RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 TMX3Q96JJ7 454 aa12.77□□□□□ -0.37
LRTM1-202ENST00000493075 TCF25Q9BQ70 676 aa12.77□□□□□ -0.37
LRTM1-202ENST00000493075 TBC1D13Q9NVG8 400 aa12.77□□□□□ -0.37
LRTM1-202ENST00000493075 DAXXQ9UER7 740 aaPredicted RBP12.77□□□□□ -0.37
LRTM1-202ENST00000493075 CNTNAP2Q9UHC6 1331 aa12.77□□□□□ -0.37
LRTM1-202ENST00000493075 LAD1O00515 517 aa12.76□□□□□ -0.37
LRTM1-202ENST00000493075 TSPAN1O60635 241 aa12.76□□□□□ -0.37
LRTM1-202ENST00000493075 GALTP07902 379 aa12.76□□□□□ -0.37
LRTM1-202ENST00000493075 TOB1P50616 345 aaPredicted RBP12.76□□□□□ -0.37
LRTM1-202ENST00000493075 MBTD1Q05BQ5 628 aa12.76□□□□□ -0.37
LRTM1-202ENST00000493075 CAPSQ13938 189 aa12.76□□□□□ -0.37
LRTM1-202ENST00000493075 KCNC3Q14003 757 aa12.76□□□□□ -0.37
LRTM1-202ENST00000493075 BMS1Q14692 1282 aaKnown RBP12.76□□□□□ -0.37
LRTM1-202ENST00000493075 HAUS3Q68CZ6 603 aa12.76□□□□□ -0.37
LRTM1-202ENST00000493075 NOTUMQ6P988 496 aa12.76□□□□□ -0.37
LRTM1-202ENST00000493075 TMC7Q7Z402 723 aa12.76□□□□□ -0.37
LRTM1-202ENST00000493075 MRPL43Q8N983 215 aaKnown RBP12.76□□□□□ -0.37
LRTM1-202ENST00000493075 URGCPQ8TCY9 931 aa12.76□□□□□ -0.37
LRTM1-202ENST00000493075 ASAP3Q8TDY4 903 aa12.76□□□□□ -0.37
LRTM1-202ENST00000493075 NRDE2Q9H7Z3 1164 aa12.76□□□□□ -0.37
LRTM1-202ENST00000493075 ENTPD7Q9NQZ7 604 aa12.76□□□□□ -0.37
LRTM1-202ENST00000493075 STK39Q9UEW8 545 aa12.76□□□□□ -0.37
LRTM1-202ENST00000493075 PCDHGC5Q9Y5F6 944 aa12.76□□□□□ -0.37
LRTM1-202ENST00000493075 A0A087WWV3 80 aa12.75□□□□□ -0.37
LRTM1-202ENST00000493075 MEIS3P2A8K0S8 358 aa12.75□□□□□ -0.37
LRTM1-202ENST00000493075 INO80B-WBP1J3KQ70 363 aa12.75□□□□□ -0.37
LRTM1-202ENST00000493075 PER2O15055 1255 aa12.75□□□□□ -0.37
LRTM1-202ENST00000493075 INPPL1O15357 1258 aa12.75□□□□□ -0.37
LRTM1-202ENST00000493075 USO1O60763 962 aaKnown RBP12.75□□□□□ -0.37
LRTM1-202ENST00000493075 GLP2RO95838 553 aa12.75□□□□□ -0.37
LRTM1-202ENST00000493075 ALDH2P05091 517 aa12.75□□□□□ -0.37
LRTM1-202ENST00000493075 CYP11B2P19099 503 aa12.75□□□□□ -0.37
LRTM1-202ENST00000493075 PBX3P40426 434 aa12.75□□□□□ -0.37
LRTM1-202ENST00000493075 ZP2Q05996 745 aa12.75□□□□□ -0.37
LRTM1-202ENST00000493075 PTGDRQ13258 359 aa12.75□□□□□ -0.37
LRTM1-202ENST00000493075 SMC1AQ14683 1233 aaKnown RBP12.75□□□□□ -0.37
LRTM1-202ENST00000493075 AMHR2Q16671 573 aa12.75□□□□□ -0.37
LRTM1-202ENST00000493075 DDX53Q86TM3 631 aaKnown RBP12.75□□□□□ -0.37
LRTM1-202ENST00000493075 IGSF22Q8N9C0 903 aa12.75□□□□□ -0.37
LRTM1-202ENST00000493075 SMRP1Q8NCR6 262 aa12.75□□□□□ -0.37
LRTM1-202ENST00000493075 SMG8Q8ND04 991 aaKnown RBP12.75□□□□□ -0.37
LRTM1-202ENST00000493075 TMEM169Q96HH4 297 aa12.75□□□□□ -0.37
LRTM1-202ENST00000493075 POP1Q99575 1024 aaKnown RBP12.75□□□□□ -0.37
LRTM1-202ENST00000493075 TMEM175Q9BSA9 504 aa12.75□□□□□ -0.37
LRTM1-202ENST00000493075 RAB34Q9BZG1 259 aa12.75□□□□□ -0.37
LRTM1-202ENST00000493075 CSRNP2Q9H175 543 aa12.75□□□□□ -0.37
LRTM1-202ENST00000493075 POLR3FQ9H1D9 316 aaPredicted RBP12.75□□□□□ -0.37
LRTM1-202ENST00000493075 EPHX3Q9H6B9 360 aa12.75□□□□□ -0.37
LRTM1-202ENST00000493075 RSAD1Q9HA92 442 aa12.75□□□□□ -0.37
LRTM1-202ENST00000493075 LRWD1Q9UFC0 647 aa12.75□□□□□ -0.37
LRTM1-202ENST00000493075 IRAK3Q9Y616 596 aa12.75□□□□□ -0.37
LRTM1-202ENST00000493075 LOXHD1Q8IVV2 1947 aa12.75□□□□□ -0.37
LRTM1-202ENST00000493075 NLRC5Q86WI3 1866 aa12.75□□□□□ -0.37
LRTM1-202ENST00000493075 A0A1B0GUA9 196 aa12.74□□□□□ -0.37
LRTM1-202ENST00000493075 ARHGEF35A5YM69 484 aa12.74□□□□□ -0.37
LRTM1-202ENST00000493075 HIDE1A8MVS5 230 aa12.74□□□□□ -0.37
LRTM1-202ENST00000493075 NT5C1B-RDH14C9J2C7 533 aa12.74□□□□□ -0.37
LRTM1-202ENST00000493075 ZC3H11AO75152 810 aaKnown RBP eCLIP12.74□□□□□ -0.37
LRTM1-202ENST00000493075 CXCL14O95715 111 aa12.74□□□□□ -0.37
LRTM1-202ENST00000493075 SRGAP2BP0DMP2 458 aa12.74□□□□□ -0.37
LRTM1-202ENST00000493075 ITGA4P13612 1032 aa12.74□□□□□ -0.37
LRTM1-202ENST00000493075 ALADP13716 330 aa12.74□□□□□ -0.37
LRTM1-202ENST00000493075 SSTR3P32745 418 aaPredicted RBP12.74□□□□□ -0.37
LRTM1-202ENST00000493075 PRPHP41219 470 aa12.74□□□□□ -0.37
LRTM1-202ENST00000493075 RNASELQ05823 741 aaKnown RBP12.74□□□□□ -0.37
LRTM1-202ENST00000493075 GIT2Q14161 759 aa12.74□□□□□ -0.37
LRTM1-202ENST00000493075 CLUL1Q15846 466 aa12.74□□□□□ -0.37
LRTM1-202ENST00000493075 FAM187BQ17R55 369 aa12.74□□□□□ -0.37
LRTM1-202ENST00000493075 LONRF3Q496Y0 759 aa12.74□□□□□ -0.37
LRTM1-202ENST00000493075 RILPL1Q5EBL4 403 aa12.74□□□□□ -0.37
LRTM1-202ENST00000493075 PLPP4Q5VZY2 271 aa12.74□□□□□ -0.37
LRTM1-202ENST00000493075 PADI6Q6TGC4 694 aa12.74□□□□□ -0.37
LRTM1-202ENST00000493075 IGSF21Q96ID5 467 aa12.74□□□□□ -0.37
LRTM1-202ENST00000493075 PRIMPOLQ96LW4 560 aa12.74□□□□□ -0.37
LRTM1-202ENST00000493075 TBC1D32Q96NH3 1257 aa12.74□□□□□ -0.37
LRTM1-202ENST00000493075 FZD8Q9H461 694 aa12.74□□□□□ -0.37
LRTM1-202ENST00000493075 INPP5FQ9Y2H2 1132 aa12.74□□□□□ -0.37
LRTM1-202ENST00000493075 IPPQ9Y573 584 aa12.74□□□□□ -0.37
LRTM1-202ENST00000493075 PCDHB6Q9Y5E3 794 aa12.74□□□□□ -0.37
LRTM1-202ENST00000493075 WDR81Q562E7 1941 aa12.73□□□□□ -0.37
LRTM1-202ENST00000493075 C2orf71A6NGG8 1288 aa12.73□□□□□ -0.37
LRTM1-202ENST00000493075 GPR37L1O60883 481 aa12.73□□□□□ -0.37
LRTM1-202ENST00000493075 CTSAP10619 480 aa12.73□□□□□ -0.37
LRTM1-202ENST00000493075 HOXB8P17481 243 aaPredicted RBP12.73□□□□□ -0.37
LRTM1-202ENST00000493075 ARF4P18085 180 aaPredicted RBP12.73□□□□□ -0.37
LRTM1-202ENST00000493075 CCT6AP40227 531 aaKnown RBP12.73□□□□□ -0.37
LRTM1-202ENST00000493075 NBR1Q14596 966 aa12.73□□□□□ -0.37
LRTM1-202ENST00000493075 CDCA2Q69YH5 1023 aaPredicted RBP12.73□□□□□ -0.37
LRTM1-202ENST00000493075 POTEGQ6S5H5 508 aa12.73□□□□□ -0.37
LRTM1-202ENST00000493075 ZNF280BQ86YH2 543 aa12.73□□□□□ -0.37
LRTM1-202ENST00000493075 HACE1Q8IYU2 909 aa12.73□□□□□ -0.37
LRTM1-202ENST00000493075 VPS52Q8N1B4 723 aa12.73□□□□□ -0.37
LRTM1-202ENST00000493075 VN1R2Q8NFZ6 395 aa12.73□□□□□ -0.37
LRTM1-202ENST00000493075 KHSRPQ92945 711 aaKnown RBP eCLIP12.73□□□□□ -0.37
LRTM1-202ENST00000493075 CPB2Q96IY4 423 aa12.73□□□□□ -0.37
LRTM1-202ENST00000493075 FAM193BQ96PV7 902 aaPredicted RBP12.73□□□□□ -0.37
LRTM1-202ENST00000493075 EIF2AQ9BY44 585 aaKnown RBP12.73□□□□□ -0.37
LRTM1-202ENST00000493075 C2orf40Q9H1Z8 148 aa12.73□□□□□ -0.37
LRTM1-202ENST00000493075 GPRC5CQ9NQ84 441 aa12.73□□□□□ -0.37
LRTM1-202ENST00000493075 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms