RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 TMEM134Q9H6X4 195 aa21.26■□□□□ 0.99
USP39-218ENST00000493829 TMEM206Q9H813 350 aa21.26■□□□□ 0.99
USP39-218ENST00000493829 EXOC7Q9UPT5 735 aa21.26■□□□□ 0.99
USP39-218ENST00000493829 TGFB1I1O43294 461 aa21.25■□□□□ 0.99
USP39-218ENST00000493829 ERLIN2O94905 339 aa21.25■□□□□ 0.99
USP39-218ENST00000493829 ERCC5P28715 1186 aaPredicted RBP21.25■□□□□ 0.99
USP39-218ENST00000493829 LIG4P49917 911 aa21.25■□□□□ 0.99
USP39-218ENST00000493829 CDC42EP1Q00587 391 aa21.25■□□□□ 0.99
USP39-218ENST00000493829 FAAP100Q0VG06 881 aa21.25■□□□□ 0.99
USP39-218ENST00000493829 PRPF4BQ13523 1007 aaKnown RBP21.25■□□□□ 0.99
USP39-218ENST00000493829 HSP90AA4PQ58FG1 418 aa21.25■□□□□ 0.99
USP39-218ENST00000493829 SRGAP1Q7Z6B7 1085 aa21.25■□□□□ 0.99
USP39-218ENST00000493829 CDR2LQ86X02 465 aaPredicted RBP21.25■□□□□ 0.99
USP39-218ENST00000493829 DHX40Q8IX18 779 aaKnown RBP21.25■□□□□ 0.99
USP39-218ENST00000493829 OSBPL7Q9BZF2 842 aa21.25■□□□□ 0.99
USP39-218ENST00000493829 GBP3Q9H0R5 595 aa21.25■□□□□ 0.99
USP39-218ENST00000493829 RBSNQ9H1K0 784 aa21.25■□□□□ 0.99
USP39-218ENST00000493829 ANKFY1Q9P2R3 1169 aa21.25■□□□□ 0.99
USP39-218ENST00000493829 UMODL1Q5DID0 1318 aa21.25■□□□□ 0.99
USP39-218ENST00000493829 BICDL2A1A5D9 508 aa21.24■□□□□ 0.99
USP39-218ENST00000493829 ANKRD63C9JTQ0 380 aa21.24■□□□□ 0.99
USP39-218ENST00000493829 MYL5Q02045 173 aa21.24■□□□□ 0.99
USP39-218ENST00000493829 POU5F1BQ06416 359 aa21.24■□□□□ 0.99
USP39-218ENST00000493829 TPD52L1Q16890 204 aaPredicted RBP21.24■□□□□ 0.99
USP39-218ENST00000493829 CENPPQ6IPU0 288 aa21.24■□□□□ 0.99
USP39-218ENST00000493829 TTI2Q6NXR4 508 aa21.24■□□□□ 0.99
USP39-218ENST00000493829 CATSPER4Q7RTX7 472 aa21.24■□□□□ 0.99
USP39-218ENST00000493829 RPAINQ86UA6 219 aa21.24■□□□□ 0.99
USP39-218ENST00000493829 IFNLR1Q8IU57 520 aaPredicted RBP21.24■□□□□ 0.99
USP39-218ENST00000493829 CCDC155Q8N6L0 562 aa21.24■□□□□ 0.99
USP39-218ENST00000493829 NOC3LQ8WTT2 800 aaKnown RBP21.24■□□□□ 0.99
USP39-218ENST00000493829 CPB2Q96IY4 423 aa21.24■□□□□ 0.99
USP39-218ENST00000493829 MRPL4Q9BYD3 311 aaKnown RBP21.24■□□□□ 0.99
USP39-218ENST00000493829 PPP1R12CQ9BZL4 782 aa21.24■□□□□ 0.99
USP39-218ENST00000493829 FZD8Q9H461 694 aa21.24■□□□□ 0.99
USP39-218ENST00000493829 AGPAT3Q9NRZ7 376 aa21.24■□□□□ 0.99
USP39-218ENST00000493829 TYW1Q9NV66 732 aaKnown RBP21.24■□□□□ 0.99
USP39-218ENST00000493829 PRMT7Q9NVM4 692 aaPredicted RBP21.24■□□□□ 0.99
USP39-218ENST00000493829 PCDH10Q9P2E7 1040 aa21.24■□□□□ 0.99
USP39-218ENST00000493829 BECN2A8MW95 431 aa21.24■□□□□ 0.99
USP39-218ENST00000493829 TSPAN1O60635 241 aa21.24■□□□□ 0.99
USP39-218ENST00000493829 RPLP2P05387 115 aaKnown RBP21.24■□□□□ 0.99
USP39-218ENST00000493829 GHRP10912 638 aa21.24■□□□□ 0.99
USP39-218ENST00000493829 HARSP12081 509 aaKnown RBP21.24■□□□□ 0.99
USP39-218ENST00000493829 EIF4BP23588 611 aaKnown RBP21.24■□□□□ 0.99
USP39-218ENST00000493829 MATR3P43243 847 aaKnown RBP eCLIP21.24■□□□□ 0.99
USP39-218ENST00000493829 ZCWPW2Q504Y3 356 aa21.24■□□□□ 0.99
USP39-218ENST00000493829 C1orf53Q5VUE5 145 aa21.24■□□□□ 0.99
USP39-218ENST00000493829 SLC39A4Q6P5W5 647 aa21.24■□□□□ 0.99
USP39-218ENST00000493829 HS2ST1Q7LGA3 356 aa21.24■□□□□ 0.99
USP39-218ENST00000493829 BPIFA3Q9BQP9 254 aa21.24■□□□□ 0.99
USP39-218ENST00000493829 NOC2LQ9Y3T9 749 aaKnown RBP21.24■□□□□ 0.99
USP39-218ENST00000493829 CCDC85CA6NKD9 419 aa21.23■□□□□ 0.99
USP39-218ENST00000493829 CALUO43852 315 aaPredicted RBP21.23■□□□□ 0.99
USP39-218ENST00000493829 CAPN2P17655 700 aa21.23■□□□□ 0.99
USP39-218ENST00000493829 SFPQP23246 707 aaKnown RBP eCLIP21.23■□□□□ 0.99
USP39-218ENST00000493829 ABCD1P33897 745 aa21.23■□□□□ 0.99
USP39-218ENST00000493829 CYP2J2P51589 502 aa21.23■□□□□ 0.99
USP39-218ENST00000493829 IQCB1Q15051 598 aa21.23■□□□□ 0.99
USP39-218ENST00000493829 AMHR2Q16671 573 aa21.23■□□□□ 0.99
USP39-218ENST00000493829 LRRC8DQ7L1W4 858 aa21.23■□□□□ 0.99
USP39-218ENST00000493829 UBE2Q1Q7Z7E8 422 aa21.23■□□□□ 0.99
USP39-218ENST00000493829 CAGE1Q8TC20 777 aa21.23■□□□□ 0.99
USP39-218ENST00000493829 DUSP9Q99956 384 aaKnown RBP21.23■□□□□ 0.99
USP39-218ENST00000493829 CBWD1Q9BRT8 395 aa21.23■□□□□ 0.99
USP39-218ENST00000493829 HIPK3Q9H422 1215 aa21.23■□□□□ 0.99
USP39-218ENST00000493829 PCIF1Q9H4Z3 704 aa21.23■□□□□ 0.99
USP39-218ENST00000493829 PRDM5Q9NQX1 630 aaPredicted RBP21.23■□□□□ 0.99
USP39-218ENST00000493829 NFE2L3Q9Y4A8 694 aa21.23■□□□□ 0.99
USP39-218ENST00000493829 TANC1Q9C0D5 1861 aa21.23■□□□□ 0.99
USP39-218ENST00000493829 ACKR2O00590 384 aa21.22■□□□□ 0.99
USP39-218ENST00000493829 PDXKO00764 312 aa21.22■□□□□ 0.99
USP39-218ENST00000493829 SCP2P22307 547 aa21.22■□□□□ 0.99
USP39-218ENST00000493829 LRRC63Q05C16 580 aa21.22■□□□□ 0.99
USP39-218ENST00000493829 BFSP2Q13515 415 aa21.22■□□□□ 0.99
USP39-218ENST00000493829 ARMCX5Q6P1M9 558 aa21.22■□□□□ 0.99
USP39-218ENST00000493829 TRAF7Q6Q0C0 670 aa21.22■□□□□ 0.99
USP39-218ENST00000493829 ZBTB33Q86T24 672 aa21.22■□□□□ 0.99
USP39-218ENST00000493829 FAM228AQ86W67 206 aa21.22■□□□□ 0.99
USP39-218ENST00000493829 CSGALNACT2Q8N6G5 542 aa21.22■□□□□ 0.99
USP39-218ENST00000493829 ZBTB45Q96K62 511 aaPredicted RBP21.22■□□□□ 0.99
USP39-218ENST00000493829 NOC4LQ9BVI4 516 aaKnown RBP21.22■□□□□ 0.99
USP39-218ENST00000493829 CNTNAP2Q9UHC6 1331 aa21.22■□□□□ 0.99
USP39-218ENST00000493829 CAND2O75155 1236 aa21.21■□□□□ 0.99
USP39-218ENST00000493829 RPS6KA5O75582 802 aa21.21■□□□□ 0.99
USP39-218ENST00000493829 CAVIN2O95810 425 aa21.21■□□□□ 0.99
USP39-218ENST00000493829 NR3C1P04150 777 aa21.21■□□□□ 0.99
USP39-218ENST00000493829 CLTBP09497 229 aa21.21■□□□□ 0.99
USP39-218ENST00000493829 SELPP16109 830 aa21.21■□□□□ 0.99
USP39-218ENST00000493829 NCAPHQ15003 741 aa21.21■□□□□ 0.99
USP39-218ENST00000493829 CT47A1Q5JQC4 288 aaPredicted RBP21.21■□□□□ 0.99
USP39-218ENST00000493829 FBXO47Q5MNV8 452 aa21.21■□□□□ 0.99
USP39-218ENST00000493829 ATF7IP2Q5U623 682 aa21.21■□□□□ 0.99
USP39-218ENST00000493829 ENOX1Q8TC92 643 aaKnown RBP21.21■□□□□ 0.99
USP39-218ENST00000493829 TOX2Q96NM4 488 aa21.21■□□□□ 0.99
USP39-218ENST00000493829 TMEM39AQ9NV64 488 aa21.21■□□□□ 0.99
USP39-218ENST00000493829 MKI67P46013 3256 aaKnown RBP21.21■□□□□ 0.99
USP39-218ENST00000493829 TULP1O00294 542 aaPredicted RBP21.21■□□□□ 0.99
USP39-218ENST00000493829 ARF4P18085 180 aaPredicted RBP21.21■□□□□ 0.99
USP39-218ENST00000493829 NR2F2P24468 414 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms