RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 EIF2AQ9BY44 585 aaKnown RBP13.09□□□□□ -0.31
MDC1-207ENST00000492462 RNF39Q9H2S5 420 aa13.09□□□□□ -0.31
MDC1-207ENST00000492462 TBC1D13Q9NVG8 400 aa13.09□□□□□ -0.31
MDC1-207ENST00000492462 INPP5FQ9Y2H2 1132 aa13.09□□□□□ -0.31
MDC1-207ENST00000492462 ARHGEF35A5YM69 484 aa13.08□□□□□ -0.32
MDC1-207ENST00000492462 H3BQV1 296 aa13.08□□□□□ -0.32
MDC1-207ENST00000492462 PER2O15055 1255 aa13.08□□□□□ -0.32
MDC1-207ENST00000492462 ERLIN2O94905 339 aa13.08□□□□□ -0.32
MDC1-207ENST00000492462 NRIP1P48552 1158 aa13.08□□□□□ -0.32
MDC1-207ENST00000492462 RAB27AP51159 221 aa13.08□□□□□ -0.32
MDC1-207ENST00000492462 CUL4AQ13619 759 aa13.08□□□□□ -0.32
MDC1-207ENST00000492462 TFDP1Q14186 410 aa13.08□□□□□ -0.32
MDC1-207ENST00000492462 CLUL1Q15846 466 aa13.08□□□□□ -0.32
MDC1-207ENST00000492462 LARP1BQ659C4 914 aaKnown RBP13.08□□□□□ -0.32
MDC1-207ENST00000492462 PTCRAQ6ISU1 281 aaPredicted RBP13.08□□□□□ -0.32
MDC1-207ENST00000492462 MRPL10Q7Z7H8 261 aaKnown RBP13.08□□□□□ -0.32
MDC1-207ENST00000492462 SLC39A11Q8N1S5 342 aa13.08□□□□□ -0.32
MDC1-207ENST00000492462 SMG8Q8ND04 991 aaKnown RBP13.08□□□□□ -0.32
MDC1-207ENST00000492462 MICAL1Q8TDZ2 1067 aa13.08□□□□□ -0.32
MDC1-207ENST00000492462 SNX29Q8TEQ0 813 aa13.08□□□□□ -0.32
MDC1-207ENST00000492462 MRPS27Q92552 414 aaKnown RBP13.08□□□□□ -0.32
MDC1-207ENST00000492462 MMTAG2Q9BU76 263 aaKnown RBP13.08□□□□□ -0.32
MDC1-207ENST00000492462 NRDE2Q9H7Z3 1164 aa13.08□□□□□ -0.32
MDC1-207ENST00000492462 CD320Q9NPF0 282 aa13.08□□□□□ -0.32
MDC1-207ENST00000492462 TLR9Q9NR96 1032 aa13.08□□□□□ -0.32
MDC1-207ENST00000492462 DDX19AQ9NUU7 478 aaKnown RBP13.08□□□□□ -0.32
MDC1-207ENST00000492462 KIAA1024Q9UPX6 916 aa13.08□□□□□ -0.32
MDC1-207ENST00000492462 USP20Q9Y2K6 914 aa13.08□□□□□ -0.32
MDC1-207ENST00000492462 HES2Q9Y543 173 aa13.08□□□□□ -0.32
MDC1-207ENST00000492462 CACNA1GO43497 2377 aa13.07□□□□□ -0.32
MDC1-207ENST00000492462 GRXCR2A6NFK2 248 aa13.07□□□□□ -0.32
MDC1-207ENST00000492462 LRRIQ4A6NIV6 560 aa13.07□□□□□ -0.32
MDC1-207ENST00000492462 TTLL13PA6NNM8 815 aa13.07□□□□□ -0.32
MDC1-207ENST00000492462 E9PMD0 336 aa13.07□□□□□ -0.32
MDC1-207ENST00000492462 FSCN2O14926 492 aa13.07□□□□□ -0.32
MDC1-207ENST00000492462 SKIP12755 728 aa13.07□□□□□ -0.32
MDC1-207ENST00000492462 ARF4P18085 180 aaPredicted RBP13.07□□□□□ -0.32
MDC1-207ENST00000492462 CYP11B2P19099 503 aa13.07□□□□□ -0.32
MDC1-207ENST00000492462 BCAR1P56945 870 aa13.07□□□□□ -0.32
MDC1-207ENST00000492462 ATP2C1P98194 919 aaPredicted RBP13.07□□□□□ -0.32
MDC1-207ENST00000492462 PLCB3Q01970 1234 aa13.07□□□□□ -0.32
MDC1-207ENST00000492462 UBE3AQ05086 875 aa13.07□□□□□ -0.32
MDC1-207ENST00000492462 POU5F1BQ06416 359 aa13.07□□□□□ -0.32
MDC1-207ENST00000492462 ADAM15Q13444 863 aa13.07□□□□□ -0.32
MDC1-207ENST00000492462 PDIA5Q14554 519 aa13.07□□□□□ -0.32
MDC1-207ENST00000492462 RILPL1Q5EBL4 403 aa13.07□□□□□ -0.32
MDC1-207ENST00000492462 NOMO2Q5JPE7 1267 aa13.07□□□□□ -0.32
MDC1-207ENST00000492462 HAUS3Q68CZ6 603 aa13.07□□□□□ -0.32
MDC1-207ENST00000492462 GLB1LQ6UWU2 654 aa13.07□□□□□ -0.32
MDC1-207ENST00000492462 KCNK18Q7Z418 384 aa13.07□□□□□ -0.32
MDC1-207ENST00000492462 ZNF280BQ86YH2 543 aa13.07□□□□□ -0.32
MDC1-207ENST00000492462 MCPH1Q8NEM0 835 aa13.07□□□□□ -0.32
MDC1-207ENST00000492462 VN1R2Q8NFZ6 395 aa13.07□□□□□ -0.32
MDC1-207ENST00000492462 BCL7CQ8WUZ0 217 aaPredicted RBP13.07□□□□□ -0.32
MDC1-207ENST00000492462 MRPL9Q9BYD2 267 aaKnown RBP13.07□□□□□ -0.32
MDC1-207ENST00000492462 GBP3Q9H0R5 595 aa13.07□□□□□ -0.32
MDC1-207ENST00000492462 BHMT2Q9H2M3 363 aa13.07□□□□□ -0.32
MDC1-207ENST00000492462 SPG21Q9NZD8 308 aa13.07□□□□□ -0.32
MDC1-207ENST00000492462 DNAJB4Q9UDY4 337 aa13.07□□□□□ -0.32
MDC1-207ENST00000492462 IPPQ9Y573 584 aa13.07□□□□□ -0.32
MDC1-207ENST00000492462 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.07□□□□□ -0.32
MDC1-207ENST00000492462 SPTBN4Q9H254 2564 aa13.06□□□□□ -0.32
MDC1-207ENST00000492462 HIDE1A8MVS5 230 aa13.06□□□□□ -0.32
MDC1-207ENST00000492462 PRR33A8MZF0 331 aa13.06□□□□□ -0.32
MDC1-207ENST00000492462 ZC3H11AO75152 810 aaKnown RBP eCLIP13.06□□□□□ -0.32
MDC1-207ENST00000492462 DDHD2O94830 711 aa13.06□□□□□ -0.32
MDC1-207ENST00000492462 GLP2RO95838 553 aa13.06□□□□□ -0.32
MDC1-207ENST00000492462 EDN1P05305 212 aa13.06□□□□□ -0.32
MDC1-207ENST00000492462 NCLP19338 710 aaKnown RBP13.06□□□□□ -0.32
MDC1-207ENST00000492462 PRPHP41219 470 aa13.06□□□□□ -0.32
MDC1-207ENST00000492462 CSPP1Q1MSJ5 1256 aa13.06□□□□□ -0.32
MDC1-207ENST00000492462 PLPP4Q5VZY2 271 aa13.06□□□□□ -0.32
MDC1-207ENST00000492462 DTHD1Q6ZMT9 781 aa13.06□□□□□ -0.32
MDC1-207ENST00000492462 PGBD4Q96DM1 585 aa13.06□□□□□ -0.32
MDC1-207ENST00000492462 TCF25Q9BQ70 676 aa13.06□□□□□ -0.32
MDC1-207ENST00000492462 KIFC3Q9BVG8 833 aa13.06□□□□□ -0.32
MDC1-207ENST00000492462 NFKBIZQ9BYH8 718 aa13.06□□□□□ -0.32
MDC1-207ENST00000492462 CSRNP2Q9H175 543 aa13.06□□□□□ -0.32
MDC1-207ENST00000492462 TLE6Q9H808 572 aa13.06□□□□□ -0.32
MDC1-207ENST00000492462 RSAD1Q9HA92 442 aa13.06□□□□□ -0.32
MDC1-207ENST00000492462 CLEC1BQ9P126 229 aa13.06□□□□□ -0.32
MDC1-207ENST00000492462 TDRD15B5MCY1 1934 aaKnown RBP13.05□□□□□ -0.32
MDC1-207ENST00000492462 PI4K2BG5E9Z4 385 aa13.05□□□□□ -0.32
MDC1-207ENST00000492462 LAD1O00515 517 aa13.05□□□□□ -0.32
MDC1-207ENST00000492462 NCK2O43639 380 aa13.05□□□□□ -0.32
MDC1-207ENST00000492462 POMCP01189 267 aa13.05□□□□□ -0.32
MDC1-207ENST00000492462 GALTP07902 379 aa13.05□□□□□ -0.32
MDC1-207ENST00000492462 ITGA4P13612 1032 aa13.05□□□□□ -0.32
MDC1-207ENST00000492462 MUTP22033 750 aa13.05□□□□□ -0.32
MDC1-207ENST00000492462 PPM1AP35813 382 aa13.05□□□□□ -0.32
MDC1-207ENST00000492462 SLC11A1P49279 550 aa13.05□□□□□ -0.32
MDC1-207ENST00000492462 ZRSR1Q15695 479 aaKnown RBP13.05□□□□□ -0.32
MDC1-207ENST00000492462 CDCA2Q69YH5 1023 aaPredicted RBP13.05□□□□□ -0.32
MDC1-207ENST00000492462 NOTUMQ6P988 496 aa13.05□□□□□ -0.32
MDC1-207ENST00000492462 EFHBQ8N7U6 833 aa13.05□□□□□ -0.32
MDC1-207ENST00000492462 FBXL18Q96ME1 805 aa13.05□□□□□ -0.32
MDC1-207ENST00000492462 ZFP42Q96MM3 310 aa13.05□□□□□ -0.32
MDC1-207ENST00000492462 PNMA5Q96PV4 448 aa13.05□□□□□ -0.32
MDC1-207ENST00000492462 GAD1Q99259 594 aa13.05□□□□□ -0.32
MDC1-207ENST00000492462 PLIN2Q99541 437 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms