RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 XYLT1Q86Y38 959 aa6.27□□□□□ -1.41
SMC4-223ENST00000493695 CMTR2Q8IYT2 770 aaKnown RBP6.27□□□□□ -1.41
SMC4-223ENST00000493695 LILRB2Q8N423 598 aa6.27□□□□□ -1.41
SMC4-223ENST00000493695 CAVIN3Q969G5 261 aa6.27□□□□□ -1.41
SMC4-223ENST00000493695 FERMT2Q96AC1 680 aa6.27□□□□□ -1.41
SMC4-223ENST00000493695 PITHD1Q9GZP4 211 aaPredicted RBP6.27□□□□□ -1.41
SMC4-223ENST00000493695 HAPLN2Q9GZV7 340 aa6.27□□□□□ -1.41
SMC4-223ENST00000493695 ADARB2Q9NS39 739 aaKnown RBP6.27□□□□□ -1.41
SMC4-223ENST00000493695 IFT57Q9NWB7 429 aa6.27□□□□□ -1.41
SMC4-223ENST00000493695 GRID2IPA4D2P6 1211 aa6.26□□□□□ -1.41
SMC4-223ENST00000493695 DNAJC8O75937 253 aaPredicted RBP6.26□□□□□ -1.41
SMC4-223ENST00000493695 CFBP00751 764 aa6.26□□□□□ -1.41
SMC4-223ENST00000493695 HSP90B1P14625 803 aaKnown RBP6.26□□□□□ -1.41
SMC4-223ENST00000493695 XPAP23025 273 aaPredicted RBP6.26□□□□□ -1.41
SMC4-223ENST00000493695 PTTG1IPP53801 180 aa6.26□□□□□ -1.41
SMC4-223ENST00000493695 DUSP2Q05923 314 aa6.26□□□□□ -1.41
SMC4-223ENST00000493695 CD69Q07108 199 aa6.26□□□□□ -1.41
SMC4-223ENST00000493695 CDCA2Q69YH5 1023 aaPredicted RBP6.26□□□□□ -1.41
SMC4-223ENST00000493695 ZZZ3Q8IYH5 903 aa6.26□□□□□ -1.41
SMC4-223ENST00000493695 IL17RAQ96F46 866 aa6.26□□□□□ -1.41
SMC4-223ENST00000493695 NDC1Q9BTX1 674 aa6.26□□□□□ -1.41
SMC4-223ENST00000493695 WDR11Q9BZH6 1224 aa6.26□□□□□ -1.41
SMC4-223ENST00000493695 TOR3AQ9H497 397 aa6.26□□□□□ -1.41
SMC4-223ENST00000493695 RSAD1Q9HA92 442 aa6.26□□□□□ -1.41
SMC4-223ENST00000493695 INTS7Q9NVH2 962 aaKnown RBP6.26□□□□□ -1.41
SMC4-223ENST00000493695 OXSMQ9NWU1 459 aa6.26□□□□□ -1.41
SMC4-223ENST00000493695 H2AFY2Q9P0M6 372 aaPredicted RBP6.26□□□□□ -1.41
SMC4-223ENST00000493695 SPO11Q9Y5K1 396 aa6.26□□□□□ -1.41
SMC4-223ENST00000493695 A0A0A6YYK5 440 aaPredicted RBP6.25□□□□□ -1.41
SMC4-223ENST00000493695 CENPVL1A0A0U1RR11 272 aa6.25□□□□□ -1.41
SMC4-223ENST00000493695 PRR5-ARHGAP8B1AHC4 643 aa6.25□□□□□ -1.41
SMC4-223ENST00000493695 CBX4O00257 560 aa6.25□□□□□ -1.41
SMC4-223ENST00000493695 GAS7O60861 476 aa6.25□□□□□ -1.41
SMC4-223ENST00000493695 NCR1O76036 304 aa6.25□□□□□ -1.41
SMC4-223ENST00000493695 NDUFA10O95299 355 aa6.25□□□□□ -1.41
SMC4-223ENST00000493695 RBL2Q08999 1139 aa6.25□□□□□ -1.41
SMC4-223ENST00000493695 VPS72Q15906 364 aa6.25□□□□□ -1.41
SMC4-223ENST00000493695 FNDC3BQ53EP0 1204 aaKnown RBP6.25□□□□□ -1.41
SMC4-223ENST00000493695 KANSL1Q7Z3B3 1105 aa6.25□□□□□ -1.41
SMC4-223ENST00000493695 PASD1Q8IV76 773 aa6.25□□□□□ -1.41
SMC4-223ENST00000493695 JMYQ8N9B5 988 aa6.25□□□□□ -1.41
SMC4-223ENST00000493695 PIK3C3Q8NEB9 887 aa6.25□□□□□ -1.41
SMC4-223ENST00000493695 MKL1Q969V6 931 aa6.25□□□□□ -1.41
SMC4-223ENST00000493695 ARMC5Q96C12 935 aa6.25□□□□□ -1.41
SMC4-223ENST00000493695 ZNF764Q96H86 408 aaPredicted RBP6.25□□□□□ -1.41
SMC4-223ENST00000493695 SOX7Q9BT81 388 aa6.25□□□□□ -1.41
SMC4-223ENST00000493695 SLC46A2Q9BY10 475 aa6.25□□□□□ -1.41
SMC4-223ENST00000493695 CPEB1Q9BZB8 566 aaKnown RBP6.25□□□□□ -1.41
SMC4-223ENST00000493695 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.25□□□□□ -1.41
SMC4-223ENST00000493695 PCDHB6Q9Y5E3 794 aa6.25□□□□□ -1.41
SMC4-223ENST00000493695 HS3ST4Q9Y661 456 aa6.25□□□□□ -1.41
SMC4-223ENST00000493695 POLR2AP24928 1970 aaKnown RBP6.25□□□□□ -1.41
SMC4-223ENST00000493695 MYPNQ86TC9 1320 aa6.25□□□□□ -1.41
SMC4-223ENST00000493695 COL4A3Q01955 1670 aa6.24□□□□□ -1.41
SMC4-223ENST00000493695 AHRRA9YTQ3 701 aa6.24□□□□□ -1.41
SMC4-223ENST00000493695 CD40P25942 277 aa6.24□□□□□ -1.41
SMC4-223ENST00000493695 FAM189BP81408 668 aa6.24□□□□□ -1.41
SMC4-223ENST00000493695 IQSEC1Q6DN90 963 aa6.24□□□□□ -1.41
SMC4-223ENST00000493695 GDF7Q7Z4P5 450 aa6.24□□□□□ -1.41
SMC4-223ENST00000493695 SERHL2Q9H4I8 314 aa6.24□□□□□ -1.41
SMC4-223ENST00000493695 AKIP1Q9NQ31 210 aa6.24□□□□□ -1.41
SMC4-223ENST00000493695 RNASET2O00584 256 aaKnown RBP6.23□□□□□ -1.41
SMC4-223ENST00000493695 CD38P28907 300 aa6.23□□□□□ -1.41
SMC4-223ENST00000493695 ZEB1P37275 1124 aaPredicted RBP6.23□□□□□ -1.41
SMC4-223ENST00000493695 AVPR1BP47901 424 aa6.23□□□□□ -1.41
SMC4-223ENST00000493695 GZMKP49863 264 aa6.23□□□□□ -1.41
SMC4-223ENST00000493695 RNASE9P60153 205 aaKnown RBP6.23□□□□□ -1.41
SMC4-223ENST00000493695 ZKSCAN2Q63HK3 967 aa6.23□□□□□ -1.41
SMC4-223ENST00000493695 SYCE2Q6PIF2 218 aa6.23□□□□□ -1.41
SMC4-223ENST00000493695 LMBR1LQ6UX01 489 aa6.23□□□□□ -1.41
SMC4-223ENST00000493695 Q6YL49 198 aa6.23□□□□□ -1.41
SMC4-223ENST00000493695 ESPNLQ6ZVH7 1005 aa6.23□□□□□ -1.41
SMC4-223ENST00000493695 UNC5BQ8IZJ1 945 aa6.23□□□□□ -1.41
SMC4-223ENST00000493695 CDYL2Q8N8U2 506 aa6.23□□□□□ -1.41
SMC4-223ENST00000493695 OR52N2Q8NGI0 321 aa6.23□□□□□ -1.41
SMC4-223ENST00000493695 MYEOVQ96EZ4 313 aa6.23□□□□□ -1.41
SMC4-223ENST00000493695 DCLRE1CQ96SD1 692 aaKnown RBP6.23□□□□□ -1.41
SMC4-223ENST00000493695 POGKQ9P215 609 aa6.23□□□□□ -1.41
SMC4-223ENST00000493695 MSRAQ9UJ68 235 aa6.23□□□□□ -1.41
SMC4-223ENST00000493695 SPATA31A6Q5VVP1 1343 aa6.23□□□□□ -1.41
SMC4-223ENST00000493695 LY86O95711 162 aa6.22□□□□□ -1.41
SMC4-223ENST00000493695 SDSP20132 328 aa6.22□□□□□ -1.41
SMC4-223ENST00000493695 NEK4P51957 841 aa6.22□□□□□ -1.41
SMC4-223ENST00000493695 TAP1Q03518 808 aa6.22□□□□□ -1.41
SMC4-223ENST00000493695 MGAT5Q09328 741 aa6.22□□□□□ -1.41
SMC4-223ENST00000493695 ERCC6LQ2NKX8 1250 aa6.22□□□□□ -1.41
SMC4-223ENST00000493695 RD3Q7Z3Z2 195 aa6.22□□□□□ -1.41
SMC4-223ENST00000493695 PDCD2LQ9BRP1 358 aa6.22□□□□□ -1.41
SMC4-223ENST00000493695 LSM14BQ9BX40 385 aaKnown RBP6.22□□□□□ -1.41
SMC4-223ENST00000493695 UNC119BA6NIH7 251 aa6.21□□□□□ -1.42
SMC4-223ENST00000493695 LEFTY2O00292 366 aa6.21□□□□□ -1.42
SMC4-223ENST00000493695 PPP1R12AO14974 1030 aaPredicted RBP6.21□□□□□ -1.42
SMC4-223ENST00000493695 KPNA6O60684 536 aa6.21□□□□□ -1.42
SMC4-223ENST00000493695 ATP2A2P16615 1042 aaKnown RBP6.21□□□□□ -1.42
SMC4-223ENST00000493695 ZNF37AP17032 561 aaPredicted RBP6.21□□□□□ -1.42
SMC4-223ENST00000493695 FBLP22087 321 aaKnown RBP6.21□□□□□ -1.42
SMC4-223ENST00000493695 ZFP36P26651 326 aaKnown RBP6.21□□□□□ -1.42
SMC4-223ENST00000493695 NRG3P56975 720 aa6.21□□□□□ -1.42
SMC4-223ENST00000493695 C21orf58P58505 322 aa6.21□□□□□ -1.42
SMC4-223ENST00000493695 NHLH2Q02577 135 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms