RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 KPNB1Q14974 876 aaKnown RBP10.88□□□□□ -0.67
LINC00488-201ENST00000494582 LRRC74BQ6ZQY2 392 aa10.88□□□□□ -0.67
LINC00488-201ENST00000494582 HEATR3Q7Z4Q2 680 aa10.88□□□□□ -0.67
LINC00488-201ENST00000494582 PROM2Q8N271 834 aa10.88□□□□□ -0.67
LINC00488-201ENST00000494582 ART4Q93070 314 aa10.88□□□□□ -0.67
LINC00488-201ENST00000494582 PWWP2AQ96N64 755 aa10.88□□□□□ -0.67
LINC00488-201ENST00000494582 LRRC37BQ96QE4 947 aa10.88□□□□□ -0.67
LINC00488-201ENST00000494582 CARD9Q9H257 536 aa10.88□□□□□ -0.67
LINC00488-201ENST00000494582 TLE6Q9H808 572 aa10.88□□□□□ -0.67
LINC00488-201ENST00000494582 RHBDL2Q9NX52 303 aa10.88□□□□□ -0.67
LINC00488-201ENST00000494582 LRP2BPQ9P2M1 347 aa10.88□□□□□ -0.67
LINC00488-201ENST00000494582 STOML1Q9UBI4 398 aa10.88□□□□□ -0.67
LINC00488-201ENST00000494582 GRID1Q9ULK0 1009 aa10.88□□□□□ -0.67
LINC00488-201ENST00000494582 COG5Q9UP83 839 aa10.88□□□□□ -0.67
LINC00488-201ENST00000494582 PTPN22Q9Y2R2 807 aa10.88□□□□□ -0.67
LINC00488-201ENST00000494582 WASF2Q9Y6W5 498 aa10.88□□□□□ -0.67
LINC00488-201ENST00000494582 TNS3Q68CZ2 1445 aa10.88□□□□□ -0.67
LINC00488-201ENST00000494582 LAD1O00515 517 aa10.88□□□□□ -0.67
LINC00488-201ENST00000494582 CAPN9O14815 690 aa10.88□□□□□ -0.67
LINC00488-201ENST00000494582 HNRNPRO43390 633 aaKnown RBP10.88□□□□□ -0.67
LINC00488-201ENST00000494582 PHF2O75151 1096 aa10.88□□□□□ -0.67
LINC00488-201ENST00000494582 PENKP01210 267 aaPredicted RBP10.88□□□□□ -0.67
LINC00488-201ENST00000494582 LYNP07948 512 aa10.88□□□□□ -0.67
LINC00488-201ENST00000494582 CYP2D6P10635 497 aa10.88□□□□□ -0.67
LINC00488-201ENST00000494582 ABCB4P21439 1286 aa10.88□□□□□ -0.67
LINC00488-201ENST00000494582 COASYQ13057 564 aa10.88□□□□□ -0.67
LINC00488-201ENST00000494582 LSAMPQ13449 338 aa10.88□□□□□ -0.67
LINC00488-201ENST00000494582 ACBD5Q5T8D3 534 aaPredicted RBP10.88□□□□□ -0.67
LINC00488-201ENST00000494582 RASIP1Q5U651 963 aa10.88□□□□□ -0.67
LINC00488-201ENST00000494582 SESTD1Q86VW0 696 aa10.88□□□□□ -0.67
LINC00488-201ENST00000494582 SYCE1Q8N0S2 351 aa10.88□□□□□ -0.67
LINC00488-201ENST00000494582 WDR60Q8WVS4 1066 aa10.88□□□□□ -0.67
LINC00488-201ENST00000494582 DNAJC19Q96DA6 116 aa10.88□□□□□ -0.67
LINC00488-201ENST00000494582 ROPN1BQ9BZX4 212 aaPredicted RBP10.88□□□□□ -0.67
LINC00488-201ENST00000494582 ROPN1Q9HAT0 212 aaPredicted RBP10.88□□□□□ -0.67
LINC00488-201ENST00000494582 RIC8AQ9NPQ8 531 aa10.88□□□□□ -0.67
LINC00488-201ENST00000494582 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.88□□□□□ -0.67
LINC00488-201ENST00000494582 CICQ96RK0 1608 aaPredicted RBP10.88□□□□□ -0.67
LINC00488-201ENST00000494582 MAGEB6P1A0A0J9YX57 407 aa10.87□□□□□ -0.67
LINC00488-201ENST00000494582 POTEMA6NI47 508 aa10.87□□□□□ -0.67
LINC00488-201ENST00000494582 USP17L12C9JPN9 530 aa10.87□□□□□ -0.67
LINC00488-201ENST00000494582 USP17L21D6R901 530 aa10.87□□□□□ -0.67
LINC00488-201ENST00000494582 TRAFD1O14545 582 aaPredicted RBP10.87□□□□□ -0.67
LINC00488-201ENST00000494582 SKIP12755 728 aa10.87□□□□□ -0.67
LINC00488-201ENST00000494582 PON1P27169 355 aa10.87□□□□□ -0.67
LINC00488-201ENST00000494582 PRKCIP41743 596 aa10.87□□□□□ -0.67
LINC00488-201ENST00000494582 CACNB1Q02641 598 aaPredicted RBP10.87□□□□□ -0.67
LINC00488-201ENST00000494582 MKRN3Q13064 507 aaKnown RBP10.87□□□□□ -0.67
LINC00488-201ENST00000494582 CCDC6Q16204 474 aa10.87□□□□□ -0.67
LINC00488-201ENST00000494582 SLC4A8Q2Y0W8 1093 aa10.87□□□□□ -0.67
LINC00488-201ENST00000494582 TAF1BQ53T94 588 aaPredicted RBP10.87□□□□□ -0.67
LINC00488-201ENST00000494582 RBM26Q5T8P6 1007 aaKnown RBP10.87□□□□□ -0.67
LINC00488-201ENST00000494582 ANKRD23Q86SG2 305 aa10.87□□□□□ -0.67
LINC00488-201ENST00000494582 SRRM1Q8IYB3 904 aaKnown RBP10.87□□□□□ -0.67
LINC00488-201ENST00000494582 SH3TC2Q8TF17 1288 aa10.87□□□□□ -0.67
LINC00488-201ENST00000494582 CALML4Q96GE6 196 aa10.87□□□□□ -0.67
LINC00488-201ENST00000494582 SERPINB12Q96P63 405 aa10.87□□□□□ -0.67
LINC00488-201ENST00000494582 HAPLN3Q96S86 360 aa10.87□□□□□ -0.67
LINC00488-201ENST00000494582 FAM192AQ9GZU8 254 aa10.87□□□□□ -0.67
LINC00488-201ENST00000494582 SIX2Q9NPC8 291 aa10.87□□□□□ -0.67
LINC00488-201ENST00000494582 MTMR7Q9Y216 660 aa10.87□□□□□ -0.67
LINC00488-201ENST00000494582 CASZ1Q86V15 1759 aa10.87□□□□□ -0.67
LINC00488-201ENST00000494582 RREB1Q92766 1687 aa10.87□□□□□ -0.67
LINC00488-201ENST00000494582 A6NJR5 290 aa10.87□□□□□ -0.67
LINC00488-201ENST00000494582 CETN3O15182 167 aa10.87□□□□□ -0.67
LINC00488-201ENST00000494582 ATP5HO75947 161 aa10.87□□□□□ -0.67
LINC00488-201ENST00000494582 FAM200BP0CF97 657 aa10.87□□□□□ -0.67
LINC00488-201ENST00000494582 FGFR1P11362 822 aa10.87□□□□□ -0.67
LINC00488-201ENST00000494582 MARK3P27448 753 aa10.87□□□□□ -0.67
LINC00488-201ENST00000494582 NPEPPSP55786 919 aa10.87□□□□□ -0.67
LINC00488-201ENST00000494582 TRIM28Q13263 835 aaKnown RBP10.87□□□□□ -0.67
LINC00488-201ENST00000494582 SETDB1Q15047 1291 aa10.87□□□□□ -0.67
LINC00488-201ENST00000494582 CTC1Q2NKJ3 1217 aa10.87□□□□□ -0.67
LINC00488-201ENST00000494582 CROCCP2Q86T23 111 aa10.87□□□□□ -0.67
LINC00488-201ENST00000494582 LCA5Q86VQ0 697 aa10.87□□□□□ -0.67
LINC00488-201ENST00000494582 PALB2Q86YC2 1186 aa10.87□□□□□ -0.67
LINC00488-201ENST00000494582 CPNE8Q86YQ8 564 aa10.87□□□□□ -0.67
LINC00488-201ENST00000494582 ZNF384Q8TF68 577 aa10.87□□□□□ -0.67
LINC00488-201ENST00000494582 C10orf82Q8WW14 230 aa10.87□□□□□ -0.67
LINC00488-201ENST00000494582 RAD54LQ92698 747 aa10.87□□□□□ -0.67
LINC00488-201ENST00000494582 ORAI2Q96SN7 254 aa10.87□□□□□ -0.67
LINC00488-201ENST00000494582 SH3GLB2Q9NR46 395 aa10.87□□□□□ -0.67
LINC00488-201ENST00000494582 CCDC87Q9NVE4 849 aa10.87□□□□□ -0.67
LINC00488-201ENST00000494582 USP40Q9NVE5 1235 aa10.87□□□□□ -0.67
LINC00488-201ENST00000494582 TAS2R14Q9NYV8 317 aa10.87□□□□□ -0.67
LINC00488-201ENST00000494582 MTRF1LQ9UGC7 380 aaKnown RBP10.87□□□□□ -0.67
LINC00488-201ENST00000494582 INTUQ9ULD6 942 aa10.87□□□□□ -0.67
LINC00488-201ENST00000494582 PHTF1Q9UMS5 762 aa10.87□□□□□ -0.67
LINC00488-201ENST00000494582 WTIPA6NIX2 430 aaPredicted RBP10.86□□□□□ -0.67
LINC00488-201ENST00000494582 MARSP56192 900 aaKnown RBP10.86□□□□□ -0.67
LINC00488-201ENST00000494582 JAM2P57087 298 aa10.86□□□□□ -0.67
LINC00488-201ENST00000494582 GALNT17Q6IS24 598 aa10.86□□□□□ -0.67
LINC00488-201ENST00000494582 CCDC137Q6PK04 289 aaKnown RBP10.86□□□□□ -0.67
LINC00488-201ENST00000494582 GLYCTKQ8IVS8 523 aa10.86□□□□□ -0.67
LINC00488-201ENST00000494582 DAGLBQ8NCG7 672 aa10.86□□□□□ -0.67
LINC00488-201ENST00000494582 SLC30A5Q8TAD4 765 aa10.86□□□□□ -0.67
LINC00488-201ENST00000494582 C7orf43Q8WVR3 580 aa10.86□□□□□ -0.67
LINC00488-201ENST00000494582 GJA10Q969M2 543 aa10.86□□□□□ -0.67
LINC00488-201ENST00000494582 PHACTR1Q9C0D0 580 aa10.86□□□□□ -0.67
LINC00488-201ENST00000494582 KCTD10Q9H3F6 313 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms