RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 TSPAN1O60635 241 aa16.01■□□□□ 0.15
BRCA1-223ENST00000494123 RHOBTB3O94955 611 aa16.01■□□□□ 0.15
BRCA1-223ENST00000494123 FGBP02675 491 aa16.01■□□□□ 0.15
BRCA1-223ENST00000494123 EHHADHQ08426 723 aa16.01■□□□□ 0.15
BRCA1-223ENST00000494123 IKBKEQ14164 716 aa16.01■□□□□ 0.15
BRCA1-223ENST00000494123 KCNB1Q14721 858 aa16.01■□□□□ 0.15
BRCA1-223ENST00000494123 FAM187BQ17R55 369 aa16.01■□□□□ 0.15
BRCA1-223ENST00000494123 ZC2HC1CQ53FD0 456 aaPredicted RBP16.01■□□□□ 0.15
BRCA1-223ENST00000494123 PPP4R3CPQ6ZMV5 832 aa16.01■□□□□ 0.15
BRCA1-223ENST00000494123 BICD1Q96G01 975 aa16.01■□□□□ 0.15
BRCA1-223ENST00000494123 ST6GALNAC4Q9H4F1 302 aa16.01■□□□□ 0.15
BRCA1-223ENST00000494123 AGPAT5Q9NUQ2 364 aa16.01■□□□□ 0.15
BRCA1-223ENST00000494123 TBX20Q9UMR3 447 aa16.01■□□□□ 0.15
BRCA1-223ENST00000494123 PDE4DIPQ5VU43 2346 aa16■□□□□ 0.15
BRCA1-223ENST00000494123 CNTNAP2Q9UHC6 1331 aa16■□□□□ 0.15
BRCA1-223ENST00000494123 RBAK-RBAKDNI3L0D1 243 aa16■□□□□ 0.15
BRCA1-223ENST00000494123 B4GALT5O43286 388 aa16■□□□□ 0.15
BRCA1-223ENST00000494123 MYBP10242 640 aa16■□□□□ 0.15
BRCA1-223ENST00000494123 AXLP30530 894 aa16■□□□□ 0.15
BRCA1-223ENST00000494123 GTF2BQ00403 316 aa16■□□□□ 0.15
BRCA1-223ENST00000494123 AMHR2Q16671 573 aa16■□□□□ 0.15
BRCA1-223ENST00000494123 FAM43BQ6ZT52 329 aaPredicted RBP16■□□□□ 0.15
BRCA1-223ENST00000494123 SYAP1Q96A49 352 aaPredicted RBP16■□□□□ 0.15
BRCA1-223ENST00000494123 HVCN1Q96D96 273 aa16■□□□□ 0.15
BRCA1-223ENST00000494123 CPB2Q96IY4 423 aa16■□□□□ 0.15
BRCA1-223ENST00000494123 MRPL4Q9BYD3 311 aaKnown RBP16■□□□□ 0.15
BRCA1-223ENST00000494123 CHST12Q9NRB3 414 aa16■□□□□ 0.15
BRCA1-223ENST00000494123 CASP5P51878 434 aa15.99■□□□□ 0.15
BRCA1-223ENST00000494123 STK4Q13043 487 aa15.99■□□□□ 0.15
BRCA1-223ENST00000494123 NFKBIBQ15653 356 aa15.99■□□□□ 0.15
BRCA1-223ENST00000494123 SKOR2Q2VWA4 1001 aaPredicted RBP15.99■□□□□ 0.15
BRCA1-223ENST00000494123 TWF2Q6IBS0 349 aaKnown RBP15.99■□□□□ 0.15
BRCA1-223ENST00000494123 NOTUMQ6P988 496 aa15.99■□□□□ 0.15
BRCA1-223ENST00000494123 ZNF365Q70YC5 407 aa15.99■□□□□ 0.15
BRCA1-223ENST00000494123 OTOP2Q7RTS6 562 aa15.99■□□□□ 0.15
BRCA1-223ENST00000494123 TAS1R3Q7RTX0 852 aa15.99■□□□□ 0.15
BRCA1-223ENST00000494123 SPATA20Q8TB22 786 aa15.99■□□□□ 0.15
BRCA1-223ENST00000494123 ACCSQ96QU6 501 aa15.99■□□□□ 0.15
BRCA1-223ENST00000494123 FGFBP2Q9BYJ0 223 aa15.99■□□□□ 0.15
BRCA1-223ENST00000494123 KIAA1468Q9P260 1216 aa15.99■□□□□ 0.15
BRCA1-223ENST00000494123 EXOC7Q9UPT5 735 aa15.99■□□□□ 0.15
BRCA1-223ENST00000494123 TNRC18O15417 2968 aaPredicted RBP15.99■□□□□ 0.15
BRCA1-223ENST00000494123 ZBBXA8MT70 800 aa15.98■□□□□ 0.15
BRCA1-223ENST00000494123 HNRNPDLO14979 420 aaKnown RBP15.98■□□□□ 0.15
BRCA1-223ENST00000494123 EIF3DO15371 548 aaKnown RBP eCLIP15.98■□□□□ 0.15
BRCA1-223ENST00000494123 EFCAB14O75071 495 aa15.98■□□□□ 0.15
BRCA1-223ENST00000494123 BAIAP3O94812 1187 aa15.98■□□□□ 0.15
BRCA1-223ENST00000494123 PRPF6O94906 941 aaKnown RBP15.98■□□□□ 0.15
BRCA1-223ENST00000494123 ARF4P18085 180 aaPredicted RBP15.98■□□□□ 0.15
BRCA1-223ENST00000494123 EPHB4P54760 987 aa15.98■□□□□ 0.15
BRCA1-223ENST00000494123 KLHL40Q2TBA0 621 aa15.98■□□□□ 0.15
BRCA1-223ENST00000494123 CCDC183Q5T5S1 534 aa15.98■□□□□ 0.15
BRCA1-223ENST00000494123 L1TD1Q5T7N2 865 aaKnown RBP15.98■□□□□ 0.15
BRCA1-223ENST00000494123 NT5DC1Q5TFE4 455 aa15.98■□□□□ 0.15
BRCA1-223ENST00000494123 C16orf59Q7L2K0 433 aa15.98■□□□□ 0.15
BRCA1-223ENST00000494123 MAP4K3Q8IVH8 894 aa15.98■□□□□ 0.15
BRCA1-223ENST00000494123 SYCP3Q8IZU3 236 aa15.98■□□□□ 0.15
BRCA1-223ENST00000494123 GLIS3Q8NEA6 775 aa15.98■□□□□ 0.15
BRCA1-223ENST00000494123 KCNN1Q92952 543 aa15.98■□□□□ 0.15
BRCA1-223ENST00000494123 VWCEQ96DN2 955 aa15.98■□□□□ 0.15
BRCA1-223ENST00000494123 ADAM2Q99965 735 aa15.98■□□□□ 0.15
BRCA1-223ENST00000494123 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.98■□□□□ 0.15
BRCA1-223ENST00000494123 GTPBP4Q9BZE4 634 aaKnown RBP15.98■□□□□ 0.15
BRCA1-223ENST00000494123 UBE2OQ9C0C9 1292 aaKnown RBP15.98■□□□□ 0.15
BRCA1-223ENST00000494123 MTIF3Q9H2K0 278 aaKnown RBP15.98■□□□□ 0.15
BRCA1-223ENST00000494123 TMX1Q9H3N1 280 aa15.98■□□□□ 0.15
BRCA1-223ENST00000494123 TMEM206Q9H813 350 aa15.98■□□□□ 0.15
BRCA1-223ENST00000494123 USP20Q9Y2K6 914 aa15.98■□□□□ 0.15
BRCA1-223ENST00000494123 UBE4BO95155 1302 aa15.98■□□□□ 0.15
BRCA1-223ENST00000494123 ABHD14A-ACY1A0A1B0GW23 586 aa15.97■□□□□ 0.15
BRCA1-223ENST00000494123 BIN1O00499 593 aa15.97■□□□□ 0.15
BRCA1-223ENST00000494123 N4BP3O15049 544 aa15.97■□□□□ 0.15
BRCA1-223ENST00000494123 PPP1R37O75864 691 aa15.97■□□□□ 0.15
BRCA1-223ENST00000494123 KIF20AO95235 890 aa15.97■□□□□ 0.15
BRCA1-223ENST00000494123 EDN1P05305 212 aa15.97■□□□□ 0.15
BRCA1-223ENST00000494123 HOXA11P31270 313 aaPredicted RBP15.97■□□□□ 0.15
BRCA1-223ENST00000494123 KCNJ6P48051 423 aa15.97■□□□□ 0.15
BRCA1-223ENST00000494123 SARSP49591 514 aaKnown RBP15.97■□□□□ 0.15
BRCA1-223ENST00000494123 LIG4P49917 911 aa15.97■□□□□ 0.15
BRCA1-223ENST00000494123 TCTN1Q2MV58 587 aa15.97■□□□□ 0.15
BRCA1-223ENST00000494123 TMEM240Q5SV17 173 aa15.97■□□□□ 0.15
BRCA1-223ENST00000494123 ATF7IP2Q5U623 682 aa15.97■□□□□ 0.15
BRCA1-223ENST00000494123 ISM2Q6H9L7 571 aa15.97■□□□□ 0.15
BRCA1-223ENST00000494123 CAVIN1Q6NZI2 390 aaKnown RBP15.97■□□□□ 0.15
BRCA1-223ENST00000494123 KIAA0895Q8NCT3 520 aa15.97■□□□□ 0.15
BRCA1-223ENST00000494123 CCDC51Q96ER9 411 aa15.97■□□□□ 0.15
BRCA1-223ENST00000494123 ADPGKQ9BRR6 497 aa15.97■□□□□ 0.15
BRCA1-223ENST00000494123 TARS2Q9BW92 718 aaKnown RBP15.97■□□□□ 0.15
BRCA1-223ENST00000494123 STRA6Q9BX79 667 aa15.97■□□□□ 0.15
BRCA1-223ENST00000494123 MAN1B1Q9UKM7 699 aa15.97■□□□□ 0.15
BRCA1-223ENST00000494123 GDAQ9Y2T3 454 aa15.97■□□□□ 0.15
BRCA1-223ENST00000494123 MICAL3Q7RTP6 2002 aa15.97■□□□□ 0.15
BRCA1-223ENST00000494123 IBSPP21815 317 aaPredicted RBP15.97■□□□□ 0.15
BRCA1-223ENST00000494123 MATR3P43243 847 aaKnown RBP eCLIP15.97■□□□□ 0.15
BRCA1-223ENST00000494123 ZNF658Q5TYW1 1059 aaPredicted RBP15.97■□□□□ 0.15
BRCA1-223ENST00000494123 ZPBP2Q6X784 338 aa15.97■□□□□ 0.15
BRCA1-223ENST00000494123 EPM2AIP1Q7L775 607 aaPredicted RBP15.97■□□□□ 0.15
BRCA1-223ENST00000494123 APBB1IPQ7Z5R6 666 aaPredicted RBP15.97■□□□□ 0.15
BRCA1-223ENST00000494123 CDR2LQ86X02 465 aaPredicted RBP15.97■□□□□ 0.15
BRCA1-223ENST00000494123 MYOCDQ8IZQ8 938 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms