RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 ASIC1P78348 528 aa12.26□□□□□ -0.45
APTX-230ENST00000494649 PRPF4BQ13523 1007 aaKnown RBP12.26□□□□□ -0.45
APTX-230ENST00000494649 CUL4BQ13620 913 aa12.26□□□□□ -0.45
APTX-230ENST00000494649 SLC24A5Q71RS6 500 aa12.26□□□□□ -0.45
APTX-230ENST00000494649 TAS1R3Q7RTX0 852 aa12.26□□□□□ -0.45
APTX-230ENST00000494649 ERCC4Q92889 916 aaPredicted RBP12.26□□□□□ -0.45
APTX-230ENST00000494649 KBTBD4Q9NVX7 518 aa12.26□□□□□ -0.45
APTX-230ENST00000494649 LARSQ9P2J5 1176 aaKnown RBP12.26□□□□□ -0.45
APTX-230ENST00000494649 HCSTQ9UBK5 93 aa12.26□□□□□ -0.45
APTX-230ENST00000494649 ODF2LQ9ULJ1 636 aa12.26□□□□□ -0.45
APTX-230ENST00000494649 MYH11P35749 1972 aa12.26□□□□□ -0.45
APTX-230ENST00000494649 A0A1W2PQ27 194 aa12.25□□□□□ -0.45
APTX-230ENST00000494649 A0A1W2PQ64 194 aa12.25□□□□□ -0.45
APTX-230ENST00000494649 A0A1W2PQD8 194 aa12.25□□□□□ -0.45
APTX-230ENST00000494649 C9IYK1 514 aa12.25□□□□□ -0.45
APTX-230ENST00000494649 TRAK2O60296 914 aa12.25□□□□□ -0.45
APTX-230ENST00000494649 EFCAB14O75071 495 aa12.25□□□□□ -0.45
APTX-230ENST00000494649 PRPF40AO75400 957 aaKnown RBP12.25□□□□□ -0.45
APTX-230ENST00000494649 PRR29P0C7W0 189 aa12.25□□□□□ -0.45
APTX-230ENST00000494649 HARSP12081 509 aaKnown RBP12.25□□□□□ -0.45
APTX-230ENST00000494649 HERC4Q5GLZ8 1057 aaPredicted RBP12.25□□□□□ -0.45
APTX-230ENST00000494649 FAM178BQ8IXR5 827 aa12.25□□□□□ -0.45
APTX-230ENST00000494649 ZNF710Q8N1W2 664 aa12.25□□□□□ -0.45
APTX-230ENST00000494649 GLIS3Q8NEA6 775 aa12.25□□□□□ -0.45
APTX-230ENST00000494649 TRIM9Q9C026 710 aa12.25□□□□□ -0.45
APTX-230ENST00000494649 CCDC113Q9H0I3 377 aa12.25□□□□□ -0.45
APTX-230ENST00000494649 TNMDQ9H2S6 317 aa12.25□□□□□ -0.45
APTX-230ENST00000494649 PANK4Q9NVE7 773 aa12.25□□□□□ -0.45
APTX-230ENST00000494649 PCDHB7Q9Y5E2 793 aa12.25□□□□□ -0.45
APTX-230ENST00000494649 ZNF202O95125 648 aa12.25□□□□□ -0.45
APTX-230ENST00000494649 CSPG5O95196 566 aa12.25□□□□□ -0.45
APTX-230ENST00000494649 NPTXRO95502 500 aa12.25□□□□□ -0.45
APTX-230ENST00000494649 SARSP49591 514 aaKnown RBP12.25□□□□□ -0.45
APTX-230ENST00000494649 CASP5P51878 434 aa12.25□□□□□ -0.45
APTX-230ENST00000494649 SMTNP53814 917 aa12.25□□□□□ -0.45
APTX-230ENST00000494649 EEF1DP3Q658K8 133 aa12.25□□□□□ -0.45
APTX-230ENST00000494649 HAUS6Q7Z4H7 955 aa12.25□□□□□ -0.45
APTX-230ENST00000494649 ZBTB33Q86T24 672 aa12.25□□□□□ -0.45
APTX-230ENST00000494649 IFNLR1Q8IU57 520 aaPredicted RBP12.25□□□□□ -0.45
APTX-230ENST00000494649 TMEM161BQ8NDZ6 487 aa12.25□□□□□ -0.45
APTX-230ENST00000494649 CNNM3Q8NE01 707 aa12.25□□□□□ -0.45
APTX-230ENST00000494649 TIFAQ96CG3 184 aa12.25□□□□□ -0.45
APTX-230ENST00000494649 PAGE5Q96GU1 130 aa12.25□□□□□ -0.45
APTX-230ENST00000494649 TIPINQ9BVW5 301 aa12.25□□□□□ -0.45
APTX-230ENST00000494649 TARS2Q9BW92 718 aaKnown RBP12.25□□□□□ -0.45
APTX-230ENST00000494649 NFKBIZQ9BYH8 718 aa12.25□□□□□ -0.45
APTX-230ENST00000494649 TRIM6Q9C030 488 aaPredicted RBP12.25□□□□□ -0.45
APTX-230ENST00000494649 C2orf40Q9H1Z8 148 aa12.25□□□□□ -0.45
APTX-230ENST00000494649 FZD8Q9H461 694 aa12.25□□□□□ -0.45
APTX-230ENST00000494649 MRPL44Q9H9J2 332 aaKnown RBP12.25□□□□□ -0.45
APTX-230ENST00000494649 FAM105AQ9NUU6 356 aa12.25□□□□□ -0.45
APTX-230ENST00000494649 PRMT7Q9NVM4 692 aaPredicted RBP12.25□□□□□ -0.45
APTX-230ENST00000494649 ARHGAP28Q9P2N2 729 aa12.25□□□□□ -0.45
APTX-230ENST00000494649 TULP1O00294 542 aaPredicted RBP12.24□□□□□ -0.45
APTX-230ENST00000494649 NR1I2O75469 434 aa12.24□□□□□ -0.45
APTX-230ENST00000494649 SLFN14P0C7P3 912 aa12.24□□□□□ -0.45
APTX-230ENST00000494649 ATF7P17544 494 aaPredicted RBP12.24□□□□□ -0.45
APTX-230ENST00000494649 ZNF131P52739 623 aa12.24□□□□□ -0.45
APTX-230ENST00000494649 POU5F1BQ06416 359 aa12.24□□□□□ -0.45
APTX-230ENST00000494649 NCBP1Q09161 790 aaKnown RBP12.24□□□□□ -0.45
APTX-230ENST00000494649 KCNA1Q09470 495 aa12.24□□□□□ -0.45
APTX-230ENST00000494649 UBXN11Q5T124 520 aa12.24□□□□□ -0.45
APTX-230ENST00000494649 NT5DC1Q5TFE4 455 aa12.24□□□□□ -0.45
APTX-230ENST00000494649 NOTUMQ6P988 496 aa12.24□□□□□ -0.45
APTX-230ENST00000494649 ECHDC2Q86YB7 292 aa12.24□□□□□ -0.45
APTX-230ENST00000494649 PHOSPHO2Q8TCD6 241 aa12.24□□□□□ -0.45
APTX-230ENST00000494649 ZBTB45Q96K62 511 aaPredicted RBP12.24□□□□□ -0.45
APTX-230ENST00000494649 FIZ1Q96SL8 496 aa12.24□□□□□ -0.45
APTX-230ENST00000494649 RNF39Q9H2S5 420 aa12.24□□□□□ -0.45
APTX-230ENST00000494649 NXF3Q9H4D5 531 aaKnown RBP12.24□□□□□ -0.45
APTX-230ENST00000494649 DACT1Q9NYF0 836 aa12.24□□□□□ -0.45
APTX-230ENST00000494649 ANKFY1Q9P2R3 1169 aa12.24□□□□□ -0.45
APTX-230ENST00000494649 MSRAQ9UJ68 235 aa12.24□□□□□ -0.45
APTX-230ENST00000494649 INPP5FQ9Y2H2 1132 aa12.24□□□□□ -0.45
APTX-230ENST00000494649 PCDHB2Q9Y5E7 798 aa12.24□□□□□ -0.45
APTX-230ENST00000494649 A0A0U1RQF3 1178 aa12.23□□□□□ -0.45
APTX-230ENST00000494649 TISP43B9A030 160 aa12.23□□□□□ -0.45
APTX-230ENST00000494649 GCNT3O95395 438 aa12.23□□□□□ -0.45
APTX-230ENST00000494649 MYBP10242 640 aa12.23□□□□□ -0.45
APTX-230ENST00000494649 MAPTP10636 758 aaKnown RBP12.23□□□□□ -0.45
APTX-230ENST00000494649 AKAP5P24588 427 aa12.23□□□□□ -0.45
APTX-230ENST00000494649 AFF1P51825 1210 aaKnown RBP12.23□□□□□ -0.45
APTX-230ENST00000494649 OSTNP61366 133 aa12.23□□□□□ -0.45
APTX-230ENST00000494649 SMAD3P84022 425 aaKnown RBP12.23□□□□□ -0.45
APTX-230ENST00000494649 STRN3Q13033 797 aa12.23□□□□□ -0.45
APTX-230ENST00000494649 COASYQ13057 564 aa12.23□□□□□ -0.45
APTX-230ENST00000494649 SEZ6Q53EL9 994 aa12.23□□□□□ -0.45
APTX-230ENST00000494649 PPP2R2DQ66LE6 453 aa12.23□□□□□ -0.45
APTX-230ENST00000494649 HELQQ8TDG4 1101 aa12.23□□□□□ -0.45
APTX-230ENST00000494649 BICD1Q96G01 975 aa12.23□□□□□ -0.45
APTX-230ENST00000494649 CUEDC2Q9H467 287 aa12.23□□□□□ -0.45
APTX-230ENST00000494649 PDZD7Q9H5P4 517 aa12.23□□□□□ -0.45
APTX-230ENST00000494649 C17orf75Q9HAS0 396 aa12.23□□□□□ -0.45
APTX-230ENST00000494649 SLC28A3Q9HAS3 691 aa12.23□□□□□ -0.45
APTX-230ENST00000494649 CHST12Q9NRB3 414 aa12.23□□□□□ -0.45
APTX-230ENST00000494649 C1orf112Q9NSG2 853 aa12.23□□□□□ -0.45
APTX-230ENST00000494649 PHLPP2Q6ZVD8 1323 aa12.23□□□□□ -0.45
APTX-230ENST00000494649 TTC3P53804 2025 aa12.23□□□□□ -0.45
APTX-230ENST00000494649 TBKBP1A7MCY6 615 aa12.23□□□□□ -0.45
APTX-230ENST00000494649 ACKR2O00590 384 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms