RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 TRIM11Q96F44 468 aa12.42□□□□□ -0.42
RFC4-214ENST00000494047 MS4A14Q96JA4 679 aa12.42□□□□□ -0.42
RFC4-214ENST00000494047 PRMT6Q96LA8 375 aaPredicted RBP12.42□□□□□ -0.42
RFC4-214ENST00000494047 GDAP1L1Q96MZ0 367 aa12.42□□□□□ -0.42
RFC4-214ENST00000494047 ACCSQ96QU6 501 aa12.42□□□□□ -0.42
RFC4-214ENST00000494047 BEGAINQ9BUH8 593 aa12.42□□□□□ -0.42
RFC4-214ENST00000494047 WNT8AQ9H1J5 351 aa12.42□□□□□ -0.42
RFC4-214ENST00000494047 RANBP17Q9H2T7 1088 aaKnown RBP12.42□□□□□ -0.42
RFC4-214ENST00000494047 DNAJC18Q9H819 358 aa12.42□□□□□ -0.42
RFC4-214ENST00000494047 AGPAT3Q9NRZ7 376 aa12.42□□□□□ -0.42
RFC4-214ENST00000494047 TMEM51Q9NW97 253 aa12.42□□□□□ -0.42
RFC4-214ENST00000494047 FEM1BQ9UK73 627 aa12.42□□□□□ -0.42
RFC4-214ENST00000494047 TMX2Q9Y320 296 aa12.42□□□□□ -0.42
RFC4-214ENST00000494047 ZMYM2Q9UBW7 1377 aa12.41□□□□□ -0.42
RFC4-214ENST00000494047 DDX3XO00571 662 aaKnown RBP eCLIP12.41□□□□□ -0.426e-13■■■□□ 17.4
RFC4-214ENST00000494047 NKRFO15226 690 aaKnown RBP eCLIP12.41□□□□□ -0.42
RFC4-214ENST00000494047 TGFB1I1O43294 461 aa12.41□□□□□ -0.42
RFC4-214ENST00000494047 TBC1D12O60347 775 aa12.41□□□□□ -0.42
RFC4-214ENST00000494047 PPFIA2O75334 1257 aa12.41□□□□□ -0.42
RFC4-214ENST00000494047 GTF2H1P32780 548 aa12.41□□□□□ -0.42
RFC4-214ENST00000494047 STAT3P40763 770 aa12.41□□□□□ -0.42
RFC4-214ENST00000494047 FNTAP49354 379 aa12.41□□□□□ -0.42
RFC4-214ENST00000494047 CASP5P51878 434 aa12.41□□□□□ -0.42
RFC4-214ENST00000494047 GALCP54803 685 aa12.41□□□□□ -0.42
RFC4-214ENST00000494047 ERVK-9P63128 1117 aa12.41□□□□□ -0.42
RFC4-214ENST00000494047 PPATQ06203 517 aa12.41□□□□□ -0.42
RFC4-214ENST00000494047 ADCY2Q08462 1091 aa12.41□□□□□ -0.42
RFC4-214ENST00000494047 IFFO1Q0D2I5 559 aa12.41□□□□□ -0.42
RFC4-214ENST00000494047 ODR4Q5SWX8 454 aa12.41□□□□□ -0.42
RFC4-214ENST00000494047 CYP4F22Q6NT55 531 aa12.41□□□□□ -0.42
RFC4-214ENST00000494047 CYFIP1Q7L576 1253 aa12.41□□□□□ -0.42
RFC4-214ENST00000494047 TAOK1Q7L7X3 1001 aa12.41□□□□□ -0.42
RFC4-214ENST00000494047 TMC3Q7Z5M5 1100 aa12.41□□□□□ -0.42
RFC4-214ENST00000494047 NLRP14Q86W24 1093 aa12.41□□□□□ -0.42
RFC4-214ENST00000494047 KLHL7Q8IXQ5 586 aa12.41□□□□□ -0.42
RFC4-214ENST00000494047 SYCP3Q8IZU3 236 aa12.41□□□□□ -0.42
RFC4-214ENST00000494047 U2AF1L4Q8WU68 220 aaKnown RBP12.41□□□□□ -0.42
RFC4-214ENST00000494047 BBXQ8WY36 941 aaPredicted RBP12.41□□□□□ -0.42
RFC4-214ENST00000494047 DHX38Q92620 1227 aaKnown RBP12.41□□□□□ -0.42
RFC4-214ENST00000494047 KIFAP3Q92845 792 aa12.41□□□□□ -0.42
RFC4-214ENST00000494047 ARL8AQ96BM9 186 aa12.41□□□□□ -0.42
RFC4-214ENST00000494047 PGM2Q96G03 612 aa12.41□□□□□ -0.42
RFC4-214ENST00000494047 CEP89Q96ST8 783 aa12.41□□□□□ -0.42
RFC4-214ENST00000494047 PLCD4Q9BRC7 762 aa12.41□□□□□ -0.42
RFC4-214ENST00000494047 SYT11Q9BT88 431 aa12.41□□□□□ -0.42
RFC4-214ENST00000494047 TMEM109Q9BVC6 243 aa12.41□□□□□ -0.42
RFC4-214ENST00000494047 RUSC1Q9BVN2 902 aa12.41□□□□□ -0.42
RFC4-214ENST00000494047 NSRP1Q9H0G5 558 aaKnown RBP12.41□□□□□ -0.42
RFC4-214ENST00000494047 INTS2Q9H0H0 1204 aaKnown RBP12.41□□□□□ -0.42
RFC4-214ENST00000494047 C17orf75Q9HAS0 396 aa12.41□□□□□ -0.42
RFC4-214ENST00000494047 WBP1LQ9NX94 342 aa12.41□□□□□ -0.42
RFC4-214ENST00000494047 UVRAGQ9P2Y5 699 aa12.41□□□□□ -0.42
RFC4-214ENST00000494047 DNAJC12Q9UKB3 198 aa12.41□□□□□ -0.42
RFC4-214ENST00000494047 PRR12Q9ULL5 1215 aa12.41□□□□□ -0.42
RFC4-214ENST00000494047 THSD7BQ9C0I4 1608 aa12.4□□□□□ -0.42
RFC4-214ENST00000494047 PCNTO95613 3336 aa12.4□□□□□ -0.42
RFC4-214ENST00000494047 NPHP3-ACAD11A0A0J9YXS1 232 aa12.4□□□□□ -0.42
RFC4-214ENST00000494047 H0YHG0 523 aa12.4□□□□□ -0.42
RFC4-214ENST00000494047 CA12O43570 354 aa12.4□□□□□ -0.42
RFC4-214ENST00000494047 RAD21O60216 631 aa12.4□□□□□ -0.42
RFC4-214ENST00000494047 EXOC3O60645 756 aa12.4□□□□□ -0.42
RFC4-214ENST00000494047 PHF2O75151 1096 aa12.4□□□□□ -0.42
RFC4-214ENST00000494047 RTN2O75298 545 aa12.4□□□□□ -0.42
RFC4-214ENST00000494047 KRT14P02533 472 aa12.4□□□□□ -0.42
RFC4-214ENST00000494047 ZBTB48P10074 688 aaPredicted RBP12.4□□□□□ -0.42
RFC4-214ENST00000494047 HOXD13P35453 343 aa12.4□□□□□ -0.42
RFC4-214ENST00000494047 DR1Q01658 176 aa12.4□□□□□ -0.42
RFC4-214ENST00000494047 CAV1Q03135 178 aa12.4□□□□□ -0.42
RFC4-214ENST00000494047 NFIAQ12857 509 aa12.4□□□□□ -0.42
RFC4-214ENST00000494047 DRAP1Q14919 205 aaPredicted RBP12.4□□□□□ -0.42
RFC4-214ENST00000494047 SPDYE2Q495Y8 402 aa12.4□□□□□ -0.42
RFC4-214ENST00000494047 ODF2Q5BJF6 829 aa12.4□□□□□ -0.42
RFC4-214ENST00000494047 NAA35Q5VZE5 725 aa12.4□□□□□ -0.42
RFC4-214ENST00000494047 XRRA1Q6P2D8 792 aa12.4□□□□□ -0.42
RFC4-214ENST00000494047 ANKS4BQ8N8V4 417 aa12.4□□□□□ -0.42
RFC4-214ENST00000494047 GJA10Q969M2 543 aa12.4□□□□□ -0.42
RFC4-214ENST00000494047 RNPC3Q96LT9 517 aaKnown RBP12.4□□□□□ -0.42
RFC4-214ENST00000494047 ERP44Q9BS26 406 aa12.4□□□□□ -0.42
RFC4-214ENST00000494047 ZNF577Q9BSK1 485 aa12.4□□□□□ -0.42
RFC4-214ENST00000494047 PACSIN1Q9BY11 444 aa12.4□□□□□ -0.42
RFC4-214ENST00000494047 FGFBP2Q9BYJ0 223 aa12.4□□□□□ -0.42
RFC4-214ENST00000494047 HOMER3Q9NSC5 361 aa12.4□□□□□ -0.42
RFC4-214ENST00000494047 TBC1D22BQ9NU19 505 aa12.4□□□□□ -0.42
RFC4-214ENST00000494047 FAM198AQ9UFP1 575 aa12.4□□□□□ -0.42
RFC4-214ENST00000494047 PCYOX1Q9UHG3 505 aa12.4□□□□□ -0.42
RFC4-214ENST00000494047 GMNCA6NCL1 334 aa12.39□□□□□ -0.43
RFC4-214ENST00000494047 C5orf60A6NFR6 353 aa12.39□□□□□ -0.43
RFC4-214ENST00000494047 MEIS1O00470 390 aa12.39□□□□□ -0.43
RFC4-214ENST00000494047 KIAA0391O15091 583 aaKnown RBP12.39□□□□□ -0.43
RFC4-214ENST00000494047 ZC3H11AO75152 810 aaKnown RBP eCLIP12.39□□□□□ -0.43
RFC4-214ENST00000494047 SLITRK3O94933 977 aa12.39□□□□□ -0.43
RFC4-214ENST00000494047 FGGP02679 453 aa12.39□□□□□ -0.43
RFC4-214ENST00000494047 P4HBP07237 508 aaKnown RBP12.39□□□□□ -0.43
RFC4-214ENST00000494047 SFNP31947 248 aa12.39□□□□□ -0.43
RFC4-214ENST00000494047 ZNF157P51786 506 aaPredicted RBP12.39□□□□□ -0.43
RFC4-214ENST00000494047 GUCY2FP51841 1108 aa12.39□□□□□ -0.43
RFC4-214ENST00000494047 GPC5P78333 572 aa12.39□□□□□ -0.43
RFC4-214ENST00000494047 CACNB1Q02641 598 aaPredicted RBP12.39□□□□□ -0.43
RFC4-214ENST00000494047 MAPK7Q13164 816 aa12.39□□□□□ -0.43
RFC4-214ENST00000494047 PDCLQ13371 301 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms