RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 FAM26DQ5JW98 314 aa18.91■□□□□ 0.62
LIME1-208ENST00000493265 FBXO47Q5MNV8 452 aa18.91■□□□□ 0.62
LIME1-208ENST00000493265 CDCA2Q69YH5 1023 aaPredicted RBP18.91■□□□□ 0.62
LIME1-208ENST00000493265 CATSPER4Q7RTX7 472 aa18.91■□□□□ 0.62
LIME1-208ENST00000493265 ZNF720Q7Z2F6 126 aa18.91■□□□□ 0.62
LIME1-208ENST00000493265 SRGAP1Q7Z6B7 1085 aa18.91■□□□□ 0.62
LIME1-208ENST00000493265 SPATA20Q8TB22 786 aa18.91■□□□□ 0.62
LIME1-208ENST00000493265 FIZ1Q96SL8 496 aa18.91■□□□□ 0.62
LIME1-208ENST00000493265 NTPCRQ9BSD7 190 aaKnown RBP18.91■□□□□ 0.62
LIME1-208ENST00000493265 WNT8AQ9H1J5 351 aa18.91■□□□□ 0.62
LIME1-208ENST00000493265 H0YCG3 227 aa18.9■□□□□ 0.62
LIME1-208ENST00000493265 RPS6KA5O75582 802 aa18.9■□□□□ 0.62
LIME1-208ENST00000493265 TIMP1P01033 207 aa18.9■□□□□ 0.62
LIME1-208ENST00000493265 PRKCBP05771 671 aa18.9■□□□□ 0.62
LIME1-208ENST00000493265 CD52P31358 61 aa18.9■□□□□ 0.62
LIME1-208ENST00000493265 EFNA5P52803 228 aa18.9■□□□□ 0.62
LIME1-208ENST00000493265 MBTD1Q05BQ5 628 aa18.9■□□□□ 0.62
LIME1-208ENST00000493265 POU5F1BQ06416 359 aa18.9■□□□□ 0.62
LIME1-208ENST00000493265 NFX1Q12986 1120 aaKnown RBP18.9■□□□□ 0.62
LIME1-208ENST00000493265 STRN3Q13033 797 aa18.9■□□□□ 0.62
LIME1-208ENST00000493265 LPIN1Q14693 890 aa18.9■□□□□ 0.62
LIME1-208ENST00000493265 MBTPS1Q14703 1052 aa18.9■□□□□ 0.62
LIME1-208ENST00000493265 NT5DC1Q5TFE4 455 aa18.9■□□□□ 0.62
LIME1-208ENST00000493265 DEFB128Q7Z7B8 93 aa18.9■□□□□ 0.62
LIME1-208ENST00000493265 NELFCDQ8IXH7 590 aa18.9■□□□□ 0.62
LIME1-208ENST00000493265 ZNF710Q8N1W2 664 aa18.9■□□□□ 0.62
LIME1-208ENST00000493265 KIAA0895Q8NCT3 520 aa18.9■□□□□ 0.62
LIME1-208ENST00000493265 ARHGAP28Q9P2N2 729 aa18.9■□□□□ 0.62
LIME1-208ENST00000493265 PCDHB13Q9Y5F0 798 aa18.9■□□□□ 0.62
LIME1-208ENST00000493265 SIP14410 1827 aa18.9■□□□□ 0.62
LIME1-208ENST00000493265 SYCE3A1L190 88 aa18.89■□□□□ 0.61
LIME1-208ENST00000493265 ERLIN2O94905 339 aa18.89■□□□□ 0.61
LIME1-208ENST00000493265 SFPQP23246 707 aaKnown RBP eCLIP18.89■□□□□ 0.61
LIME1-208ENST00000493265 KCNA1Q09470 495 aa18.89■□□□□ 0.61
LIME1-208ENST00000493265 PAK2Q13177 524 aa18.89■□□□□ 0.61
LIME1-208ENST00000493265 MORC3Q14149 939 aa18.89■□□□□ 0.61
LIME1-208ENST00000493265 MAPK6Q16659 721 aa18.89■□□□□ 0.61
LIME1-208ENST00000493265 ZNF658Q5TYW1 1059 aaPredicted RBP18.89■□□□□ 0.61
LIME1-208ENST00000493265 SASS6Q6UVJ0 657 aa18.89■□□□□ 0.61
LIME1-208ENST00000493265 STXBP4Q6ZWJ1 553 aa18.89■□□□□ 0.61
LIME1-208ENST00000493265 TAS1R3Q7RTX0 852 aa18.89■□□□□ 0.61
LIME1-208ENST00000493265 FAM228AQ86W67 206 aa18.89■□□□□ 0.61
LIME1-208ENST00000493265 BICD1Q96G01 975 aa18.89■□□□□ 0.61
LIME1-208ENST00000493265 CCDC113Q9H0I3 377 aa18.89■□□□□ 0.61
LIME1-208ENST00000493265 IKZF4Q9H2S9 585 aa18.89■□□□□ 0.61
LIME1-208ENST00000493265 AGO3Q9H9G7 860 aaKnown RBP18.89■□□□□ 0.61
LIME1-208ENST00000493265 TBX20Q9UMR3 447 aa18.89■□□□□ 0.61
LIME1-208ENST00000493265 PHLPP2Q6ZVD8 1323 aa18.89■□□□□ 0.61
LIME1-208ENST00000493265 SPTBN5Q9NRC6 3674 aaKnown RBP18.89■□□□□ 0.61
LIME1-208ENST00000493265 B4GALT5O43286 388 aa18.88■□□□□ 0.61
LIME1-208ENST00000493265 NBNO60934 754 aa18.88■□□□□ 0.61
LIME1-208ENST00000493265 BMP6P22004 513 aa18.88■□□□□ 0.61
LIME1-208ENST00000493265 DNAJB2P25686 324 aa18.88■□□□□ 0.61
LIME1-208ENST00000493265 GTF2BQ00403 316 aa18.88■□□□□ 0.61
LIME1-208ENST00000493265 PRPF4BQ13523 1007 aaKnown RBP18.88■□□□□ 0.61
LIME1-208ENST00000493265 ZSCAN23Q3MJ62 389 aa18.88■□□□□ 0.61
LIME1-208ENST00000493265 RBM43Q6ZSC3 357 aaKnown RBP18.88■□□□□ 0.61
LIME1-208ENST00000493265 TSHZ1Q6ZSZ6 1077 aa18.88■□□□□ 0.61
LIME1-208ENST00000493265 IFNLR1Q8IU57 520 aaPredicted RBP18.88■□□□□ 0.61
LIME1-208ENST00000493265 SYCP3Q8IZU3 236 aa18.88■□□□□ 0.61
LIME1-208ENST00000493265 CPB2Q96IY4 423 aa18.88■□□□□ 0.61
LIME1-208ENST00000493265 ACCSQ96QU6 501 aa18.88■□□□□ 0.61
LIME1-208ENST00000493265 NFKBIZQ9BYH8 718 aa18.88■□□□□ 0.61
LIME1-208ENST00000493265 TMEM134Q9H6X4 195 aa18.88■□□□□ 0.61
LIME1-208ENST00000493265 PRMT7Q9NVM4 692 aaPredicted RBP18.88■□□□□ 0.61
LIME1-208ENST00000493265 ST3GAL5Q9UNP4 418 aa18.88■□□□□ 0.61
LIME1-208ENST00000493265 TMEM265A0A087WTH1 108 aa18.87■□□□□ 0.61
LIME1-208ENST00000493265 TTLL13PA6NNM8 815 aa18.87■□□□□ 0.61
LIME1-208ENST00000493265 EDN1P05305 212 aa18.87■□□□□ 0.61
LIME1-208ENST00000493265 IBSPP21815 317 aaPredicted RBP18.87■□□□□ 0.61
LIME1-208ENST00000493265 GRIN2CQ14957 1233 aa18.87■□□□□ 0.61
LIME1-208ENST00000493265 EPM2AIP1Q7L775 607 aaPredicted RBP18.87■□□□□ 0.61
LIME1-208ENST00000493265 CDR2LQ86X02 465 aaPredicted RBP18.87■□□□□ 0.61
LIME1-208ENST00000493265 MYOCDQ8IZQ8 938 aa18.87■□□□□ 0.61
LIME1-208ENST00000493265 TRIML1Q8N9V2 468 aa18.87■□□□□ 0.61
LIME1-208ENST00000493265 SCFD1Q8WVM8 642 aa18.87■□□□□ 0.61
LIME1-208ENST00000493265 TANC1Q9C0D5 1861 aa18.87■□□□□ 0.61
LIME1-208ENST00000493265 FZD8Q9H461 694 aa18.87■□□□□ 0.61
LIME1-208ENST00000493265 ST6GALNAC4Q9H4F1 302 aa18.87■□□□□ 0.61
LIME1-208ENST00000493265 PADI3Q9ULW8 664 aa18.87■□□□□ 0.61
LIME1-208ENST00000493265 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.86■□□□□ 0.61
LIME1-208ENST00000493265 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.86■□□□□ 0.61
LIME1-208ENST00000493265 GPR182O15218 404 aa18.86■□□□□ 0.61
LIME1-208ENST00000493265 EIF3DO15371 548 aaKnown RBP eCLIP18.86■□□□□ 0.61
LIME1-208ENST00000493265 TSPAN1O60635 241 aa18.86■□□□□ 0.61
LIME1-208ENST00000493265 PPP1R37O75864 691 aa18.86■□□□□ 0.61
LIME1-208ENST00000493265 LETM1O95202 739 aaPredicted RBP18.86■□□□□ 0.61
LIME1-208ENST00000493265 CSF2RAP15509 400 aa18.86■□□□□ 0.61
LIME1-208ENST00000493265 PRCPP42785 496 aa18.86■□□□□ 0.61
LIME1-208ENST00000493265 MATR3P43243 847 aaKnown RBP eCLIP18.86■□□□□ 0.61
LIME1-208ENST00000493265 NLRP12P59046 1061 aa18.86■□□□□ 0.61
LIME1-208ENST00000493265 NCBP1Q09161 790 aaKnown RBP18.86■□□□□ 0.61
LIME1-208ENST00000493265 ALCAMQ13740 583 aa18.86■□□□□ 0.61
LIME1-208ENST00000493265 GPNMBQ14956 572 aa18.86■□□□□ 0.61
LIME1-208ENST00000493265 KLHL10Q6JEL2 608 aa18.86■□□□□ 0.61
LIME1-208ENST00000493265 MFSD5Q6N075 450 aa18.86■□□□□ 0.61
LIME1-208ENST00000493265 TMEM199Q8N511 208 aa18.86■□□□□ 0.61
LIME1-208ENST00000493265 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.86■□□□□ 0.616e-8■■■■□ 20.1
LIME1-208ENST00000493265 TARS2Q9BW92 718 aaKnown RBP18.86■□□□□ 0.61
LIME1-208ENST00000493265 STRA6Q9BX79 667 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms