 aa11.2□□□□□ -0.62
HDAC3-214ENST00000495485 ARHGAP1Q07960 439 aa11.2□□□□□ -0.62
HDAC3-214ENST00000495485 STRN3Q13033 797 aa11.2□□□□□ -0.62
HDAC3-214ENST00000495485 SNX17Q15036 470 aa11.2□□□□□ -0.62
HDAC3-214ENST00000495485 MTERF2Q49AM1 385 aa11.2□□□□□ -0.62
HDAC3-214ENST00000495485 TCERG1LQ5VWI1 586 aa11.2□□□□□ -0.62
HDAC3-214ENST00000495485 GBP6Q6ZN66 633 aa11.2□□□□□ -0.62
HDAC3-214ENST00000495485 INTS8Q75QN2 995 aaKnown RBP11.2□□□□□ -0.62
HDAC3-214ENST00000495485 MAEAQ7L5Y9 396 aa11.2□□□□□ -0.62
HDAC3-214ENST00000495485 CCDC60Q8IWA6 550 aaPredicted RBP11.2□□□□□ -0.62
HDAC3-214ENST00000495485 GLG1Q92896 1179 aa11.2□□□□□ -0.62
HDAC3-214ENST00000495485 TOX2Q96NM4 488 aa11.2□□□□□ -0.62
HDAC3-214ENST00000495485 MTG1Q9BT17 334 aaPredicted RBP11.2□□□□□ -0.62
HDAC3-214ENST00000495485 STRA6Q9BX79 667 aa11.2□□□□□ -0.62
HDAC3-214ENST00000495485 FGFBP2Q9BYJ0 223 aa11.2□□□□□ -0.62
HDAC3-214ENST00000495485 KIAA1586Q9HCI6 787 aa11.2□□□□□ -0.62
HDAC3-214ENST00000495485 AGPAT3Q9NRZ7 376 aa11.2□□□□□ -0.62
HDAC3-214ENST00000495485 TRMT1Q9NXH9 659 aaKnown RBP11.2□□□□□ -0.62
HDAC3-214ENST00000495485 CEP72Q9P209 647 aa11.2□□□□□ -0.62
HDAC3-214ENST00000495485 PPP2R2CQ9Y2T4 447 aa11.2□□□□□ -0.62
HDAC3-214ENST00000495485 DOCK5Q9H7D0 1870 aa11.2□□□□□ -0.62
HDAC3-214ENST00000495485 A0A0U1RQG5 324 aaPredicted RBP11.19□□□□□ -0.62
HDAC3-214ENST00000495485 GSTTP1A0A1W2PQM5 241 aa11.19□□□□□ -0.62
HDAC3-214ENST00000495485 CLIC2O15247 247 aa11.19□□□□□ -0.62
HDAC3-214ENST00000495485 TGFB1I1O43294 461 aa11.19□□□□□ -0.62
HDAC3-214ENST00000495485 ADCY6O43306 1168 aa11.19□□□□□ -0.62
HDAC3-214ENST00000495485 ARIH2O95376 493 aa11.19□□□□□ -0.62
HDAC3-214ENST00000495485 PGK1P00558 417 aa11.19□□□□□ -0.62
HDAC3-214ENST00000495485 RPLP2P05387 115 aaKnown RBP11.19□□□□□ -0.62
HDAC3-214ENST00000495485 MMP3P08254 477 aa11.19□□□□□ -0.62
HDAC3-214ENST00000495485 CCDC172P0C7W6 258 aa11.19□□□□□ -0.62
HDAC3-214ENST00000495485 TCF7P36402 384 aaPredicted RBP11.19□□□□□ -0.62
HDAC3-214ENST00000495485 SP2Q02086 613 aa11.19□□□□□ -0.62
HDAC3-214ENST00000495485 ENPEPQ07075 957 aa11.19□□□□□ -0.62
HDAC3-214ENST00000495485 KCNA10Q16322 511 aa11.19□□□□□ -0.62
HDAC3-214ENST00000495485 LY6KQ17RY6 165 aa11.19□□□□□ -0.62
HDAC3-214ENST00000495485 ZC2HC1CQ53FD0 456 aaPredicted RBP11.19□□□□□ -0.62
HDAC3-214ENST00000495485 E4F1Q66K89 784 aaPredicted RBP11.19□□□□□ -0.62
HDAC3-214ENST00000495485 PLA2G4FQ68DD2 849 aa11.19□□□□□ -0.62
HDAC3-214ENST00000495485 SLFN12LQ6IEE8 588 aa11.19□□□□□ -0.62
HDAC3-214ENST00000495485 NFRKBQ6P4R8 1299 aa11.19□□□□□ -0.62
HDAC3-214ENST00000495485 TRMT1LQ7Z2T5 733 aaKnown RBP11.19□□□□□ -0.62
HDAC3-214ENST00000495485 TMEM139Q8IV31 216 aa11.19□□□□□ -0.62
HDAC3-214ENST00000495485 DAW1Q8N136 415 aa11.19□□□□□ -0.62
HDAC3-214ENST00000495485 XXYLT1Q8NBI6 393 aa11.19□□□□□ -0.62
HDAC3-214ENST00000495485 SYN2Q92777 582 aaPredicted RBP11.19□□□□□ -0.62
HDAC3-214ENST00000495485 EEF2KMTQ96G04 330 aa11.19□□□□□ -0.62
HDAC3-214ENST00000495485 PAWRQ96IZ0 340 aaKnown RBP11.19□□□□□ -0.62
HDAC3-214ENST00000495485 C16orf45Q96MC5 204 aaPredicted RBP11.19□□□□□ -0.62
HDAC3-214ENST00000495485 SPATA33Q96N06 139 aa11.19□□□□□ -0.62
HDAC3-214ENST00000495485 FIZ1Q96SL8 496 aa11.19□□□□□ -0.62
HDAC3-214ENST00000495485 PLCB1Q9NQ66 1216 aa11.19□□□□□ -0.62
HDAC3-214ENST00000495485 STARD7Q9NQZ5 370 aa11.19□□□□□ -0.62
HDAC3-214ENST00000495485 DMAC2Q9NW81 257 aa11.19□□□□□ -0.62
HDAC3-214ENST00000495485 ZNF215Q9UL58 517 aaPredicted RBP11.19□□□□□ -0.62
HDAC3-214ENST00000495485 MYO6Q9UM54 1294 aa11.19□□□□□ -0.62
HDAC3-214ENST00000495485 SIK3Q9Y2K2 1263 aa11.19□□□□□ -0.62
HDAC3-214ENST00000495485 EMSYQ7Z589 1322 aa11.18□□□□□ -0.62
HDAC3-214ENST00000495485 A0A1W2PQ45 241 aaPredicted RBP11.18□□□□□ -0.62
HDAC3-214ENST00000495485 A0A1W2PQY0 241 aa11.18□□□□□ -0.62
HDAC3-214ENST00000495485 SLC16A4O15374 487 aa11.18□□□□□ -0.62
HDAC3-214ENST00000495485 P4HA2O15460 535 aa11.18□□□□□ -0.62
HDAC3-214ENST00000495485 ZNF862O60290 1169 aa11.18□□□□□ -0.62
HDAC3-214ENST00000495485 HBP1O60381 514 aa11.18□□□□□ -0.62
HDAC3-214ENST00000495485 LGR5O75473 907 aa11.18□□□□□ -0.62
HDAC3-214ENST00000495485 LDHAP00338 332 aaKnown RBP11.18□□□□□ -0.62
HDAC3-214ENST00000495485 ASGR1P07306 291 aa11.18□□□□□ -0.62
HDAC3-214ENST00000495485 HNRNPH3P31942 346 aaKnown RBP11.18□□□□□ -0.62
HDAC3-214ENST00000495485 NAMPTP43490 491 aa11.18□□□□□ -0.62
HDAC3-214ENST00000495485 NPTX2P47972 431 aa11.18□□□□□ -0.62
HDAC3-214ENST00000495485 MNX1P50219 401 aaPredicted RBP11.18□□□□□ -0.62
HDAC3-214ENST00000495485 PURAQ00577 322 aaKnown RBP11.18□□□□□ -0.62
HDAC3-214ENST00000495485 MLLT1Q03111 559 aaPredicted RBP11.18□□□□□ -0.62
HDAC3-214ENST00000495485 MXD4Q14582 209 aaPredicted RBP11.18□□□□□ -0.62
HDAC3-214ENST00000495485 EMC2Q15006 297 aa11.18□□□□□ -0.62
HDAC3-214ENST00000495485 SPA17Q15506 151 aa11.18□□□□□ -0.62
HDAC3-214ENST00000495485 MEA1Q16626 185 aa11.18□□□□□ -0.62
HDAC3-214ENST00000495485 EXOC3L4Q17RC7 722 aa11.18□□□□□ -0.62
HDAC3-214ENST00000495485 ARHGAP29Q52LW3 1261 aa11.18□□□□□ -0.62
HDAC3-214ENST00000495485 DCAF17Q5H9S7 520 aaPredicted RBP11.18□□□□□ -0.62
HDAC3-214ENST00000495485 GJC2Q5T442 439 aaPredicted RBP11.18□□□□□ -0.62
HDAC3-214ENST00000495485 IER5Q5VY09 327 aa11.18□□□□□ -0.62
HDAC3-214ENST00000495485 SESTD1Q86VW0 696 aa11.18□□□□□ -0.62
HDAC3-214ENST00000495485 DEPTORQ8TB45 409 aa11.18□□□□□ -0.62
HDAC3-214ENST00000495485 KCNN1Q92952 543 aa11.18□□□□□ -0.62
HDAC3-214ENST00000495485 BICD1Q96G01 975 aa11.18□□□□□ -0.62
HDAC3-214ENST00000495485 PPP1R13BQ96KQ4 1090 aa11.18□□□□□ -0.62
HDAC3-214ENST00000495485 CCDC42Q96M95 316 aa11.18□□□□□ -0.62
HDAC3-214ENST00000495485 GPR20Q99678 358 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms