RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 INO80B-WBP1J3KQ70 363 aa12.5□□□□□ -0.41
MCF2L-231ENST00000494043 HNRNPDLO14979 420 aaKnown RBP12.5□□□□□ -0.41
MCF2L-231ENST00000494043 FGFR1OPO95684 399 aaKnown RBP12.5□□□□□ -0.41
MCF2L-231ENST00000494043 NR3C1P04150 777 aa12.5□□□□□ -0.41
MCF2L-231ENST00000494043 NR2F2P24468 414 aa12.5□□□□□ -0.41
MCF2L-231ENST00000494043 CDK7P50613 346 aa12.5□□□□□ -0.41
MCF2L-231ENST00000494043 TMEM62Q0P6H9 643 aa12.5□□□□□ -0.41
MCF2L-231ENST00000494043 MAPK6Q16659 721 aa12.5□□□□□ -0.41
MCF2L-231ENST00000494043 KIZQ2M2Z5 673 aa12.5□□□□□ -0.41
MCF2L-231ENST00000494043 SRGAP1Q7Z6B7 1085 aa12.5□□□□□ -0.41
MCF2L-231ENST00000494043 RPAINQ86UA6 219 aa12.5□□□□□ -0.41
MCF2L-231ENST00000494043 C12orf56Q8IXR9 622 aa12.5□□□□□ -0.41
MCF2L-231ENST00000494043 ANKLE1Q8NAG6 615 aa12.5□□□□□ -0.41
MCF2L-231ENST00000494043 WNT8BQ93098 351 aa12.5□□□□□ -0.41
MCF2L-231ENST00000494043 BICD1Q96G01 975 aa12.5□□□□□ -0.41
MCF2L-231ENST00000494043 CEP63Q96MT8 703 aa12.5□□□□□ -0.41
MCF2L-231ENST00000494043 SRRTQ9BXP5 876 aaKnown RBP12.5□□□□□ -0.41
MCF2L-231ENST00000494043 MRPL4Q9BYD3 311 aaKnown RBP12.5□□□□□ -0.41
MCF2L-231ENST00000494043 GCOM2Q9BZD3 368 aaPredicted RBP12.5□□□□□ -0.41
MCF2L-231ENST00000494043 INO80BQ9C086 356 aaPredicted RBP12.5□□□□□ -0.41
MCF2L-231ENST00000494043 FZD8Q9H461 694 aa12.5□□□□□ -0.41
MCF2L-231ENST00000494043 MINDY3Q9H8M7 445 aa12.5□□□□□ -0.41
MCF2L-231ENST00000494043 PRMT7Q9NVM4 692 aaPredicted RBP12.5□□□□□ -0.41
MCF2L-231ENST00000494043 NOD1Q9Y239 953 aa12.5□□□□□ -0.41
MCF2L-231ENST00000494043 TRIP12Q14669 1992 aaPredicted RBP12.5□□□□□ -0.41
MCF2L-231ENST00000494043 TISP43B9A030 160 aa12.49□□□□□ -0.41
MCF2L-231ENST00000494043 ANKRD63C9JTQ0 380 aa12.49□□□□□ -0.41
MCF2L-231ENST00000494043 ACKR2O00590 384 aa12.49□□□□□ -0.41
MCF2L-231ENST00000494043 CETN3O15182 167 aa12.49□□□□□ -0.41
MCF2L-231ENST00000494043 CLIC2O15247 247 aa12.49□□□□□ -0.41
MCF2L-231ENST00000494043 EDN1P05305 212 aa12.49□□□□□ -0.41
MCF2L-231ENST00000494043 IQCF3P0C7M6 154 aa12.49□□□□□ -0.41
MCF2L-231ENST00000494043 ATP1A3P13637 1013 aa12.49□□□□□ -0.41
MCF2L-231ENST00000494043 DARSP14868 501 aaKnown RBP12.49□□□□□ -0.41
MCF2L-231ENST00000494043 CAPN2P17655 700 aa12.49□□□□□ -0.41
MCF2L-231ENST00000494043 RPL13P26373 211 aaKnown RBP12.49□□□□□ -0.41
MCF2L-231ENST00000494043 LIG4P49917 911 aa12.49□□□□□ -0.41
MCF2L-231ENST00000494043 MRPS6P82932 125 aaKnown RBP12.49□□□□□ -0.41
MCF2L-231ENST00000494043 MYBPC2Q14324 1141 aa12.49□□□□□ -0.41
MCF2L-231ENST00000494043 AMHR2Q16671 573 aa12.49□□□□□ -0.41
MCF2L-231ENST00000494043 FAM187BQ17R55 369 aa12.49□□□□□ -0.41
MCF2L-231ENST00000494043 TRIM71Q2Q1W2 868 aaKnown RBP12.49□□□□□ -0.41
MCF2L-231ENST00000494043 HSP90AA4PQ58FG1 418 aa12.49□□□□□ -0.41
MCF2L-231ENST00000494043 SLC39A4Q6P5W5 647 aa12.49□□□□□ -0.41
MCF2L-231ENST00000494043 ZPBP2Q6X784 338 aa12.49□□□□□ -0.41
MCF2L-231ENST00000494043 IRF2BP1Q8IU81 584 aa12.49□□□□□ -0.41
MCF2L-231ENST00000494043 SLC9A9Q8IVB4 645 aa12.49□□□□□ -0.41
MCF2L-231ENST00000494043 FAM114A1Q8IWE2 563 aa12.49□□□□□ -0.41
MCF2L-231ENST00000494043 TMEM174Q8WUU8 243 aa12.49□□□□□ -0.41
MCF2L-231ENST00000494043 DHX38Q92620 1227 aaKnown RBP12.49□□□□□ -0.41
MCF2L-231ENST00000494043 OSMRQ99650 979 aa12.49□□□□□ -0.41
MCF2L-231ENST00000494043 TMEM106CQ9BVX2 250 aa12.49□□□□□ -0.41
MCF2L-231ENST00000494043 TARS2Q9BW92 718 aaKnown RBP12.49□□□□□ -0.41
MCF2L-231ENST00000494043 SENP6Q9GZR1 1112 aaPredicted RBP12.49□□□□□ -0.41
MCF2L-231ENST00000494043 TRPV6Q9H1D0 765 aa12.49□□□□□ -0.41
MCF2L-231ENST00000494043 CDHR5Q9HBB8 845 aa12.49□□□□□ -0.41
MCF2L-231ENST00000494043 TRPV2Q9Y5S1 764 aa12.49□□□□□ -0.41
MCF2L-231ENST00000494043 CNTNAP2Q9UHC6 1331 aa12.48□□□□□ -0.41
MCF2L-231ENST00000494043 TTLL13PA6NNM8 815 aa12.48□□□□□ -0.41
MCF2L-231ENST00000494043 KCNJ18B7U540 433 aa12.48□□□□□ -0.41
MCF2L-231ENST00000494043 M0QZ92 97 aa12.48□□□□□ -0.41
MCF2L-231ENST00000494043 SLC16A3O15427 465 aaKnown RBP12.48□□□□□ -0.41
MCF2L-231ENST00000494043 B4GALT4O60513 344 aa12.48□□□□□ -0.41
MCF2L-231ENST00000494043 CAND2O75155 1236 aa12.48□□□□□ -0.41
MCF2L-231ENST00000494043 CSDE1O75534 798 aaKnown RBP12.48□□□□□ -0.41
MCF2L-231ENST00000494043 COL6A1P12109 1028 aa12.48□□□□□ -0.41
MCF2L-231ENST00000494043 ADSSP30520 456 aa12.48□□□□□ -0.41
MCF2L-231ENST00000494043 CRYBB1P53674 252 aaPredicted RBP12.48□□□□□ -0.41
MCF2L-231ENST00000494043 SPAG1Q07617 926 aa12.48□□□□□ -0.41
MCF2L-231ENST00000494043 MGAT3Q09327 533 aa12.48□□□□□ -0.41
MCF2L-231ENST00000494043 ADAM9Q13443 819 aa12.48□□□□□ -0.41
MCF2L-231ENST00000494043 PRPF4BQ13523 1007 aaKnown RBP12.48□□□□□ -0.41
MCF2L-231ENST00000494043 KCNJ12Q14500 433 aa12.48□□□□□ -0.41
MCF2L-231ENST00000494043 SNX17Q15036 470 aa12.48□□□□□ -0.41
MCF2L-231ENST00000494043 ARMCX5Q6P1M9 558 aa12.48□□□□□ -0.41
MCF2L-231ENST00000494043 SARM1Q6SZW1 724 aa12.48□□□□□ -0.41
MCF2L-231ENST00000494043 FILIP1Q7Z7B0 1213 aa12.48□□□□□ -0.41
MCF2L-231ENST00000494043 DIS3LQ8TF46 1054 aaKnown RBP12.48□□□□□ -0.41
MCF2L-231ENST00000494043 EEF2KMTQ96G04 330 aa12.48□□□□□ -0.41
MCF2L-231ENST00000494043 CNOT6LQ96LI5 555 aaKnown RBP12.48□□□□□ -0.41
MCF2L-231ENST00000494043 PRIMPOLQ96LW4 560 aa12.48□□□□□ -0.41
MCF2L-231ENST00000494043 CBWD1Q9BRT8 395 aa12.48□□□□□ -0.41
MCF2L-231ENST00000494043 CELF4Q9BZC1 486 aaKnown RBP12.48□□□□□ -0.41
MCF2L-231ENST00000494043 DMAC2Q9NW81 257 aa12.48□□□□□ -0.41
MCF2L-231ENST00000494043 MAGEC2Q9UBF1 373 aaPredicted RBP12.48□□□□□ -0.41
MCF2L-231ENST00000494043 GINS2Q9Y248 185 aa12.48□□□□□ -0.41
MCF2L-231ENST00000494043 USP20Q9Y2K6 914 aa12.48□□□□□ -0.41
MCF2L-231ENST00000494043 CDY2AQ9Y6F7 541 aa12.48□□□□□ -0.41
MCF2L-231ENST00000494043 STYXL1Q9Y6J8 313 aa12.48□□□□□ -0.41
MCF2L-231ENST00000494043 MROH7Q68CQ1 1323 aa12.47□□□□□ -0.41
MCF2L-231ENST00000494043 B4GALT5O43286 388 aa12.47□□□□□ -0.41
MCF2L-231ENST00000494043 AP5Z1O43299 807 aa12.47□□□□□ -0.41
MCF2L-231ENST00000494043 GNA14O95837 355 aa12.47□□□□□ -0.41
MCF2L-231ENST00000494043 CDK11BP21127 795 aaKnown RBP12.47□□□□□ -0.41
MCF2L-231ENST00000494043 GARTP22102 1010 aa12.47□□□□□ -0.41
MCF2L-231ENST00000494043 EIF4BP23588 611 aaKnown RBP12.47□□□□□ -0.41
MCF2L-231ENST00000494043 EEF1GP26641 437 aaKnown RBP12.47□□□□□ -0.41
MCF2L-231ENST00000494043 THPOP40225 353 aa12.47□□□□□ -0.41
MCF2L-231ENST00000494043 CYP2J2P51589 502 aa12.47□□□□□ -0.41
MCF2L-231ENST00000494043 PCBP1Q15365 356 aaKnown RBP eCLIP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms