RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 MYH11P35749 1972 aa19.69■□□□□ 0.74
PDLIM7-208ENST00000493815 KLRC4O43908 158 aa19.68■□□□□ 0.74
PDLIM7-208ENST00000493815 GAP43P17677 238 aa19.68■□□□□ 0.74
PDLIM7-208ENST00000493815 ARF4P18085 180 aaPredicted RBP19.68■□□□□ 0.74
PDLIM7-208ENST00000493815 EFNA5P52803 228 aa19.68■□□□□ 0.74
PDLIM7-208ENST00000493815 DPYDQ12882 1025 aa19.68■□□□□ 0.74
PDLIM7-208ENST00000493815 DSC3Q14574 896 aa19.68■□□□□ 0.74
PDLIM7-208ENST00000493815 POSTNQ15063 836 aa19.68■□□□□ 0.74
PDLIM7-208ENST00000493815 UNC13DQ70J99 1090 aa19.68■□□□□ 0.74
PDLIM7-208ENST00000493815 MYBP10242 640 aa19.68■□□□□ 0.74
PDLIM7-208ENST00000493815 ZSCAN20P17040 1043 aaPredicted RBP19.68■□□□□ 0.74
PDLIM7-208ENST00000493815 PRPF4BQ13523 1007 aaKnown RBP19.68■□□□□ 0.74
PDLIM7-208ENST00000493815 FAM109BQ6ICB4 259 aaPredicted RBP19.68■□□□□ 0.74
PDLIM7-208ENST00000493815 MYOCDQ8IZQ8 938 aa19.68■□□□□ 0.74
PDLIM7-208ENST00000493815 TIGD1Q96MW7 591 aa19.68■□□□□ 0.74
PDLIM7-208ENST00000493815 FTHL17Q9BXU8 183 aa19.68■□□□□ 0.74
PDLIM7-208ENST00000493815 TSPYL2Q9H2G4 693 aaPredicted RBP19.68■□□□□ 0.74
PDLIM7-208ENST00000493815 PRMT7Q9NVM4 692 aaPredicted RBP19.68■□□□□ 0.74
PDLIM7-208ENST00000493815 BAIAP3O94812 1187 aa19.67■□□□□ 0.74
PDLIM7-208ENST00000493815 CAMK4Q16566 473 aa19.67■□□□□ 0.74
PDLIM7-208ENST00000493815 TMEM132AQ24JP5 1023 aa19.67■□□□□ 0.74
PDLIM7-208ENST00000493815 KMT5BQ4FZB7 885 aa19.67■□□□□ 0.74
PDLIM7-208ENST00000493815 NT5DC1Q5TFE4 455 aa19.67■□□□□ 0.74
PDLIM7-208ENST00000493815 RASIP1Q5U651 963 aa19.67■□□□□ 0.74
PDLIM7-208ENST00000493815 TWF2Q6IBS0 349 aaKnown RBP19.67■□□□□ 0.74
PDLIM7-208ENST00000493815 KANK3Q6NY19 840 aa19.67■□□□□ 0.74
PDLIM7-208ENST00000493815 FAM117BQ6P1L5 589 aa19.67■□□□□ 0.74
PDLIM7-208ENST00000493815 ZNF720Q7Z2F6 126 aa19.67■□□□□ 0.74
PDLIM7-208ENST00000493815 TDHQ8IZJ6 230 aa19.67■□□□□ 0.74
PDLIM7-208ENST00000493815 GPT2Q8TD30 523 aa19.67■□□□□ 0.74
PDLIM7-208ENST00000493815 IKZF4Q9H2S9 585 aa19.67■□□□□ 0.74
PDLIM7-208ENST00000493815 TMEM134Q9H6X4 195 aa19.67■□□□□ 0.74
PDLIM7-208ENST00000493815 SEL1LQ9UBV2 794 aa19.67■□□□□ 0.74
PDLIM7-208ENST00000493815 SLC4A7Q9Y6M7 1214 aa19.67■□□□□ 0.74
PDLIM7-208ENST00000493815 PHLPP2Q6ZVD8 1323 aa19.67■□□□□ 0.74
PDLIM7-208ENST00000493815 ACKR2O00590 384 aa19.66■□□□□ 0.74
PDLIM7-208ENST00000493815 UPP2O95045 317 aa19.66■□□□□ 0.74
PDLIM7-208ENST00000493815 GCNT3O95395 438 aa19.66■□□□□ 0.74
PDLIM7-208ENST00000493815 RPN1P04843 607 aaKnown RBP19.66■□□□□ 0.74
PDLIM7-208ENST00000493815 MCM4P33991 863 aa19.66■□□□□ 0.74
PDLIM7-208ENST00000493815 KCNJ6P48051 423 aa19.66■□□□□ 0.74
PDLIM7-208ENST00000493815 KCNA1Q09470 495 aa19.66■□□□□ 0.74
PDLIM7-208ENST00000493815 FAM187BQ17R55 369 aa19.66■□□□□ 0.74
PDLIM7-208ENST00000493815 PPP4R3CPQ6ZMV5 832 aa19.66■□□□□ 0.74
PDLIM7-208ENST00000493815 TARS2Q9BW92 718 aaKnown RBP19.66■□□□□ 0.74
PDLIM7-208ENST00000493815 OLFML3Q9NRN5 406 aa19.66■□□□□ 0.74
PDLIM7-208ENST00000493815 RGS18Q9NS28 235 aa19.66■□□□□ 0.74
PDLIM7-208ENST00000493815 KCNG1Q9UIX4 513 aa19.66■□□□□ 0.74
PDLIM7-208ENST00000493815 TBX20Q9UMR3 447 aa19.66■□□□□ 0.74
PDLIM7-208ENST00000493815 PVALEFA0A1B0GWK0 134 aa19.65■□□□□ 0.74
PDLIM7-208ENST00000493815 GRXCR1A8MXD5 290 aa19.65■□□□□ 0.74
PDLIM7-208ENST00000493815 MYL1P05976 194 aa19.65■□□□□ 0.74
PDLIM7-208ENST00000493815 EHHADHQ08426 723 aa19.65■□□□□ 0.74
PDLIM7-208ENST00000493815 STRN3Q13033 797 aa19.65■□□□□ 0.74
PDLIM7-208ENST00000493815 FAM26FQ5R3K3 315 aa19.65■□□□□ 0.74
PDLIM7-208ENST00000493815 PRIMPOLQ96LW4 560 aa19.65■□□□□ 0.74
PDLIM7-208ENST00000493815 EIF2AQ9BY44 585 aaKnown RBP19.65■□□□□ 0.74
PDLIM7-208ENST00000493815 SLC39A2Q9NP94 309 aa19.65■□□□□ 0.74
PDLIM7-208ENST00000493815 EXOC1Q9NV70 894 aa19.65■□□□□ 0.74
PDLIM7-208ENST00000493815 CNTNAP2Q9UHC6 1331 aa19.65■□□□□ 0.74
PDLIM7-208ENST00000493815 GTF2BQ00403 316 aa19.65■□□□□ 0.74
PDLIM7-208ENST00000493815 NCBP1Q09161 790 aaKnown RBP19.65■□□□□ 0.74
PDLIM7-208ENST00000493815 PCBP1Q15365 356 aaKnown RBP eCLIP19.65■□□□□ 0.749e-7■■■■■ 32.7
PDLIM7-208ENST00000493815 UBXN11Q5T124 520 aa19.65■□□□□ 0.74
PDLIM7-208ENST00000493815 EEF1DP3Q658K8 133 aa19.65■□□□□ 0.74
PDLIM7-208ENST00000493815 NOTUMQ6P988 496 aa19.65■□□□□ 0.74
PDLIM7-208ENST00000493815 CCDC34Q96HJ3 373 aa19.65■□□□□ 0.74
PDLIM7-208ENST00000493815 MTIF3Q9H2K0 278 aaKnown RBP19.65■□□□□ 0.74
PDLIM7-208ENST00000493815 CHST12Q9NRB3 414 aa19.65■□□□□ 0.74
PDLIM7-208ENST00000493815 A0A1B0GUA9 196 aa19.64■□□□□ 0.73
PDLIM7-208ENST00000493815 C9IYK1 514 aa19.64■□□□□ 0.73
PDLIM7-208ENST00000493815 H0YCG3 227 aa19.64■□□□□ 0.73
PDLIM7-208ENST00000493815 EFCAB14O75071 495 aa19.64■□□□□ 0.73
PDLIM7-208ENST00000493815 PRPF6O94906 941 aaKnown RBP19.64■□□□□ 0.73
PDLIM7-208ENST00000493815 AMHP03971 560 aa19.64■□□□□ 0.73
PDLIM7-208ENST00000493815 ATP2A2P16615 1042 aaKnown RBP19.64■□□□□ 0.73
PDLIM7-208ENST00000493815 ATF7IP2Q5U623 682 aa19.64■□□□□ 0.73
PDLIM7-208ENST00000493815 SLC24A5Q71RS6 500 aa19.64■□□□□ 0.73
PDLIM7-208ENST00000493815 RNF169Q8NCN4 708 aa19.64■□□□□ 0.73
PDLIM7-208ENST00000493815 BICD1Q96G01 975 aa19.64■□□□□ 0.73
PDLIM7-208ENST00000493815 ACO2Q99798 780 aaKnown RBP19.64■□□□□ 0.73
PDLIM7-208ENST00000493815 STRA6Q9BX79 667 aa19.64■□□□□ 0.73
PDLIM7-208ENST00000493815 MRPL4Q9BYD3 311 aaKnown RBP19.64■□□□□ 0.73
PDLIM7-208ENST00000493815 PDZD7Q9H5P4 517 aa19.64■□□□□ 0.73
PDLIM7-208ENST00000493815 PCDHA5Q9Y5H7 936 aa19.64■□□□□ 0.73
PDLIM7-208ENST00000493815 MICAL3Q7RTP6 2002 aa19.64■□□□□ 0.73
PDLIM7-208ENST00000493815 PPP1R37O75864 691 aa19.63■□□□□ 0.73
PDLIM7-208ENST00000493815 AXLP30530 894 aa19.63■□□□□ 0.73
PDLIM7-208ENST00000493815 STK4Q13043 487 aa19.63■□□□□ 0.73
PDLIM7-208ENST00000493815 ZBTB45Q96K62 511 aaPredicted RBP19.63■□□□□ 0.73
PDLIM7-208ENST00000493815 ST6GALNAC4Q9H4F1 302 aa19.63■□□□□ 0.73
PDLIM7-208ENST00000493815 HES2Q9Y543 173 aa19.63■□□□□ 0.73
PDLIM7-208ENST00000493815 TISP43B9A030 160 aa19.62■□□□□ 0.73
PDLIM7-208ENST00000493815 NPTXRO95502 500 aa19.62■□□□□ 0.73
PDLIM7-208ENST00000493815 RABGGTBP53611 331 aa19.62■□□□□ 0.73
PDLIM7-208ENST00000493815 ZBTB33Q86T24 672 aa19.62■□□□□ 0.73
PDLIM7-208ENST00000493815 SLC17A8Q8NDX2 589 aa19.62■□□□□ 0.73
PDLIM7-208ENST00000493815 C1orf112Q9NSG2 853 aa19.62■□□□□ 0.73
PDLIM7-208ENST00000493815 FAM105AQ9NUU6 356 aa19.62■□□□□ 0.73
PDLIM7-208ENST00000493815 ANKFY1Q9P2R3 1169 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms