RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 LETM1O95202 739 aaPredicted RBP3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 CYP1A1P04798 512 aaPredicted RBP3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 TRIM27P14373 513 aa3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 ZSCAN23Q3MJ62 389 aa3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 CPZQ66K79 652 aa3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 MTDHQ86UE4 582 aaKnown RBP3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 STPG3Q8N7X2 389 aa3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 UHMK1Q8TAS1 419 aaKnown RBP3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 KIAA1524Q8TCG1 905 aa3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 IGDCC4Q8TDY8 1250 aa3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 DCAF4Q8WV16 495 aa3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 RUNDC1Q96C34 613 aa3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 SNTG2Q9NY99 539 aa3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 TSC2P49815 1807 aa3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 BAG4O95429 457 aaKnown RBP3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 IL18BPO95998 194 aa3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 PYGMP11217 842 aa3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 GSCP56915 257 aaPredicted RBP3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 GABPB1Q06547 395 aaPredicted RBP3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 IFRD2Q12894 506 aaPredicted RBP3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 PAN2Q504Q3 1202 aaKnown RBP3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 SASS6Q6UVJ0 657 aa3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 CISD2Q8N5K1 135 aaKnown RBP3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 PRAM1Q96QH2 718 aa3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 PSMD1Q99460 953 aa3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 TACO1Q9BSH4 297 aaKnown RBP3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 HSD3B7Q9H2F3 369 aa3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 COQ6Q9Y2Z9 468 aa3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 MAP3K5Q99683 1374 aa3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 USP6P35125 1406 aa3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 GOLGA6L3A6NEY3 463 aa3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 FAM90A27PA6NNH2 459 aa3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 K7ESM1 405 aa3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 PLIN1O60240 522 aa3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 KLHL18O94889 574 aa3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 RASGRP1O95267 797 aa3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 CRTAMO95727 393 aa3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 AMY2AP04746 511 aa3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 KRT15P19012 456 aa3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 AMY2BP19961 511 aa3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 PFKPQ01813 784 aa3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 SERINC3Q13530 473 aa3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 TRMT10BQ6PF06 316 aaKnown RBP3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 KCTD1Q719H9 257 aa3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 OSTM1Q86WC4 334 aa3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 PTRH1Q86Y79 214 aaKnown RBP3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 LRRC47Q8N1G4 583 aaKnown RBP3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 DTX3Q8N9I9 347 aa3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 CARD11Q9BXL7 1154 aa3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 DCTPP1Q9H773 170 aa3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 SLC52A2Q9HAB3 445 aa3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 PPP4R1LQ9P1A2 415 aa3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 ZNF536O15090 1300 aa3.07□□□□□ -1.92
CDC42EP3-205ENST00000494083 INSRRP14616 1297 aa3.06□□□□□ -1.92
CDC42EP3-205ENST00000494083 ATP2B1P20020 1258 aa3.06□□□□□ -1.92
CDC42EP3-205ENST00000494083 MC4RP32245 332 aa3.06□□□□□ -1.92
CDC42EP3-205ENST00000494083 ANAPC15P60006 121 aa3.06□□□□□ -1.92
CDC42EP3-205ENST00000494083 GPR85P60893 370 aa3.06□□□□□ -1.92
CDC42EP3-205ENST00000494083 TMF1P82094 1093 aa3.06□□□□□ -1.92
CDC42EP3-205ENST00000494083 ICAM4Q14773 271 aa3.06□□□□□ -1.92
CDC42EP3-205ENST00000494083 ZFYVE27Q5T4F4 411 aa3.06□□□□□ -1.92
CDC42EP3-205ENST00000494083 TTLL6Q8N841 843 aa3.06□□□□□ -1.92
CDC42EP3-205ENST00000494083 PCDH19Q8TAB3 1148 aa3.06□□□□□ -1.92
CDC42EP3-205ENST00000494083 GPATCH3Q96I76 525 aa3.06□□□□□ -1.92
CDC42EP3-205ENST00000494083 LCORQ96JN0 433 aaPredicted RBP3.06□□□□□ -1.92
CDC42EP3-205ENST00000494083 CLIC6Q96NY7 704 aa3.06□□□□□ -1.92
CDC42EP3-205ENST00000494083 CDC6Q99741 560 aa3.06□□□□□ -1.92
CDC42EP3-205ENST00000494083 PSD3Q9NYI0 1048 aa3.06□□□□□ -1.92
CDC42EP3-205ENST00000494083 GREB1Q4ZG55 1949 aa3.06□□□□□ -1.92
CDC42EP3-205ENST00000494083 COL11A2P13942 1736 aaPredicted RBP3.06□□□□□ -1.92
CDC42EP3-205ENST00000494083 U2SURPO15042 1029 aaKnown RBP3.06□□□□□ -1.92
CDC42EP3-205ENST00000494083 B4GALT4O60513 344 aa3.06□□□□□ -1.92
CDC42EP3-205ENST00000494083 ADRB1P08588 477 aa3.06□□□□□ -1.92
CDC42EP3-205ENST00000494083 ZNF888P0CJ79 500 aaPredicted RBP3.06□□□□□ -1.92
CDC42EP3-205ENST00000494083 JAM2P57087 298 aa3.06□□□□□ -1.92
CDC42EP3-205ENST00000494083 RASGRF1Q13972 1273 aa3.06□□□□□ -1.92
CDC42EP3-205ENST00000494083 HABP4Q5JVS0 413 aaKnown RBP3.06□□□□□ -1.92
CDC42EP3-205ENST00000494083 VASNQ6EMK4 673 aa3.06□□□□□ -1.92
CDC42EP3-205ENST00000494083 GNRHR2Q96P88 292 aa3.06□□□□□ -1.92
CDC42EP3-205ENST00000494083 DEPDC7Q96QD5 511 aa3.06□□□□□ -1.92
CDC42EP3-205ENST00000494083 AGXT2Q9BYV1 514 aa3.06□□□□□ -1.92
CDC42EP3-205ENST00000494083 PIF1Q9H611 641 aa3.06□□□□□ -1.92
CDC42EP3-205ENST00000494083 SMPD4Q9NXE4 827 aa3.06□□□□□ -1.92
CDC42EP3-205ENST00000494083 TRBV23-1A0A0A0MS06 115 aa3.06□□□□□ -1.92
CDC42EP3-205ENST00000494083 PLSCR1O15162 318 aa3.06□□□□□ -1.92
CDC42EP3-205ENST00000494083 GPR42O15529 346 aa3.06□□□□□ -1.92
CDC42EP3-205ENST00000494083 FAHP16930 419 aa3.06□□□□□ -1.92
CDC42EP3-205ENST00000494083 GUCY1A3Q02108 690 aa3.06□□□□□ -1.92
CDC42EP3-205ENST00000494083 NCBP1Q09161 790 aaKnown RBP3.06□□□□□ -1.92
CDC42EP3-205ENST00000494083 PUM1Q14671 1186 aaKnown RBP eCLIP3.06□□□□□ -1.92
CDC42EP3-205ENST00000494083 CHRNA2Q15822 529 aa3.06□□□□□ -1.92
CDC42EP3-205ENST00000494083 ABHD17CQ6PCB6 329 aa3.06□□□□□ -1.92
CDC42EP3-205ENST00000494083 ARHGAP36Q6ZRI8 547 aa3.06□□□□□ -1.92
CDC42EP3-205ENST00000494083 KBTBD2Q8IY47 623 aa3.06□□□□□ -1.92
CDC42EP3-205ENST00000494083 ZBTB38Q8NAP3 1195 aaPredicted RBP3.06□□□□□ -1.92
CDC42EP3-205ENST00000494083 IPO4Q8TEX9 1081 aaKnown RBP3.06□□□□□ -1.92
CDC42EP3-205ENST00000494083 DNAJC7Q99615 494 aa3.06□□□□□ -1.92
CDC42EP3-205ENST00000494083 KANSL2Q9H9L4 492 aa3.06□□□□□ -1.92
CDC42EP3-205ENST00000494083 SMURF1Q9HCE7 757 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms