RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 NR2E1Q9Y466 385 aa18.54■□□□□ 0.56
PTPRU-208ENST00000493601 TMEM221A6NGB7 291 aa18.53■□□□□ 0.56
PTPRU-208ENST00000493601 M0R296 226 aa18.53■□□□□ 0.56
PTPRU-208ENST00000493601 NEMFO60524 1076 aa18.53■□□□□ 0.56
PTPRU-208ENST00000493601 LARGE1O95461 756 aa18.53■□□□□ 0.56
PTPRU-208ENST00000493601 CXCL14O95715 111 aa18.53■□□□□ 0.56
PTPRU-208ENST00000493601 GALTP07902 379 aa18.53■□□□□ 0.56
PTPRU-208ENST00000493601 CTSAP10619 480 aa18.53■□□□□ 0.56
PTPRU-208ENST00000493601 MXD4Q14582 209 aaPredicted RBP18.53■□□□□ 0.56
PTPRU-208ENST00000493601 BMP8AQ7Z5Y6 402 aa18.53■□□□□ 0.56
PTPRU-208ENST00000493601 MRPL10Q7Z7H8 261 aaKnown RBP18.53■□□□□ 0.56
PTPRU-208ENST00000493601 NSUN7Q8NE18 718 aaKnown RBP18.53■□□□□ 0.56
PTPRU-208ENST00000493601 CCDC43Q96MW1 224 aaKnown RBP18.53■□□□□ 0.56
PTPRU-208ENST00000493601 RSAD1Q9HA92 442 aa18.53■□□□□ 0.56
PTPRU-208ENST00000493601 DZANK1Q9NVP4 752 aa18.53■□□□□ 0.56
PTPRU-208ENST00000493601 KANSL3Q9P2N6 904 aa18.53■□□□□ 0.56
PTPRU-208ENST00000493601 IRAK3Q9Y616 596 aa18.53■□□□□ 0.56
PTPRU-208ENST00000493601 HOXA11P31270 313 aaPredicted RBP18.52■□□□□ 0.56
PTPRU-208ENST00000493601 TFDP1Q14186 410 aa18.52■□□□□ 0.56
PTPRU-208ENST00000493601 AGMOQ6ZNB7 445 aa18.52■□□□□ 0.56
PTPRU-208ENST00000493601 CNNM3Q8NE01 707 aa18.52■□□□□ 0.56
PTPRU-208ENST00000493601 BCL7CQ8WUZ0 217 aaPredicted RBP18.52■□□□□ 0.56
PTPRU-208ENST00000493601 FAM193BQ96PV7 902 aaPredicted RBP18.52■□□□□ 0.56
PTPRU-208ENST00000493601 EIF2AK1Q9BQI3 630 aaKnown RBP18.52■□□□□ 0.56
PTPRU-208ENST00000493601 ADAM7Q9H2U9 754 aa18.52■□□□□ 0.56
PTPRU-208ENST00000493601 DNAJB4Q9UDY4 337 aa18.52■□□□□ 0.56
PTPRU-208ENST00000493601 PIEZO1Q92508 2521 aa18.52■□□□□ 0.55
PTPRU-208ENST00000493601 ZBTB39O15060 712 aa18.51■□□□□ 0.55
PTPRU-208ENST00000493601 SLITRK3O94933 977 aa18.51■□□□□ 0.55
PTPRU-208ENST00000493601 LYPLA2O95372 231 aa18.51■□□□□ 0.55
PTPRU-208ENST00000493601 NCLP19338 710 aaKnown RBP18.51■□□□□ 0.55
PTPRU-208ENST00000493601 AXLP30530 894 aa18.51■□□□□ 0.55
PTPRU-208ENST00000493601 SLC11A1P49279 550 aa18.51■□□□□ 0.55
PTPRU-208ENST00000493601 NEK4P51957 841 aa18.51■□□□□ 0.55
PTPRU-208ENST00000493601 SIGLEC14Q08ET2 396 aa18.51■□□□□ 0.55
PTPRU-208ENST00000493601 NCBP1Q09161 790 aaKnown RBP18.51■□□□□ 0.55
PTPRU-208ENST00000493601 PTPN21Q16825 1174 aa18.51■□□□□ 0.55
PTPRU-208ENST00000493601 UBXN11Q5T124 520 aa18.51■□□□□ 0.55
PTPRU-208ENST00000493601 ERICH6BQ5W0A0 696 aa18.51■□□□□ 0.55
PTPRU-208ENST00000493601 NOTUMQ6P988 496 aa18.51■□□□□ 0.55
PTPRU-208ENST00000493601 DIS3L2Q8IYB7 885 aaKnown RBP18.51■□□□□ 0.55
PTPRU-208ENST00000493601 AUTS2Q8WXX7 1259 aa18.51■□□□□ 0.55
PTPRU-208ENST00000493601 PBXIP1Q96AQ6 731 aa18.51■□□□□ 0.55
PTPRU-208ENST00000493601 CCDC51Q96ER9 411 aa18.51■□□□□ 0.55
PTPRU-208ENST00000493601 FBXL18Q96ME1 805 aa18.51■□□□□ 0.55
PTPRU-208ENST00000493601 RIPOR3Q96MK2 946 aa18.51■□□□□ 0.55
PTPRU-208ENST00000493601 HSD17B14Q9BPX1 270 aa18.51■□□□□ 0.55
PTPRU-208ENST00000493601 TMEM175Q9BSA9 504 aa18.51■□□□□ 0.55
PTPRU-208ENST00000493601 TTC12Q9H892 705 aaPredicted RBP18.51■□□□□ 0.55
PTPRU-208ENST00000493601 UBN1Q9NPG3 1134 aa18.51■□□□□ 0.55
PTPRU-208ENST00000493601 TSHZ2Q9NRE2 1034 aa18.51■□□□□ 0.55
PTPRU-208ENST00000493601 ANKEF1Q9NU02 776 aa18.51■□□□□ 0.55
PTPRU-208ENST00000493601 BTBD18B2RXH4 712 aa18.5■□□□□ 0.55
PTPRU-208ENST00000493601 B4GALT3O60512 393 aa18.5■□□□□ 0.55
PTPRU-208ENST00000493601 TSPAN1O60635 241 aa18.5■□□□□ 0.55
PTPRU-208ENST00000493601 DGAT1O75907 488 aa18.5■□□□□ 0.55
PTPRU-208ENST00000493601 SP100P23497 879 aaPredicted RBP18.5■□□□□ 0.55
PTPRU-208ENST00000493601 MTHFRP42898 656 aa18.5■□□□□ 0.55
PTPRU-208ENST00000493601 PTENP60484 403 aa18.5■□□□□ 0.55
PTPRU-208ENST00000493601 PPFIBP1Q86W92 1011 aa18.5■□□□□ 0.55
PTPRU-208ENST00000493601 ZNF280BQ86YH2 543 aa18.5■□□□□ 0.55
PTPRU-208ENST00000493601 SUGP1Q8IWZ8 645 aaKnown RBP18.5■□□□□ 0.55
PTPRU-208ENST00000493601 XPNPEP1Q9NQW7 623 aa18.5■□□□□ 0.55
PTPRU-208ENST00000493601 KMT2EQ8IZD2 1858 aa18.5■□□□□ 0.55
PTPRU-208ENST00000493601 TDRD15B5MCY1 1934 aaKnown RBP18.49■□□□□ 0.55
PTPRU-208ENST00000493601 JAK2O60674 1132 aa18.49■□□□□ 0.55
PTPRU-208ENST00000493601 ITGA4P13612 1032 aa18.49■□□□□ 0.55
PTPRU-208ENST00000493601 TXKP42681 527 aa18.49■□□□□ 0.55
PTPRU-208ENST00000493601 FOSBP53539 338 aa18.49■□□□□ 0.55
PTPRU-208ENST00000493601 POU5F1BQ06416 359 aa18.49■□□□□ 0.55
PTPRU-208ENST00000493601 PTPN14Q15678 1187 aa18.49■□□□□ 0.55
PTPRU-208ENST00000493601 RARS2Q5T160 578 aaKnown RBP18.49■□□□□ 0.55
PTPRU-208ENST00000493601 ZBTB33Q86T24 672 aa18.49■□□□□ 0.55
PTPRU-208ENST00000493601 IFNLR1Q8IU57 520 aaPredicted RBP18.49■□□□□ 0.55
PTPRU-208ENST00000493601 VN1R3Q9BXE9 311 aa18.49■□□□□ 0.55
PTPRU-208ENST00000493601 EMILIN2Q9BXX0 1053 aa18.49■□□□□ 0.55
PTPRU-208ENST00000493601 POMKQ9H5K3 350 aa18.49■□□□□ 0.55
PTPRU-208ENST00000493601 IPPQ9Y573 584 aa18.49■□□□□ 0.55
PTPRU-208ENST00000493601 DENND4AQ7Z401 1863 aa18.49■□□□□ 0.55
PTPRU-208ENST00000493601 INO80B-WBP1J3KQ70 363 aa18.48■□□□□ 0.55
PTPRU-208ENST00000493601 DDHD2O94830 711 aa18.48■□□□□ 0.55
PTPRU-208ENST00000493601 POMCP01189 267 aa18.48■□□□□ 0.55
PTPRU-208ENST00000493601 ALDH2P05091 517 aa18.48■□□□□ 0.55
PTPRU-208ENST00000493601 EPCAMP16422 314 aa18.48■□□□□ 0.55
PTPRU-208ENST00000493601 RARRES1P49788 294 aa18.48■□□□□ 0.55
PTPRU-208ENST00000493601 NHLH1Q02575 133 aa18.48■□□□□ 0.55
PTPRU-208ENST00000493601 CAPSQ13938 189 aa18.48■□□□□ 0.55
PTPRU-208ENST00000493601 KIAA1841Q6NSI8 718 aa18.48■□□□□ 0.55
PTPRU-208ENST00000493601 CABP7Q86V35 215 aa18.48■□□□□ 0.55
PTPRU-208ENST00000493601 HACE1Q8IYU2 909 aa18.48■□□□□ 0.55
PTPRU-208ENST00000493601 FBXL6Q8N531 539 aa18.48■□□□□ 0.55
PTPRU-208ENST00000493601 SMG8Q8ND04 991 aaKnown RBP18.48■□□□□ 0.55
PTPRU-208ENST00000493601 MTMR9Q96QG7 549 aa18.48■□□□□ 0.55
PTPRU-208ENST00000493601 NFKBIZQ9BYH8 718 aa18.48■□□□□ 0.55
PTPRU-208ENST00000493601 CSRNP2Q9H175 543 aa18.48■□□□□ 0.55
PTPRU-208ENST00000493601 CDH22Q9UJ99 828 aa18.48■□□□□ 0.55
PTPRU-208ENST00000493601 FAN1Q9Y2M0 1017 aa18.48■□□□□ 0.55
PTPRU-208ENST00000493601 INPPL1O15357 1258 aa18.47■□□□□ 0.55
PTPRU-208ENST00000493601 ARL2P36404 184 aa18.47■□□□□ 0.55
PTPRU-208ENST00000493601 AFF1P51825 1210 aaKnown RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms