RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 CDCA2Q69YH5 1023 aaPredicted RBP12.9□□□□□ -0.34
UBA3-211ENST00000493957 SHC4Q6S5L8 630 aa12.9□□□□□ -0.34
UBA3-211ENST00000493957 SLC24A5Q71RS6 500 aa12.9□□□□□ -0.34
UBA3-211ENST00000493957 GPBP1Q86WP2 473 aa12.9□□□□□ -0.34
UBA3-211ENST00000493957 NPAS4Q8IUM7 802 aa12.9□□□□□ -0.34
UBA3-211ENST00000493957 RASSF8Q8NHQ8 419 aa12.9□□□□□ -0.34
UBA3-211ENST00000493957 MYLIPQ8WY64 445 aa12.9□□□□□ -0.34
UBA3-211ENST00000493957 RAD54LQ92698 747 aa12.9□□□□□ -0.34
UBA3-211ENST00000493957 CPB2Q96IY4 423 aa12.9□□□□□ -0.34
UBA3-211ENST00000493957 INO80BQ9C086 356 aaPredicted RBP12.9□□□□□ -0.34
UBA3-211ENST00000493957 PRDM12Q9H4Q4 367 aa12.9□□□□□ -0.34
UBA3-211ENST00000493957 C1orf112Q9NSG2 853 aa12.9□□□□□ -0.34
UBA3-211ENST00000493957 AGPAT5Q9NUQ2 364 aa12.9□□□□□ -0.34
UBA3-211ENST00000493957 MTUS1Q9ULD2 1270 aa12.9□□□□□ -0.34
UBA3-211ENST00000493957 INSL6Q9Y581 213 aa12.9□□□□□ -0.34
UBA3-211ENST00000493957 MEIS3P2A8K0S8 358 aa12.89□□□□□ -0.35
UBA3-211ENST00000493957 SLC26A4O43511 780 aa12.89□□□□□ -0.35
UBA3-211ENST00000493957 CUTAO60888 179 aa12.89□□□□□ -0.35
UBA3-211ENST00000493957 LINC00271P0C7V0 271 aa12.89□□□□□ -0.35
UBA3-211ENST00000493957 NCLP19338 710 aaKnown RBP12.89□□□□□ -0.35
UBA3-211ENST00000493957 PEX3P56589 373 aa12.89□□□□□ -0.35
UBA3-211ENST00000493957 FAM189BP81408 668 aa12.89□□□□□ -0.35
UBA3-211ENST00000493957 LSM11P83369 360 aaKnown RBP eCLIP12.89□□□□□ -0.35
UBA3-211ENST00000493957 ARSIQ5FYB1 569 aa12.89□□□□□ -0.35
UBA3-211ENST00000493957 CDR2LQ86X02 465 aaPredicted RBP12.89□□□□□ -0.35
UBA3-211ENST00000493957 ECHDC2Q86YB7 292 aa12.89□□□□□ -0.35
UBA3-211ENST00000493957 PDILTQ8N807 584 aa12.89□□□□□ -0.35
UBA3-211ENST00000493957 RNF169Q8NCN4 708 aa12.89□□□□□ -0.35
UBA3-211ENST00000493957 ARNTL2Q8WYA1 636 aa12.89□□□□□ -0.35
UBA3-211ENST00000493957 LPPQ93052 612 aa12.89□□□□□ -0.35
UBA3-211ENST00000493957 ZNF689Q96CS4 500 aaPredicted RBP12.89□□□□□ -0.35
UBA3-211ENST00000493957 CDX2Q99626 313 aaPredicted RBP12.89□□□□□ -0.35
UBA3-211ENST00000493957 C17orf80Q9BSJ5 609 aa12.89□□□□□ -0.35
UBA3-211ENST00000493957 CCDC113Q9H0I3 377 aa12.89□□□□□ -0.35
UBA3-211ENST00000493957 PCDHA7Q9UN72 937 aa12.89□□□□□ -0.35
UBA3-211ENST00000493957 ANK1P16157 1881 aa12.89□□□□□ -0.35
UBA3-211ENST00000493957 ERLIN2O94905 339 aa12.88□□□□□ -0.35
UBA3-211ENST00000493957 ZSCAN20P17040 1043 aaPredicted RBP12.88□□□□□ -0.35
UBA3-211ENST00000493957 ARF4P18085 180 aaPredicted RBP12.88□□□□□ -0.35
UBA3-211ENST00000493957 LIG1P18858 919 aa12.88□□□□□ -0.35
UBA3-211ENST00000493957 GUCY2CP25092 1073 aa12.88□□□□□ -0.35
UBA3-211ENST00000493957 NAMPTP43490 491 aa12.88□□□□□ -0.35
UBA3-211ENST00000493957 NPTX2P47972 431 aa12.88□□□□□ -0.35
UBA3-211ENST00000493957 POU5F1BQ06416 359 aa12.88□□□□□ -0.35
UBA3-211ENST00000493957 ADGRE1Q14246 886 aa12.88□□□□□ -0.35
UBA3-211ENST00000493957 CLLU1OSQ5K130 101 aa12.88□□□□□ -0.35
UBA3-211ENST00000493957 TWF2Q6IBS0 349 aaKnown RBP12.88□□□□□ -0.35
UBA3-211ENST00000493957 ZNF598Q86UK7 904 aaKnown RBP12.88□□□□□ -0.35
UBA3-211ENST00000493957 LEO1Q8WVC0 666 aaPredicted RBP12.88□□□□□ -0.35
UBA3-211ENST00000493957 LARP4BQ92615 738 aaKnown RBP12.88□□□□□ -0.35
UBA3-211ENST00000493957 KIFAP3Q92845 792 aa12.88□□□□□ -0.35
UBA3-211ENST00000493957 REEP2Q9BRK0 252 aa12.88□□□□□ -0.35
UBA3-211ENST00000493957 EIF2AQ9BY44 585 aaKnown RBP12.88□□□□□ -0.35
UBA3-211ENST00000493957 NFKBIZQ9BYH8 718 aa12.88□□□□□ -0.35
UBA3-211ENST00000493957 GDPD2Q9HCC8 539 aa12.88□□□□□ -0.35
UBA3-211ENST00000493957 PLA2G2EQ9NZK7 142 aa12.88□□□□□ -0.35
UBA3-211ENST00000493957 RCOR1Q9UKL0 485 aa12.88□□□□□ -0.35
UBA3-211ENST00000493957 LRFN2Q9ULH4 789 aa12.88□□□□□ -0.35
UBA3-211ENST00000493957 CIZ1Q9ULV3 898 aaPredicted RBP12.88□□□□□ -0.35
UBA3-211ENST00000493957 PCDHB7Q9Y5E2 793 aa12.88□□□□□ -0.35
UBA3-211ENST00000493957 MRPL42Q9Y6G3 142 aaKnown RBP12.88□□□□□ -0.35
UBA3-211ENST00000493957 BRWD1Q9NSI6 2320 aa12.88□□□□□ -0.35
UBA3-211ENST00000493957 EYSQ5T1H1 3165 aa12.87□□□□□ -0.35
UBA3-211ENST00000493957 COL6A3P12111 3177 aa12.87□□□□□ -0.35
UBA3-211ENST00000493957 A0A0U1RQF3 1178 aa12.87□□□□□ -0.35
UBA3-211ENST00000493957 SLC16A4O15374 487 aa12.87□□□□□ -0.35
UBA3-211ENST00000493957 STAG3L1P0CL83 205 aa12.87□□□□□ -0.35
UBA3-211ENST00000493957 ME1P48163 572 aa12.87□□□□□ -0.35
UBA3-211ENST00000493957 RRAGBQ5VZM2 374 aa12.87□□□□□ -0.35
UBA3-211ENST00000493957 ATL3Q6DD88 541 aa12.87□□□□□ -0.35
UBA3-211ENST00000493957 TAS1R3Q7RTX0 852 aa12.87□□□□□ -0.35
UBA3-211ENST00000493957 DEPTORQ8TB45 409 aa12.87□□□□□ -0.35
UBA3-211ENST00000493957 KCNG4Q8TDN1 519 aa12.87□□□□□ -0.35
UBA3-211ENST00000493957 GDPD5Q8WTR4 605 aa12.87□□□□□ -0.35
UBA3-211ENST00000493957 IFT74Q96LB3 600 aa12.87□□□□□ -0.35
UBA3-211ENST00000493957 FZD8Q9H461 694 aa12.87□□□□□ -0.35
UBA3-211ENST00000493957 CHST12Q9NRB3 414 aa12.87□□□□□ -0.35
UBA3-211ENST00000493957 FAM105AQ9NUU6 356 aa12.87□□□□□ -0.35
UBA3-211ENST00000493957 TMEM161AQ9NX61 479 aa12.87□□□□□ -0.35
UBA3-211ENST00000493957 MYMKA6NI61 221 aa12.86□□□□□ -0.35
UBA3-211ENST00000493957 CCDC169A6NNP5 214 aa12.86□□□□□ -0.35
UBA3-211ENST00000493957 TBKBP1A7MCY6 615 aa12.86□□□□□ -0.35
UBA3-211ENST00000493957 PRKCBP05771 671 aa12.86□□□□□ -0.35
UBA3-211ENST00000493957 TXLNAP40222 546 aa12.86□□□□□ -0.35
UBA3-211ENST00000493957 STAT6P42226 847 aa12.86□□□□□ -0.35
UBA3-211ENST00000493957 AFF1P51825 1210 aaKnown RBP12.86□□□□□ -0.35
UBA3-211ENST00000493957 ERVK-21P61565 698 aa12.86□□□□□ -0.35
UBA3-211ENST00000493957 GIT2Q14161 759 aa12.86□□□□□ -0.35
UBA3-211ENST00000493957 BTG3Q14201 252 aaPredicted RBP12.86□□□□□ -0.35
UBA3-211ENST00000493957 PPP2R5AQ15172 486 aa12.86□□□□□ -0.35
UBA3-211ENST00000493957 E2F4Q16254 413 aa12.86□□□□□ -0.35
UBA3-211ENST00000493957 TPRNQ4KMQ1 711 aa12.86□□□□□ -0.35
UBA3-211ENST00000493957 EEF1DP3Q658K8 133 aa12.86□□□□□ -0.35
UBA3-211ENST00000493957 LRRC55Q6ZSA7 311 aa12.86□□□□□ -0.35
UBA3-211ENST00000493957 DYMQ7RTS9 669 aa12.86□□□□□ -0.35
UBA3-211ENST00000493957 ZBTB8OSQ8IWT0 167 aa12.86□□□□□ -0.35
UBA3-211ENST00000493957 CMTR2Q8IYT2 770 aaKnown RBP12.86□□□□□ -0.35
UBA3-211ENST00000493957 FIBCD1Q8N539 461 aa12.86□□□□□ -0.35
UBA3-211ENST00000493957 KCTD17Q8N5Z5 321 aa12.86□□□□□ -0.35
UBA3-211ENST00000493957 SMG8Q8ND04 991 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms