RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 INO80B-WBP1J3KQ70 363 aa14.61□□□□□ -0.07
ERCC3-209ENST00000494464 ATP2C1P98194 919 aaPredicted RBP14.61□□□□□ -0.07
ERCC3-209ENST00000494464 AMHR2Q16671 573 aa14.61□□□□□ -0.07
ERCC3-209ENST00000494464 PUS10Q3MIT2 529 aaKnown RBP14.61□□□□□ -0.07
ERCC3-209ENST00000494464 UBXN11Q5T124 520 aa14.61□□□□□ -0.07
ERCC3-209ENST00000494464 CDCA2Q69YH5 1023 aaPredicted RBP14.61□□□□□ -0.07
ERCC3-209ENST00000494464 PDE12Q6L8Q7 609 aaKnown RBP14.61□□□□□ -0.07
ERCC3-209ENST00000494464 PADI6Q6TGC4 694 aa14.61□□□□□ -0.07
ERCC3-209ENST00000494464 MRPL10Q7Z7H8 261 aaKnown RBP14.61□□□□□ -0.07
ERCC3-209ENST00000494464 CNNM3Q8NE01 707 aa14.61□□□□□ -0.07
ERCC3-209ENST00000494464 SNX29Q8TEQ0 813 aa14.61□□□□□ -0.07
ERCC3-209ENST00000494464 MRPS27Q92552 414 aaKnown RBP14.61□□□□□ -0.07
ERCC3-209ENST00000494464 LPPQ93052 612 aa14.61□□□□□ -0.07
ERCC3-209ENST00000494464 GPRC5CQ9NQ84 441 aa14.61□□□□□ -0.07
ERCC3-209ENST00000494464 CLDND1Q9NY35 253 aa14.61□□□□□ -0.07
ERCC3-209ENST00000494464 MTMR6Q9Y217 621 aa14.61□□□□□ -0.07
ERCC3-209ENST00000494464 ATP6V1DQ9Y5K8 247 aa14.61□□□□□ -0.07
ERCC3-209ENST00000494464 FSD2A1L4K1 749 aa14.6□□□□□ -0.07
ERCC3-209ENST00000494464 MEIS3P2A8K0S8 358 aa14.6□□□□□ -0.07
ERCC3-209ENST00000494464 FSCN2O14926 492 aa14.6□□□□□ -0.07
ERCC3-209ENST00000494464 CSPG5O95196 566 aa14.6□□□□□ -0.07
ERCC3-209ENST00000494464 F13A1P00488 732 aa14.6□□□□□ -0.07
ERCC3-209ENST00000494464 CYP11B2P19099 503 aa14.6□□□□□ -0.07
ERCC3-209ENST00000494464 NCLP19338 710 aaKnown RBP14.6□□□□□ -0.07
ERCC3-209ENST00000494464 LTBRP36941 435 aa14.6□□□□□ -0.07
ERCC3-209ENST00000494464 NCBP1Q09161 790 aaKnown RBP14.6□□□□□ -0.07
ERCC3-209ENST00000494464 ECM1Q16610 540 aa14.6□□□□□ -0.07
ERCC3-209ENST00000494464 NOMO2Q5JPE7 1267 aa14.6□□□□□ -0.07
ERCC3-209ENST00000494464 LARP1BQ659C4 914 aaKnown RBP14.6□□□□□ -0.07
ERCC3-209ENST00000494464 DTHD1Q6ZMT9 781 aa14.6□□□□□ -0.07
ERCC3-209ENST00000494464 AGMOQ6ZNB7 445 aa14.6□□□□□ -0.07
ERCC3-209ENST00000494464 ADGRD2Q7Z7M1 963 aa14.6□□□□□ -0.07
ERCC3-209ENST00000494464 SLC39A11Q8N1S5 342 aa14.6□□□□□ -0.07
ERCC3-209ENST00000494464 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.6□□□□□ -0.07
ERCC3-209ENST00000494464 PRIMPOLQ96LW4 560 aa14.6□□□□□ -0.07
ERCC3-209ENST00000494464 RSAD1Q9HA92 442 aa14.6□□□□□ -0.07
ERCC3-209ENST00000494464 TBC1D13Q9NVG8 400 aa14.6□□□□□ -0.07
ERCC3-209ENST00000494464 SPG21Q9NZD8 308 aa14.6□□□□□ -0.07
ERCC3-209ENST00000494464 ZMYM2Q9UBW7 1377 aa14.6□□□□□ -0.07
ERCC3-209ENST00000494464 LRRIQ4A6NIV6 560 aa14.6□□□□□ -0.07
ERCC3-209ENST00000494464 TBX10O75333 385 aa14.6□□□□□ -0.07
ERCC3-209ENST00000494464 OFD1O75665 1012 aa14.6□□□□□ -0.07
ERCC3-209ENST00000494464 PBX3P40426 434 aa14.6□□□□□ -0.07
ERCC3-209ENST00000494464 BCAR1P56945 870 aa14.6□□□□□ -0.07
ERCC3-209ENST00000494464 IL17AQ16552 155 aa14.6□□□□□ -0.07
ERCC3-209ENST00000494464 KLHL40Q2TBA0 621 aa14.6□□□□□ -0.07
ERCC3-209ENST00000494464 KRT79Q5XKE5 535 aa14.6□□□□□ -0.07
ERCC3-209ENST00000494464 ARL6IP4Q66PJ3 421 aaKnown RBP14.6□□□□□ -0.07
ERCC3-209ENST00000494464 PPP4R3CPQ6ZMV5 832 aa14.6□□□□□ -0.07
ERCC3-209ENST00000494464 BRAPQ7Z569 592 aa14.6□□□□□ -0.07
ERCC3-209ENST00000494464 EFHBQ8N7U6 833 aa14.6□□□□□ -0.07
ERCC3-209ENST00000494464 TMEM87AQ8NBN3 555 aa14.6□□□□□ -0.07
ERCC3-209ENST00000494464 URGCPQ8TCY9 931 aa14.6□□□□□ -0.07
ERCC3-209ENST00000494464 NECAB3Q96P71 396 aaPredicted RBP14.6□□□□□ -0.07
ERCC3-209ENST00000494464 CSRNP2Q9H175 543 aa14.6□□□□□ -0.07
ERCC3-209ENST00000494464 C2orf40Q9H1Z8 148 aa14.6□□□□□ -0.07
ERCC3-209ENST00000494464 BHMT2Q9H2M3 363 aa14.6□□□□□ -0.07
ERCC3-209ENST00000494464 DDX19AQ9NUU7 478 aaKnown RBP14.6□□□□□ -0.07
ERCC3-209ENST00000494464 PRMT7Q9NVM4 692 aaPredicted RBP14.6□□□□□ -0.07
ERCC3-209ENST00000494464 PUF60Q9UHX1 559 aaKnown RBP14.6□□□□□ -0.07
ERCC3-209ENST00000494464 IPPQ9Y573 584 aa14.6□□□□□ -0.07
ERCC3-209ENST00000494464 GRXCR2A6NFK2 248 aa14.59□□□□□ -0.07
ERCC3-209ENST00000494464 PP2D1A8MPX8 630 aa14.59□□□□□ -0.07
ERCC3-209ENST00000494464 H3BQ06 376 aaPredicted RBP14.59□□□□□ -0.07
ERCC3-209ENST00000494464 INPPL1O15357 1258 aa14.59□□□□□ -0.07
ERCC3-209ENST00000494464 ZC3H11AO75152 810 aaKnown RBP eCLIP14.59□□□□□ -0.07
ERCC3-209ENST00000494464 ARF4P18085 180 aaPredicted RBP14.59□□□□□ -0.07
ERCC3-209ENST00000494464 GTF2F1P35269 517 aaKnown RBP eCLIP14.59□□□□□ -0.07
ERCC3-209ENST00000494464 NAMPTP43490 491 aa14.59□□□□□ -0.07
ERCC3-209ENST00000494464 ALDH7A1P49419 539 aaKnown RBP14.59□□□□□ -0.07
ERCC3-209ENST00000494464 ERVFC1P60507 584 aa14.59□□□□□ -0.07
ERCC3-209ENST00000494464 KRT17Q04695 432 aa14.59□□□□□ -0.07
ERCC3-209ENST00000494464 ADAM15Q13444 863 aa14.59□□□□□ -0.07
ERCC3-209ENST00000494464 PPP2R5AQ15172 486 aa14.59□□□□□ -0.07
ERCC3-209ENST00000494464 FAM187BQ17R55 369 aa14.59□□□□□ -0.07
ERCC3-209ENST00000494464 PTCRAQ6ISU1 281 aaPredicted RBP14.59□□□□□ -0.07
ERCC3-209ENST00000494464 MAEAQ7L5Y9 396 aa14.59□□□□□ -0.07
ERCC3-209ENST00000494464 ZBTB8OSQ8IWT0 167 aa14.59□□□□□ -0.07
ERCC3-209ENST00000494464 KCTD17Q8N5Z5 321 aa14.59□□□□□ -0.07
ERCC3-209ENST00000494464 SMG8Q8ND04 991 aaKnown RBP14.59□□□□□ -0.07
ERCC3-209ENST00000494464 KIFAP3Q92845 792 aa14.59□□□□□ -0.07
ERCC3-209ENST00000494464 CPB2Q96IY4 423 aa14.59□□□□□ -0.07
ERCC3-209ENST00000494464 CDCA3Q99618 268 aaPredicted RBP14.59□□□□□ -0.07
ERCC3-209ENST00000494464 MMTAG2Q9BU76 263 aaKnown RBP14.59□□□□□ -0.07
ERCC3-209ENST00000494464 NGRNQ9NPE2 291 aaKnown RBP14.59□□□□□ -0.07
ERCC3-209ENST00000494464 UBN1Q9NPG3 1134 aa14.59□□□□□ -0.07
ERCC3-209ENST00000494464 LMBRD1Q9NUN5 540 aa14.59□□□□□ -0.07
ERCC3-209ENST00000494464 KANSL3Q9P2N6 904 aa14.59□□□□□ -0.07
ERCC3-209ENST00000494464 KIAA1024Q9UPX6 916 aa14.59□□□□□ -0.07
ERCC3-209ENST00000494464 FAM50BQ9Y247 325 aa14.59□□□□□ -0.07
ERCC3-209ENST00000494464 INPP5FQ9Y2H2 1132 aa14.59□□□□□ -0.07
ERCC3-209ENST00000494464 PCDHGC5Q9Y5F6 944 aa14.59□□□□□ -0.07
ERCC3-209ENST00000494464 TDRD15B5MCY1 1934 aaKnown RBP14.58□□□□□ -0.08
ERCC3-209ENST00000494464 A0A1B0GUA9 196 aa14.58□□□□□ -0.08
ERCC3-209ENST00000494464 LINC01565O15544 149 aa14.58□□□□□ -0.08
ERCC3-209ENST00000494464 EYA4O95677 639 aa14.58□□□□□ -0.08
ERCC3-209ENST00000494464 NRIP1P48552 1158 aa14.58□□□□□ -0.08
ERCC3-209ENST00000494464 DLX2Q07687 328 aaPredicted RBP14.58□□□□□ -0.08
ERCC3-209ENST00000494464 LONRF3Q496Y0 759 aa14.58□□□□□ -0.08
ERCC3-209ENST00000494464 HYIQ5T013 277 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms