RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 COLGALT1Q8NBJ5 622 aa9.08□□□□□ -0.96
HDAC6-234ENST00000493923 GOLGA5Q8TBA6 731 aa9.08□□□□□ -0.96
HDAC6-234ENST00000493923 FEZF2Q8TBJ5 459 aa9.08□□□□□ -0.96
HDAC6-234ENST00000493923 SPOCK2Q92563 424 aa9.08□□□□□ -0.96
HDAC6-234ENST00000493923 MSLNLQ96KJ4 702 aa9.08□□□□□ -0.96
HDAC6-234ENST00000493923 CASD1Q96PB1 797 aa9.08□□□□□ -0.96
HDAC6-234ENST00000493923 PLVAPQ9BX97 442 aa9.08□□□□□ -0.96
HDAC6-234ENST00000493923 LMAN2LQ9H0V9 348 aa9.08□□□□□ -0.96
HDAC6-234ENST00000493923 LRFN2Q9ULH4 789 aa9.08□□□□□ -0.96
HDAC6-234ENST00000493923 ATP6V1DQ9Y5K8 247 aa9.08□□□□□ -0.96
HDAC6-234ENST00000493923 WDFY4Q6ZS81 3184 aa9.08□□□□□ -0.96
HDAC6-234ENST00000493923 A0A087WWV3 80 aa9.07□□□□□ -0.96
HDAC6-234ENST00000493923 IGKV6-21A0A0C4DH24 114 aa9.07□□□□□ -0.96
HDAC6-234ENST00000493923 PI4K2BG5E9Z4 385 aa9.07□□□□□ -0.96
HDAC6-234ENST00000493923 CPLX1O14810 134 aa9.07□□□□□ -0.96
HDAC6-234ENST00000493923 MAGEB2O15479 319 aa9.07□□□□□ -0.96
HDAC6-234ENST00000493923 MBTPS2O43462 519 aa9.07□□□□□ -0.96
HDAC6-234ENST00000493923 B4GALT3O60512 393 aa9.07□□□□□ -0.96
HDAC6-234ENST00000493923 JAK2O60674 1132 aa9.07□□□□□ -0.96
HDAC6-234ENST00000493923 BRD1O95696 1058 aa9.07□□□□□ -0.96
HDAC6-234ENST00000493923 CAVIN2O95810 425 aa9.07□□□□□ -0.96
HDAC6-234ENST00000493923 RPLP2P05387 115 aaKnown RBP9.07□□□□□ -0.96
HDAC6-234ENST00000493923 DARSP14868 501 aaKnown RBP9.07□□□□□ -0.96
HDAC6-234ENST00000493923 EIF4BP23588 611 aaKnown RBP9.07□□□□□ -0.96
HDAC6-234ENST00000493923 NRIP1P48552 1158 aa9.07□□□□□ -0.96
HDAC6-234ENST00000493923 JAK3P52333 1124 aa9.07□□□□□ -0.96
HDAC6-234ENST00000493923 NONOQ15233 471 aaKnown RBP eCLIP9.07□□□□□ -0.96
HDAC6-234ENST00000493923 ME3Q16798 604 aa9.07□□□□□ -0.96
HDAC6-234ENST00000493923 LETM2Q2VYF4 491 aa9.07□□□□□ -0.96
HDAC6-234ENST00000493923 LONRF3Q496Y0 759 aa9.07□□□□□ -0.96
HDAC6-234ENST00000493923 TTC31Q49AM3 519 aaPredicted RBP9.07□□□□□ -0.96
HDAC6-234ENST00000493923 SLC24A5Q71RS6 500 aa9.07□□□□□ -0.96
HDAC6-234ENST00000493923 ZNF598Q86UK7 904 aaKnown RBP9.07□□□□□ -0.96
HDAC6-234ENST00000493923 ECHDC2Q86YB7 292 aa9.07□□□□□ -0.96
HDAC6-234ENST00000493923 TNFRSF25Q93038 417 aa9.07□□□□□ -0.96
HDAC6-234ENST00000493923 LPPQ93052 612 aa9.07□□□□□ -0.96
HDAC6-234ENST00000493923 P2RX5Q93086 422 aa9.07□□□□□ -0.96
HDAC6-234ENST00000493923 FAM167AQ96KS9 214 aa9.07□□□□□ -0.96
HDAC6-234ENST00000493923 NIFKQ9BYG3 293 aaKnown RBP9.07□□□□□ -0.96
HDAC6-234ENST00000493923 FAM107BQ9H098 131 aa9.07□□□□□ -0.96
HDAC6-234ENST00000493923 KCNMB3Q9NPA1 279 aa9.07□□□□□ -0.96
HDAC6-234ENST00000493923 NRBP2Q9NSY0 501 aa9.07□□□□□ -0.96
HDAC6-234ENST00000493923 DONSONQ9NYP3 566 aa9.07□□□□□ -0.96
HDAC6-234ENST00000493923 RGL1Q9NZL6 768 aa9.07□□□□□ -0.96
HDAC6-234ENST00000493923 SEPT9Q9UHD8 586 aaPredicted RBP9.07□□□□□ -0.96
HDAC6-234ENST00000493923 DDX25Q9UHL0 483 aaKnown RBP9.07□□□□□ -0.96
HDAC6-234ENST00000493923 TCEAL9Q9UHQ7 104 aa9.07□□□□□ -0.96
HDAC6-234ENST00000493923 CDH22Q9UJ99 828 aa9.07□□□□□ -0.96
HDAC6-234ENST00000493923 BARX2Q9UMQ3 279 aaPredicted RBP9.07□□□□□ -0.96
HDAC6-234ENST00000493923 RWDD3Q9Y3V2 267 aa9.07□□□□□ -0.96
HDAC6-234ENST00000493923 PCDHB7Q9Y5E2 793 aa9.07□□□□□ -0.96
HDAC6-234ENST00000493923 ARID2Q68CP9 1835 aa9.07□□□□□ -0.96
HDAC6-234ENST00000493923 A0A087WZ62 844 aa9.06□□□□□ -0.96
HDAC6-234ENST00000493923 HIDE1A8MVS5 230 aa9.06□□□□□ -0.96
HDAC6-234ENST00000493923 FSCN2O14926 492 aa9.06□□□□□ -0.96
HDAC6-234ENST00000493923 GPR182O15218 404 aa9.06□□□□□ -0.96
HDAC6-234ENST00000493923 FGF18O76093 207 aa9.06□□□□□ -0.96
HDAC6-234ENST00000493923 SLU7O95391 586 aaKnown RBP9.06□□□□□ -0.96
HDAC6-234ENST00000493923 CD2BP2O95400 341 aaKnown RBP9.06□□□□□ -0.96
HDAC6-234ENST00000493923 SSTR3P32745 418 aaPredicted RBP9.06□□□□□ -0.96
HDAC6-234ENST00000493923 USP8P40818 1118 aa9.06□□□□□ -0.96
HDAC6-234ENST00000493923 SPIRE1Q08AE8 756 aa9.06□□□□□ -0.96
HDAC6-234ENST00000493923 TBC1D8BQ0IIM8 1120 aa9.06□□□□□ -0.96
HDAC6-234ENST00000493923 XKR3Q5GH77 459 aa9.06□□□□□ -0.96
HDAC6-234ENST00000493923 SWT1Q5T5J6 900 aaKnown RBP9.06□□□□□ -0.96
HDAC6-234ENST00000493923 CEP135Q66GS9 1140 aa9.06□□□□□ -0.96
HDAC6-234ENST00000493923 PIK3AP1Q6ZUJ8 805 aa9.06□□□□□ -0.96
HDAC6-234ENST00000493923 KRT25Q7Z3Z0 450 aa9.06□□□□□ -0.96
HDAC6-234ENST00000493923 FILIP1Q7Z7B0 1213 aa9.06□□□□□ -0.96
HDAC6-234ENST00000493923 SUGP1Q8IWZ8 645 aaKnown RBP9.06□□□□□ -0.96
HDAC6-234ENST00000493923 RNF169Q8NCN4 708 aa9.06□□□□□ -0.96
HDAC6-234ENST00000493923 HELQQ8TDG4 1101 aa9.06□□□□□ -0.96
HDAC6-234ENST00000493923 BCL7CQ8WUZ0 217 aaPredicted RBP9.06□□□□□ -0.96
HDAC6-234ENST00000493923 FDXACB1Q9BRP7 624 aaPredicted RBP9.06□□□□□ -0.96
HDAC6-234ENST00000493923 MINDY3Q9H8M7 445 aa9.06□□□□□ -0.96
HDAC6-234ENST00000493923 ATP6V0A4Q9HBG4 840 aa9.06□□□□□ -0.96
HDAC6-234ENST00000493923 C1orf112Q9NSG2 853 aa9.06□□□□□ -0.96
HDAC6-234ENST00000493923 TMEM161AQ9NX61 479 aa9.06□□□□□ -0.96
HDAC6-234ENST00000493923 ORC3Q9UBD5 711 aaPredicted RBP9.06□□□□□ -0.96
HDAC6-234ENST00000493923 MYO10Q9HD67 2058 aa9.06□□□□□ -0.96
HDAC6-234ENST00000493923 STK36Q9NRP7 1315 aa9.05□□□□□ -0.96
HDAC6-234ENST00000493923 NT5C1B-RDH14C9J2C7 533 aa9.05□□□□□ -0.96
HDAC6-234ENST00000493923 MYO1CO00159 1063 aa9.05□□□□□ -0.96
HDAC6-234ENST00000493923 MAFO75444 373 aaPredicted RBP9.05□□□□□ -0.96
HDAC6-234ENST00000493923 CDC25BP30305 580 aa9.05□□□□□ -0.96
HDAC6-234ENST00000493923 SFNP31947 248 aa9.05□□□□□ -0.96
HDAC6-234ENST00000493923 MAGEA9P43362 315 aa9.05□□□□□ -0.96
HDAC6-234ENST00000493923 AFF1P51825 1210 aaKnown RBP9.05□□□□□ -0.96
HDAC6-234ENST00000493923 UBE2HP62256 183 aa9.05□□□□□ -0.96
HDAC6-234ENST00000493923 PPP2R5CQ13362 524 aa9.05□□□□□ -0.96
HDAC6-234ENST00000493923 SMAD2Q15796 467 aaKnown RBP9.05□□□□□ -0.96
HDAC6-234ENST00000493923 NAALADL2Q58DX5 795 aa9.05□□□□□ -0.96
HDAC6-234ENST00000493923 SPOUT1Q5T280 376 aaKnown RBP9.05□□□□□ -0.96
HDAC6-234ENST00000493923 PLPP4Q5VZY2 271 aa9.05□□□□□ -0.96
HDAC6-234ENST00000493923 MOXD1Q6UVY6 613 aa9.05□□□□□ -0.96
HDAC6-234ENST00000493923 TMEM173Q86WV6 379 aaPredicted RBP9.05□□□□□ -0.96
HDAC6-234ENST00000493923 EFHBQ8N7U6 833 aa9.05□□□□□ -0.96
HDAC6-234ENST00000493923 NSUN7Q8NE18 718 aaKnown RBP9.05□□□□□ -0.96
HDAC6-234ENST00000493923 RDM1Q8NG50 284 aa9.05□□□□□ -0.96
HDAC6-234ENST00000493923 NLRP7Q8WX94 980 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms